Gadus morhua (Atlantic cod): 115532011
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Entry
115532011 CDS
T10832
Name
(RefSeq) tetratricopeptide repeat protein 30A-like
KO
K19683
tetratricopeptide repeat protein 30
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmh03037
]
115532011
Cilium and associated proteins [BR:
gmh03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
115532011
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_12
ANAPC3
TPR_CcmH_CycH
TPR_Slam
ARM_TT21_C
TPR_16
ARM_TT21_5th
TPR_6
TPR_EMC2
SRP_TPR_like
BEX
Motif
Other DBs
NCBI-GeneID:
115532011
NCBI-ProteinID:
XP_030197290
Ensembl:
ENSGMOG00000009584
LinkDB
All DBs
Position
2:611252..622640
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AA seq
660 aa
AA seq
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MTPTVIKDGEYTATIYRLIKECRYGDAIVILNHQLEKHMKSRAALSLLGYCCFHTQDFST
AADCYEQLSLLHPEVEEYRLYHAQALARACCYPEAMKASFLLDNPSTYTRMIKLQAAIKY
GEEEYSAAKALVEQLPQEEPDYEVKMACLLYREEQYEEARRRFTSAQQALGYQPDLSYNM
ALCYYSMKNYSAALKHIAEIIERGIREHPELSVGMTTEGVEVRSVGNTLTLQQTALIEAF
NLKAAVQFQLRNLEGAQDALTDMPPPDRRGEEELDPVTLHNQALLNMERRPSEGFEKLAF
LLQQDPFPPVTFGNLLLLYCKYEYFDLAADVLAENAHLTYRFLSPYLYEFLDAMLTCQTA
PEEAFRKFDDMNGKLTEQLRKLAKQVQDFRLARDDQGLKKGVQEYDQLLERYIPVLMAQA
KIYWSRDNFQMVEKIFRKSVEICNEHDTWKLNVAHVLFMQENKYKEAIGFYEPIVKKHYD
NILNVSAVVLANLCVSYIMTSQNEEAEELMRKIEKEEEQISYDAPDKKVFHLCIVNLVIG
TLYCAKGNYDFGISRVIKSLEPYNKKLGTDTWFYAKRCVLSLLENMSKHMILLRDAVVQD
CLLFLERCEVYGREEPAVIQAPLQDERSSSSSSSSLGRNSVTYEARLLKALFYQVIGWNE
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgacccccacggtcatcaaggacggagaatacactgcgaccatctaccgcctgatcaaa
gagtgtcgctatggagacgctatcgtgatcctcaaccaccagctggagaaacacatgaag
tcccgggcggccctgtccctgctgggctactgctgcttccacacgcaggacttcagcacg
gcggccgactgctacgagcagctcagcctgctgcaccccgaggtggaggagtaccggctg
taccacgcccaggccctggcccgcgcctgctgctacccggaggccatgaaggccagcttc
ctgctggacaaccccagcacctataccaggatgatcaagctacaggctgctatcaaatac
ggagaggaagagtattccgctgctaaggccctggtggagcagctgccccaggaggagccg
gactacgaggtgaagatggcctgcctcctctaccgcgaggagcagtacgaggaggcccgc
aggaggttcacctcggcccagcaggccctgggctaccagccagacctgtcctacaacatg
gctctgtgttactacagcatgaagaactacagcgcggctctgaagcacatcgcagagatc
atcgagagagggatccgggagcaccctgagctgagcgtcggcatgacgacggagggcgtg
gaggtgcgcagcgtgggcaacaccctgaccctccagcagacggcgctgatcgaggccttc
aacctcaaggccgccgtccagttccagctcaggaacctggagggggctcaggacgcgctg
acagacatgccccccccggacagacgaggtgaggaggagctggaccccgtgaccctccac
aaccaggccctgctgaacatggagcgccgtccctcggagggcttcgagaagctggccttc
ctcctgcagcaggaccccttccccccggtcaccttcgggaacctgctgctgctctactgc
aagtatgagtactttgacctggctgcagacgtccttgcggagaacgcccacctcacctac
cgcttcctgtccccgtacctgtacgagttcctggacgccatgctgacctgccagaccgcc
cccgaggaggccttcaggaagtttgacgacatgaacggcaaactgacggaacaactccgc
aagctggccaaacaggtgcaggacttcaggctggcccgggacgaccaggggctgaagaag
ggggtgcaggagtacgaccagctgctggagaggtacatcccggtgctgatggcccaggcc
aagatctactggagccgggacaacttccagatggtggagaagatcttccgcaagtcggtg
gagatctgcaacgagcacgacacctggaagctgaacgtggcgcacgtcctcttcatgcag
gagaacaagtacaaggaggccatcgggttctacgagcccatcgtcaagaagcactacgac
aacatcctgaacgtcagtgcggtggttctggccaacctgtgtgtctcctacatcatgacc
agccagaacgaggaggcggaggagctgatgaggaagatagagaaggaggaagagcagatc
tcctacgacgccccggacaagaaggtgttccacctctgcatcgtcaacctggtaatcggc
acgctgtactgcgctaaagggaactacgacttcggcatatctagagtcatcaagagtcta
gagccctacaacaagaagctggggacagacacctggttctacgctaagcgctgcgtcctc
tccctgctggagaacatgtccaaacacatgatcctgctgagggacgccgtggtgcaggac
tgcctgctgttcctggagcgctgcgaagtgtacggccgggaggagccggcggtgatccag
gcccccctgcaggacgagcgctcctcctcctcctcctcctcctccctggggaggaacagc
gtcacctacgaggcgcgcctcctcaaggccctcttctaccaggtcatcggctggaacgag
tga
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