Gadus morhua (Atlantic cod): 115532041
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Entry
115532041 CDS
T10832
Name
(RefSeq) TBC1 domain family member 22B-like isoform X1
KO
K20360
TBC1 domain family member 2
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115532041
Membrane trafficking [BR:
gmh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
115532041
Retrieval pathways
115532041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
CDC45
DDHD
RNA_pol_Rpc4
Mat89Bb
Motif
Other DBs
NCBI-GeneID:
115532041
NCBI-ProteinID:
XP_030197357
Ensembl:
ENSGMOG00000005057
LinkDB
All DBs
Position
19:14851262..14959529
Genome browser
AA seq
583 aa
AA seq
DB search
MSSDGNNKKQFWKRSTSKVPGSIQHVYGAQHPPFDPLLHANLIKAGPKPAPVTPGGKPKK
ATTFQEFESITSDAWEVGDDDDDELLAMAAHNLNIEVVMETANKVIENHSKQQERQRRDD
ETERQEEDEQEEQQQEKEEEEEATAEEEEEEQQEEGGSCRGEGTEEETASTETSLGPHGD
SRLVKSHSEAPIGSPRDEAAERGPLHRQRSLPPRPPLIPMVARIADQNTSGSPVMTEREA
SRLDKFRQLLAGPHTDLEELRKLSWSGIPRQVRPITWKLLSGYLPANADRRECVLQRKRQ
EYFGFIQQYYDSRNDEHHQDTYRQIRIDIPRMNPERLVMQPQVTEIHIDIPRTNPLIPLF
QQASVQEIFERILFIWAIRHPASGYVQGINDLVTPFFVVYVFEYIEEEVENFDVSSLREE
SLRNIEADSFWCMSRLLDGIQDNYTFAQPGIQRKVKALEELVSRIDDSVHLHMQQYEVEY
LQFAFRWMNNLLMRELPLRCTIRLWDTYQAEPEGFSQFHLYVCASFLVLWRKEILEERDF
QGLMILLQNLPTMHWGNEEVSVLLAEAYRLKFAFADAPNHYKR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgacgggaataataaaaagcagttctggaaacggagtacgagcaaggttccc
ggcagcatccagcatgtgtacggtgctcagcacccccccttcgaccccctgctgcacgcc
aatctgatcaaggcggggcccaagccggcccccgtgaccccgggcggtaagcccaagaag
gccaccaccttccaggagttcgagagcatcaccagcgacgcctgggaggtgggcgacgac
gacgacgacgagctgctcgccatggccgcgcacaacctcaacatcgaggtcgtcatggag
accgccaacaaggtgatcgagaaccatagcaagcagcaggagaggcagcggcgggacgac
gagacggaacgccaggaggaggacgagcaggaggagcagcagcaggagaaggaggaggaa
gaggaggccaccgccgaggaggaagaggaggagcagcaggaggagggagggtcgtgtcga
ggggaggggacggaggaagagaccgccagcactgagacgtcgttgggtccccacggcgac
agccggctcgtcaagtcccacagcgaggctcccattggctctcccagagacgaggcggcg
gagcgagggccgctccaccgccagcgctccctgcccccccggccccccctcatccccatg
gtggcgcgcatcgccgaccagaacaccagcggctcccccgtcatgacggagcgggaggcc
tcgcgcctcgacaagttccgccagctcctcgccgggccccacaccgacctggaagaactc
cggaaactcagctggtctggcatcccgcgacaggttcgaccaatcacatggaagctgctc
tcgggttacctccctgccaatgcagacaggagagagtgcgttctccagagaaagagacaa
gaatacttcggcttcatccagcagtactacgactccaggaacgacgagcaccaccaagac
acctacagacagatccgtatagacattcctaggatgaacccagagcgattggttatgcag
ccccaggtgaccgagattcacattgacataccgagaactaatcctcttattcctctcttt
caacaagcttctgtccaagagatcttcgagcgtatcctcttcatctgggccatccgccac
ccggccagcggctacgtccagggcatcaacgacctcgtcacgcccttcttcgtggtctac
gtcttcgagtacatcgaggaggaggtggagaactttgacgtgtccagtctgcgggaggag
tcactgcggaacatcgaagctgacagcttctggtgcatgagcagactgctggacggaata
caggataactacacgttcgcccagcccgggattcagaggaaagtcaaagccctggaagag
ctggtcagccggatcgatgactccgtgcacctccacatgcagcaatacgaagttgagtat
ctgcagtttgcgtttcgttggatgaacaacctgctgatgagagagctgccgctacgatgt
accatcagactgtgggacacctaccaggctgaacctgagggcttctctcagttccatctc
tacgtctgcgcctccttcctggtcctttggaggaaggagatcctggaggagagggacttc
caggggctgatgatcctgctgcagaacctgcccacaatgcactggggcaacgaggaagtg
agcgtgctgctggccgaggcctacaggctgaagttcgccttcgcagacgcacccaaccac
tacaagagatga
DBGET
integrated database retrieval system
