Gadus morhua (Atlantic cod): 115532176
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Entry
115532176 CDS
T10832
Symbol
sec31a
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec31A
KO
K14005
protein transport protein SEC31
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115532176 (sec31a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115532176 (sec31a)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gmh02044
]
115532176 (sec31a)
Membrane trafficking [BR:
gmh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
115532176 (sec31a)
Secretion system [BR:
gmh02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
115532176 (sec31a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_HPS5
Beta-prop_DCAF12
TPR_Sec16
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Prp18
Motif
Other DBs
NCBI-GeneID:
115532176
NCBI-ProteinID:
XP_030197627
LinkDB
All DBs
Position
19:10185735..10203460
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AA seq
1441 aa
AA seq
DB search
MKLKEINRTAIQSWSPSQQHPIYLATGTSAQQLDASFSTNACLEIFELDLADTSLDMKSC
GTFSSSHRFHKLVWSPHGMDGAGHPNGVLIAGGENGDVILYDPAKIMAGDDDVIITQSDK
HTGPVRALDVNPFQANLVASAGNESEIYIWDLNNFGSPMTPGPKTQPLEDISCVAWNRQV
QHILASASPSGRASVWDLRKNDLIIKVSDHSNRMHCSGLAWNPEVATQLVLSSEDDRMPV
IQMWDLRFATSPLKILENHTRGVLAMDWSLADPELLLSCGKDNRILCWNPNTAEVLYELP
TSTQWCFDIKWCPRNPAVLSAAAFDGNIGIYSIMGGSSQAQNQRQADQITNSFGNMDPFG
TGQALPPLQMPQAPCPAPPAMVNPLKKPPKWIRRPVGASFAFGGKLVTLDNAPSNPQQPA
KHVVHVSQVVTETAFLERSDLLQATLSNGNFVDFCQEKIAAAQDGFERTVWSFLKVNFDS
DVRGQYLDLLGYKKEELALKISTALKEMAEKPETVVRAPATLQPTVALEPTEAPEDLQPT
TAPDAFQPVAAPAVSSFMPPPADISPEAVFDLISAANLQPADEPAPALLPEEPAPAPLPE
DEFDLDLDADSPVDLGLGEELDQELEEGEDVDLGDEEDFNLEEEEEEEILLQEDVGLPED
VPAEPADQTPVTLEDSAVVPEIVPDIVPDIAAPPAADDTAAPAAPVAAPAAAAPAPAPAP
TPAAVAQGGVHLAVSQDVDGLITQALLTGDFEGAVDLCILDNRMADSIILAIAGGSELLE
KTQKKYFSKTHTKLTKLISAVVMKDWTDILTSCDLANWKEPLAAVMTYARPDEFSAFCDL
LGGRLEVSQDAVLQAQASLCYICAGNVEKVVSCWTRAQAGYLPLSLQDLVEKVVVLRRAV
EQARRGGAAPTASSVLLEEMMGQYAGLLASQGSLATALAYLSGSTNQQLHKRLTQALGQP
QQQPQQKPQPQQQQQQQPFRPGRTPMRRRRPAPGPLYNPGPPSMGPSQPAPGPAAPQPTS
TPPQPQYYQPVRAASTVTSWSNQTPTALPSIPPVQLASGPDQQNEPLPPPNPTHGMPAPG
PAAAGGPPPSSAPGYMYAQQYQPQVSHYGAPGTGPNYQPFQYPAASLAAPPSPTSLPPAP
GFRSQYMQPGPGPSPVYQPLSCSPPYNAPYFPTAPTSSSASSSPTYAPGPLAHGTPFQHG
GPGSPVSYMQSPFGGPGPQNGWNDPPALNRAGTKKKGLENYTPPAPITAPIMGPPGSDPQ
AQPMSPVSLQGSMDPGQGAFQGPFSGRQQLPPSSGGHPAMPQTSVEGPPGAPTGDHIQPM
QSIPAEKILKKPIPEEHVVLKTTFEGVIQKCLAVASDPQTKRKLDDASKRLEALYDKLRE
QSLSPAIVGGLHNIARSIESRAYTDGLNIHTHIVSSSNFSETSAFMPVLKVVLTQANKLG
V
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaggagatcaatcgtacagccatccagagctggagtccctcacagcaacat
ccgatctacctggcaacagggacctccgcacagcagctggatgcctccttcagcaccaat
gcctgcctggagatctttgagttggacttggccgatacgtctctggacatgaagtcttgt
ggcaccttctcgtcctctcacagatttcacaaactggtgtggagcccccatgggatggac
ggggccggtcacccaaacggggtcctgatcgccggtggggagaacggcgatgtcatcctc
tacgacccggccaaaataatggctggtgacgacgacgtcatcattactcagagcgacaag
cacacagggccagtgagggccctcgatgtcaaccccttccaagcaaacctggtggcgtcc
gcaggcaatgagtctgaaatctacatttgggacctgaataactttggctccccgatgaca
cccggacctaaaactcagcctctggaggacatcagctgcgtggcgtggaaccgtcaggtg
cagcacatcctggcctcggccagtcccagcggccgcgcctccgtctgggacctccgcaag
aacgacctcatcattaaagtcagcgaccacagcaacaggatgcactgttctgggctggcc
tggaacccagaggtggccacgcagctggtcctgtcgtcagaagacgaccgcatgcccgtc
atccaaatgtgggacctccgcttcgccacgtccccgctgaagatcttggagaaccacacc
aggggtgtcctagccatggactggagcttggcggaccctgagctgctcctgagctgtggg
aaggacaacaggattctctgctggaatccaaacactgcagaggttttgtacgagctgccc
accagcactcagtggtgcttcgacatcaagtggtgtcccaggaacccggcagtgctgtca
gccgcagccttcgacggcaacatcggcatctattccatcatgggaggcagcagccaggct
cagaaccagaggcaagcggaccaaatcaccaactccttcgggaacatggacccgtttgga
accggacaggctctgcccccgctgcagatgccccaagccccctgccccgccccccctgcc
atggtcaaccccctgaagaagccccccaagtggatacgcagacccgtcggagcctcgttc
gcctttggcggcaagctcgtgaccctggacaacgcaccatcgaacccgcagcagcccgcc
aagcacgtggtgcacgtgagccaggtcgtcacggagacggccttcctggagcgctccgac
cttctgcaggccacgctgagcaacgggaactttgtggacttctgccaggagaagatcgcc
gccgcgcaggatggcttcgagaggactgtctggtccttcctcaaggttaattttgacagt
gatgtccgtggacaatatcttgatctactggggtacaaaaaggaggagctagctctaaag
atttccactgccctgaaggaaatggctgaaaagccagagacggtggtgagggcccctgcc
actctccagcccacggtggccctcgagccgaccgaggcccctgaagacctccagcctacg
acggcccctgatgccttccagcctgtggcggcccctgctgtcagcagcttcatgcccccc
cctgctgacatctctccagaggcggtgtttgacctcatctcggcagcaaacctccagccg
gccgacgagccggcccccgccctccttcccgaagagccggcccccgccccccttcccgag
gatgagtttgacctggacctggacgctgatagccccgtagacctgggcctgggggaggag
ctggaccaggagctcgaggagggggaggatgtggatttgggggatgaggaggatttcaat
ttggaggaagaggaggaggaggagatactactacaggaggatgtgggtctaccagaagat
gtgcctgctgagccagcagaccagacccctgtgacgttggaggactctgctgtagtccct
gaaatcgtccctgatatagtcccagatattgctgcccctcctgctgctgatgatactgct
gctcctgctgctcctgttgctgctcctgctgctgctgctcctgctcctgctcctgctcct
actcctgctgctgtggcccagggaggcgtccacctcgctgttagccaagacgtggacggg
ctgatcacccaggcactgctgactggagactttgagggggctgtggacctctgtatcctc
gacaaccgcatggccgacagtatcatcctggccatcgctggcggctcggagctcctggag
aaaacacagaagaagtatttctccaaaacgcacaccaaacttaccaagttgatcagtgcg
gtggtgatgaaggactggacggacatcctgacgtcatgtgacctggccaactggaaggag
cctctggctgccgtcatgacctacgcccggccagacgagttctccgccttctgtgacctt
ctgggtggacgcctggaggtgtcccaggacgccgtgctccaggcgcaggcgtccctgtgc
tacatctgtgctggtaacgtggagaaggtggtgtcgtgttggacccgggctcaggcaggg
tacctccccctctccctccaggacctggtggagaaggtggtggtgctgcggcgggccgtg
gagcaggcccggcggggcggcgccgcccccaccgccagcagcgtcctgctggaggagatg
atgggccagtacgccggcctgctggcctcccagggcagcctggccaccgccctggcctac
ctgtcggggagcaccaaccagcagctccacaagcgtctaactcaggcattgggccaacca
caacaacaaccacaacaaaaaccacaaccacaacaacaacaacagcaacagccattccgg
cccggcagaacccctatgcggcggcggcggccggccccaggccccttgtacaacccgggc
ccgccctccatggggccctcccagccggccccggggcccgcggcgccccagcctacctcc
actccacctcaaccacagtattatcaaccggtgagggctgcctccactgttacatcgtgg
agtaaccaaacccccacagccctccccagtatcccccccgttcagctagccagtggtccc
gaccagcagaacgaacctctgcctcctcccaaccccacgcacgggatgcccgccccgggc
ccagcggctgccggcggccccccgccctcctccgctccagggtacatgtacgcccaacag
taccagccccaggtcagccactatggagcgccagggaccgggcccaactatcagccgttc
cagtaccctgcagcttctctagctgcccccccctcccccacctccttacctccggcccct
ggcttccgctctcagtatatgcagccgggccccgggccctctcccgtataccagcctctg
tcgtgctctcctccgtacaacgcaccctactttccgactgcgcctacctcttcctccgcc
tcttcgtctcctacctatgcacccggtcctctggcccacggaacgccgttccaacatggc
gggcctggatcgcctgtctcatacatgcaatcaccgtttggaggaccaggacctcagaac
ggctggaacgaccctcctgctcttaacagagcaggaacaaagaagaagggccttgagaac
tacactccacctgcccccatcaccgcccccatcatgggcccccccggcagcgacccccag
gcccagcccatgtcccccgtatctctgcagggatccatggacccgggccaaggggccttc
cagggccccttctcaggcaggcagcagctccctccctcttctggtggtcaccctgccatg
cctcaaaccagcgtggaaggtccgcctggagctccgacgggggaccacatacagcctatg
cagtccatccccgcggagaagatcttgaagaagcccatcccagaggagcatgtggtgctc
aagaccaccttcgagggagtgatccagaagtgcttggctgttgctagtgaccctcaaacc
aagaggaaacttgatgacgccagcaagcgcttggaagccctgtatgacaaactcagagag
cagtcgctctccccagccattgtaggaggtctgcacaacatagcaaggagcatagagtcg
agggcctacacggacggcctcaacatccacacccacatagttagcagcagcaacttcagc
gagacgtctgccttcatgccggtcctcaaggtggtgctgacacaagccaacaaactcgga
gtctaa
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