Gadus morhua (Atlantic cod): 115532191
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Entry
115532191 CDS
T10832
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04010
MAPK signaling pathway
gmh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115532191
04020 Calcium signaling pathway
115532191
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115532191
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115532191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
115532191
NCBI-ProteinID:
XP_030197652
Ensembl:
ENSGMOG00000004596
LinkDB
All DBs
Position
19:complement(6995050..7114957)
Genome browser
AA seq
2296 aa
AA seq
DB search
MILSTIIANCIVLALEQHLPVNDKTPMSERLDHTEPYFIGIFCFEAGIKIIALGFAFHKG
SYLRNGWNVMDFVVVLTGILTTVGADRGLDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIM
KAMVPLLQIGLLLFFAIVMFAIIGVEFYMGKFHTTCFTIDTGDKVTDWPCGKEPPARTCP
NGTECKEYWTGPNFGITNFDNILFAVLTVFQCITMEGWVDILYNTNDVAGNTWNWLYFVP
LIIIGSFFMLNLVLGVLSGEFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEV
LLEEEDENAEEKSPLDGAWYKMNQNLPVMKRGKVKKGKNDLMNAEDGDDPYADISSVAPP
GSPFGRASVRSSSRLDGSAYLRRKEKRMRFFIRRMVKAPSFYWLVLCLVGLNTLCVAIVH
YNQPDWLTRALYAAEFMFLGLFLTEMSLKMYGLGARNYFHSSFNCFDFGVIVGSILEVIW
DMIKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVF
ALLGMQIFGGQFNFEEETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVRRGM
FSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEQEQAANKKLALQKAMEVKE
VSPMSAANISIAAFVKQNRDVISRRSSIVSVQSPKEQHRSARSMSVWEQRTNQLRRHNVR
ASNEALFNELDPEERLRLTAALHLNRPDGHSHLDRPLVVEGNNGGGNGVGGGGGGGGGGG
DPNQSRQPSPRTPDGNGKKEATTATEEEARSRKHQHRHRERNGDGGGREGRGERRHHRHH
RQGGSAEEVFTPSDLPGLGGGGGEREPPHHHHHHHHAHRTAREGNGALANGGRGRGPREG
GGGGESNGERKGRCSRMLRAQSTMDVDEWRQNGAKTHRERHADPGLDSSASSPSQLLGSE
LSLDEKQEDADNLKNSSRASQAGLNSNAVHIPVTVTAPGPGETTIIPMNNIECEGFSFSS
EKKDLEEQEANGPKGILPYSSMFIFGQTNPIRRLCHYVVNLRYFEMCILLVITMSSIALA
AEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVS
GALVAFACSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIV
YMLFMFIFAVIAVQLFKGKFFYCTDESKGLQKDCRGQFLDYERDEVTAKTREWKKYDFHY
DNVLWAFLTLFTVSTGEGWPMVLKHSVDATYEDKGPSPGFRMETSIFYVVYFVVFPFFFV
NIFVALIIITFQEQGDKAMAECSLEKNERACIDFAINARPLTRHMPENKESFQYRMWKFV
VSPPFEYAIMTMIALNTIVLMMKFYGAPAPYEAMLKYLNIIFTALFTLECILKIIAFGPL
NYLKAAWNVFDFVTVLGSITDILVTECNTDKLINLSFLRLFRAARLIKLLRQGYTIRILL
WTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIELNEATAIHYNNNFQTFLQALILLF
RSATGEAWHEIMLACLSNKPCDKLSATVGHECGSDFAYFYFVSFIFLCSFLMLNLFVAVI
MDNFEYLTRDASILGPHHLDEFIRVWGEYDPAACGRMPYRDMFEMLRDMSPPLGLGKKCP
ARVAYKRLVRMNMPIAEDNTVHFTSTLMGLIRTALEIKLASGVLAQRLCDADLKREINRV
WPSLSQKTADLLVTPHKHNELTVGKVYAALMIFDYYKLNRAKKLAQHLNLGPPGKMGNLF
RPMLPLTHMAVKAPTPSAKPLPPKTQPPPDPHPEVPPPTTATPTTVTTASTPTTVTTANS
ATSANTVTGSLANREALLSQRSAIKHSQSGDVSQTAHRPGRRILRRGQSEDVSYSAEPQE
LVEMRRVEVLSDENEEDDDDDGFPQEGHTRAASMPRLNAEHYRNHPRHAPGKHLAPIVDL
SPIRRSASSLNPQRPLEVNLGEYALDATLQSQDRAPQHHHHHRCHRRRDKDRKQKSLDMG
ATERGSSAIGEAWSRERARERERAGPQEGRQQRYYSCDRYGGGAASREHSHARSAGPSRC
TSPGEGPDAGIYKLGAIMNKGGPVVVTTLTAARGRRQLPQTPLTPRPGVSYKTTTPTSTS
VSTFTSTTTTTTTTTGGHQHHQSRAGGQDDAPRLPVTSMGSDPHCSHPLPAPSWDSPAQR
GLVEDPEDYQDAVSNHGGRGGGGEGRPARTNTTSSTTASHSGTGVPNGFHFTLGVNAATG
SGPRGGLRDTTEEDWC
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atgatcctctccaccatcatcgccaactgcatcgtcctcgccctggagcaacacctgccc
gtcaacgacaagacgcccatgtccgaacggctggaccacacagagccctactttatagga
atattctgcttcgaggcgggcatcaagatcatcgccctgggcttcgctttccacaaaggc
tcgtacctgaggaacggctggaacgtcatggactttgtggtcgtcctcaccggcatcctg
acgacggtgggtgcagaccgtggtctcgacctgaggaccctgcgggcagtccgagtcctg
agacccctcaagttggtgtcaggaataccaagtctccaggtggttctgaagtccatcatg
aaggccatggttcctctgctccagatcggcctgctgctcttcttcgccatcgtcatgttc
gccatcatcggggtggagttctacatggggaagttccacacaacctgcttcaccatcgac
accggtgacaaggtcactgattggccgtgtggcaaggagcccccggcccggacgtgtccc
aacggtacagagtgtaaggagtactggacgggccccaacttcggcatcaccaactttgac
aacatcctgttcgcggtgctcaccgtgttccagtgcatcaccatggagggctgggtggac
atcctctacaacaccaacgacgtggcgggaaacacttggaactggctgtactttgtcccc
ctcatcatcatcggctccttcttcatgctcaacctggtgctgggtgtcctatcaggggag
tttgccaaggagagggagcgagtggagaagagacaggagttcctgaagcttaggagacaa
cagcagatagagagagagctgactgggtacctggagtggatctgtaaagcagaggaggtg
ctcctggaggaggaggatgagaatgcggaggagaagtcccccctggatggagcgtggtat
aaaatgaaccagaacctaccagtcatgaaacggggaaaggtcaaaaagggtaagaacgac
ctcatgaatgcagaggacggagacgacccctacgcagatatttcatctgttgcgcccccc
ggctccccgttcggccgggccagtgtgaggagcagctcccggctggacggctccgcctac
ctgcggcgcaaggagaagcggatgcgcttcttcatccggcgcatggtgaaggccccgagc
ttctactggctggtgctctgcctggtgggcctcaacacgctgtgtgtggccatcgtgcac
tacaaccagcccgactggctcaccagggccctctacgcggctgagttcatgttcctgggt
ctgttcctgacggagatgtccctgaagatgtatggcctaggggcccgcaactacttccac
tcctccttcaactgcttcgacttcggggtgatcgttggcagcatcctggaggtgatctgg
gatatgatcaaaccaggagcctccttcggcatcagcgtcctccgagccctgaggctgctg
cgcatattcaaagtcaccaagtactggaactcgctgaggaacctggtggtgtccctgctc
aactccatgaagtccatcatcagcctgctcttcctcctcttcctcttcatcgtggtcttt
gccctgctgggcatgcagatctttggaggacagtttaactttgaagaggagacgcccacc
actaactttgacaccttcccagccgctatcctgacagtcttccagatcctcaccggcgag
gactggaatgcagtgatgtatcatgggattgagtcccaggggggcgtgcggcgcggaatg
ttctcctccgtctacttcatcgtgctcacactcttcggaaactacaccctgctgaatgtc
ttcttggccatcgcggtggataacctggccaacgcgcaggagctaaccaaggacgaggag
gagcaggagcaagcagccaataagaagcttgctctgcagaaggccatggaggtgaaggaa
gtcagtcccatgtctgccgccaacatctccatcgccgcttttgtaaagcaaaatcgagac
gtgatctctcgcaggtcctccatcgtcagcgtacaatcacctaaggagcagcaccgctcg
gcgcgctccatgtccgtgtgggagcagcggaccaatcagctgcggcggcacaacgtgcgc
gccagcaacgaggcgctcttcaacgagctggaccccgaggagcggctccgcctcaccgcc
gcgctgcacctcaaccgccctgacggccactcgcacctggaccggccgctcgtcgtcgag
ggcaacaacggcggcggtaatggcgttggtggaggtggcggtggcggcggcggaggcggc
gaccccaaccaaagcagacagccgtcgccaaggacgcccgacggaaacggcaagaaggag
gcgacgacggcgacggaggaggaggcacgctccaggaaacaccaacaccgccaccgcgag
cggaacggggacggcggcgggagggaggggcggggggagcggaggcaccaccgccaccac
cgccagggggggtcggcggaggaggtgttcacccccagcgacctgcccggactgggcgga
ggaggaggggagcgggagccgccccaccaccaccaccaccaccaccacgcccaccgcaca
gcccgggagggcaacggggctctggccaacggggggcgggggagggggcccagggaggga
ggaggagggggggagagtaacggggagaggaaggggcgctgctctcgtatgctccgagct
cagtccacgatggacgtagacgagtggaggcagaacggagccaagacacaccgggagcgt
cacgcggacccgggcctggacagctcggcctccagccccagccagctgctgggcagcgag
ctgagtttggacgagaagcaggaggacgccgacaacctgaagaactccagccgggccagc
caggccggcctcaacagcaacgccgtgcacatccccgtcaccgtcacggccccggggccc
ggagagaccaccatcatacccatgaacaacatagagtgtgaaggtttctcgttctcatcg
gaaaagaaggatctggaggagcaggaggccaacgggcccaagggcatcctgccctacagc
tccatgtttatctttggacagaccaacccgatccgacgtctctgccactatgtggtgaac
ctgcggtactttgagatgtgcatcttgttggtcatcacgatgagtagcatcgccctggct
gctgaggaccctgttcaggctaacgcgccgcgcaacaatgttctcaaatacctggattat
gtttttactggagtctttacgtttgagatggtgattaagatgatcgacctgggacttctc
ctccacccgggagcctacttcagagacctctggaacatcctggacttcatcgtggtcagc
ggagcgctggtggcattcgcctgctcggggaccaagggtaaggacatcaacaccatcaag
tccctgagggtcctccgagtgctgcgtcccctcaaaaccatcaagaggctgcctaagctc
aaggcggtgtttgactgcgtggtgaactctctgaagaacgtgctgaacatcctcatcgtc
tacatgctcttcatgttcatcttcgccgtcatcgccgtgcagctgttcaagggcaagttc
ttctactgcaccgacgagtccaagggcctgcagaaggactgcaggggtcagttcctggac
tacgaacgggatgaggtgacggccaagacccgggagtggaagaagtatgacttccactac
gacaacgtgctgtgggccttcctcaccctcttcaccgtgtccaccggtgagggctggccc
atggtcctaaagcactcggtggacgccacctatgaggacaaggggcccagtccgggcttc
cgcatggagacctctatcttctacgtggtctacttcgtggtgttccccttcttcttcgtg
aacatcttcgtggccctcatcatcatcaccttccaggagcagggggacaaggccatggcg
gagtgcagcctggagaagaacgagagggcgtgtatagactttgccatcaacgccaggccc
ctgaccaggcacatgccagagaacaaggagtcgttccagtaccggatgtggaagtttgtg
gtgtcccctccgtttgagtacgccatcatgaccatgatcgcactcaacaccatcgtcctc
atgatgaagttctacggcgccccagccccctacgaggccatgctgaagtacctcaacatc
atcttcacagccctcttcaccctggagtgtatcctgaagatcatcgccttcggacccctg
aactacctgaaggcggcgtggaacgtgtttgactttgtgacggtactgggcagcatcacg
gacatcttggtgacggagtgtaatacggacaagctgatcaacctcagctttctgagactg
ttccgggcggcgcggctcatcaagctcctcaggcagggctacaccatccggatcctgctg
tggaccttcgtacagtccttcaaggcactgccctatgtctgcctcctcatcgccatgctg
ttcttcatctacgccatcatcggcatgcaggtgtttgggaacatagagctgaacgaggcc
accgccatccactacaacaacaacttccagaccttcctccaggccttgatcctgctgttc
aggagtgcgacgggggaggcctggcacgagatcatgctggcgtgtctcagtaacaagccg
tgcgataaactctctgccaccgttggacacgagtgtggaagcgactttgcttacttctac
ttcgtctccttcatcttcctctgctccttcctgatgctgaacctgtttgtggcggtcatc
atggataactttgagtacctcaccagggacgcctccatcctgggcccccaccacctggac
gagttcatccgcgtgtggggcgagtacgaccctgcagcctgtggtcgcatgccctaccgt
gacatgttcgagatgcttcgagacatgtcccccccgctgggcctgggcaagaaatgtccg
gcccgcgtcgcatacaagcgtctggtgaggatgaacatgcccatcgccgaggacaacacc
gtgcacttcacctccacactcatggggctgatccgcaccgctctggagatcaagctggcg
tctggggtcctggcccagcgcctgtgcgacgctgatctgaagcgagagatcaaccgcgtg
tggcccagcctttcccagaagaccgctgacctactggtcactccacacaagcataatgag
ctgacagtaggaaaggtctacgctgcactgatgatctttgactattataaactgaatcga
gccaagaaacttgcgcagcatctaaatcttggacctccgggtaaaatggggaacctgttc
cgacccatgctgcccctgacccacatggcagtcaaagcaccaacccctagtgccaaacca
ctcccgcccaagacccagccccccccggacccccaccctgaagtcccgccccctactact
gccacacccactaccgtcaccaccgccagcacccccactaccgtcaccaccgccaacagc
gccaccagcgccaacaccgtcaccggctccctggccaatagggaggcattactaagccag
agaagtgccataaagcattcacagtccggggacgtatcgcagaccgcacaccggcctggc
agacgcatcttaaggaggggacagtcagaagacgtgtcatactctgccgaacctcaggaa
ttggtggaaatgaggagagtggaggtcctgtcagatgaaaatgaggaagatgacgatgac
gatggatttccccaggagggccacaccagagctgcctccatgccaaggctcaatgctgag
cactaccggaaccaccctcgccacgcccccgggaagcacctggcacccatcgtggatctc
agtcccatcaggcgttcggcgtcctccctgaacccccagcgccccctggaggtcaacctg
ggggagtacgccctggacgccaccctccagtcccaggacagggctccccagcaccaccac
caccaccgctgccaccgccgccgcgacaaagaccggaagcagaagtccctggacatgggc
gccacggagcggggttcatctgctataggcgaggcgtggtcccgggagcgagccagggag
cgggagcgggccgggcctcaggaggggagacagcagcgctactactcctgtgaccgctac
ggaggaggagcggcctccagggagcacagccacgccaggtcggccggccccagccgctgc
acgtcacctggggagggccccgacgctgggatctacaagctgggcgccatcatgaacaaa
ggcggtcccgtcgttgtgacaacgctgaccgccgcccgtgggcggcgacagctgccgcag
acccccctcaccccacgccctggggtctcctacaagaccaccacccccacctccacctcc
gtttccaccttcacttccaccaccaccaccaccaccaccaccaccggaggccaccagcac
caccagtcccgggccgggggccaggacgacgctccccggctgccggtgaccagcatgggg
tcggacccccactgcagccacccgctgccggcgccctcctgggactctccggcccagcgc
ggcctcgtggaggacccagaggactaccaggacgctgtcagcaaccacggaggacgagga
gggggcggagagggacgacccgccaggaccaacaccacctcttccaccaccgcatcacat
tcagggacgggagtcccgaacggcttccacttcaccctgggggtcaacgcggcgacgggc
tctggtcccagagggggtctcagagacaccacggaggaggactggtgctag
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integrated database retrieval system
