Gadus morhua (Atlantic cod): 115532208
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Entry
115532208 CDS
T10832
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03272
Virion - Hepatitis viruses
gmh04145
Phagosome
gmh04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
115532208 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115532208 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
115532208 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115532208 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmh04147
]
115532208 (scarb1)
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Phagocytosis
Scavenger receptors
115532208 (scarb1)
Exosome [BR:
gmh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115532208 (scarb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
CyanoTRADDas_TM
CxC5
PorA
Motif
Other DBs
NCBI-GeneID:
115532208
NCBI-ProteinID:
XP_030197684
Ensembl:
ENSGMOG00000017845
LinkDB
All DBs
Position
19:10968209..10982871
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AA seq
498 aa
AA seq
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MHIDKSKVAIIFMVLGSLTVLFGIIVVFAGPLIIDDQIIKNTVIDPNNEIAYPMWKDIPV
PFYMSVYFFNVLNPKEVLLGEKPMVEERGPYVYRKRCQKDNITFHPNFTVSYREYRQYYF
EPSMSVGNESDVVTIPNMLVLGAAVMMEKLPFAVRMMMSATFKTFKEGPFLTKPVGELMW
GYDSGLVDFLNKYLPGMLPTKGKFGLFSEFNNSNTGLFNIHTGKDDISKVHKVDSWNGLK
KLTNWGTPQCNMMNGTAGQMWPPFMTPKTTLPFYSPDACRSMELVYQRPGVMQGIPLYRY
VAPKTLFANGSDYAPNEGFCPCRQSGILNVSSCRHNSPVFISHPHFYNADPVLRDFVGGL
SPNEDEHGLFIDIHPMTGVPLNVSIRLQLNLFMKRVSAITETGKIADVVMPMIWFEESGY
IDGPILDTFHTNLVVLPAVMEYTQYIFISLGLLTIIVALLVHRRSKNLKDSTGASNGDGL
VSGPPSEKTPLLHDGTMD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcatattgataaatccaaggtggcgatcattttcatggtccttgggagtctgaccgtc
ttatttggaatcattgttgtgtttgcaggaccattgattatcgatgaccaaataataaag
aacaccgtgatagacccgaacaatgagatcgcatacccaatgtggaaggacatccctgtc
cccttctacatgtcagtgtacttcttcaacgtcctcaacccgaaggaggttctgctgggg
gagaaacccatggtggaggagaggggaccttacgtgtacaggaagcgctgtcagaaagac
aacatcacctttcacccaaacttcaccgtgtcctaccgggagtaccggcagtactacttt
gagcccagcatgtcggttgggaatgagtcggacgtggtcaccatccccaacatgttggtg
ctgggcgcggcggtaatgatggagaagttgccgtttgctgttcgtatgatgatgagcgcc
acattcaagaccttcaaggaaggccccttcctgaccaagcccgtgggagagctgatgtgg
ggctacgacagcggcctggtcgacttcctcaacaaatacctgcccgggatgctgcccacc
aaggggaagtttggcctgttctccgagttcaacaactcaaacactgggctcttcaacatc
cacaccggcaaagatgacatcagtaaagttcataaagtggactcttggaatggcctcaag
aagctgaccaactgggggaccccccagtgtaacatgatgaatggaacagcaggccagatg
tggcccccattcatgaccccaaagaccacgttacccttctacagtcctgatgcctgcagg
tccatggagctggtgtatcagaggccgggggtcatgcagggcattcctctctatcgctac
gtcgctcccaagactctgtttgccaacggctcggactacgctcccaacgagggcttctgt
ccctgcaggcagtccggcatcctcaacgtcagcagttgtcgccacaactccccagtgttc
atctcccacccccacttctacaacgccgaccctgtcctgcgcgacttcgtcgggggactc
agccccaatgaggacgaacacggcctcttcatagacattcaccccatgacgggtgttcca
ctgaacgtgtccatacgtctccaactaaatctgttcatgaagcgcgtttcggcaattacg
gaaactgggaagatagcggatgtggtgatgcccatgatctggtttgaggagagtggctac
attgacgggcccatcctggacaccttccacaccaacctggtggtgttgccggcggtgatg
gagtacacgcagtacatattcatcagcctgggcctgctcaccatcatcgtggccctgctt
gtgcacaggcgctccaagaatctaaaagatagcacgggtgctagcaacggagacggactc
gtgagcggaccacccagcgagaagacccctctgcttcacgatggaaccatggactaa
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