Gadus morhua (Atlantic cod): 115532287
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Entry
115532287 CDS
T10832
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04020
Calcium signaling pathway
gmh04080
Neuroactive ligand-receptor interaction
gmh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115532287
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115532287
04082 Neuroactive ligand signaling
115532287
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115532287
Ion channels [BR:
gmh04040
]
Ligand-gated channels
Glutamate (ionotropic)
115532287
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
115532287
NCBI-ProteinID:
XP_030197817
Ensembl:
ENSGMOG00000016933
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All DBs
Position
19:complement(7238916..7276572)
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AA seq
905 aa
AA seq
DB search
MRVFLLAVLLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKEAVTSANQIYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARLLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIAD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQNRRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPRGFQMSTRLKIVT
IHQEPFVYVKPTSLDGTCKEEMTLNGVLIKKVICTGPNETIPGNTTGRPIVPQCCYGFCV
DLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQQYPPTDITGQLNLSDPS
VSTVV
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgtttctgctggcggtgctcctctcgtgctcctgcgcgcgggccggctgcgag
ccgaagatagtgaacatcggggccgtcctgagccagaagaggtacgagcaggtcttcaaa
gaagccgtgacctcggccaaccagatatacggccgggacaaattcaagctcaccgccatc
tccgtaacgcataaacccaacgccatccagatggccctctccgtctgcgaagatctcatc
tccagccaggtgtatgccatcctggtgagccacccgccccagtccaacgaccacctgacg
cccacccccgtctcctacaccgccggcttctaccgcatccccgtggttggcctcaccaca
cgcatgtccatctactctgacaagagcatccatctgtccttcctccggacggtgcccccg
tactcccaccaggcccacgtgtggttcgacatgatgcgggagtttcgctggaaccacatc
atcctcatcgtcagcgacgaccacgaggggagggccgcccagaagagactggagactctt
ctggaggagagggagaccaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacccaaggcagagaaagtcctccagttcagccaggagactaac
ttaacggccctgctgttggaggccaaggagctggaggcccgcgtcatcatcctctccgcc
agtgaggaggacgcggcggcggtctacaaagccgcgcgtctcctcaacatgacgggctct
ggctacgtttggctggtgggcgaacgcgagatgtcgggtaaagccctgagcgaggcgcca
gacggtctcatcggcctccagcttatcaacgggaagaacgagtcggcgcacatcgccgac
gcggtggcggtggtggctcagtccatccaggagctgtttgagaaggagaacatcacagag
ccccctagaggctgcgttgggaacaccaacatctggaagacggggccgctgtttaaacga
gtactgatgtcttccaagtacccagaaggcctcacaggaagagtggagttcaacgatgac
ggcgacaggaaatacgctcactacagcatcctgaactaccagaatcgccgtctcattcaa
gtcggcatctacaatggaacgcaggtggtgatgaacaaccagagaaagatcatctggcct
ggaggagagacagagaaacccagaggcttccagatgtccactcgtctaaagatcgtgacc
atccatcaggagccctttgtgtacgtgaagcccaccagtctggacggcacgtgtaaggag
gagatgacattaaacggggtgttaattaaaaaggtgatctgcactgggcccaatgaaacc
atcccaggtaacacaacaggacgcccaatcgtaccgcaatgttgttacgggttctgtgtc
gacctgctgatcaagctggcgatgaccatgaacttcacctacgaagttcacctggtggct
gatgggaaatttggaacgcaagagcgggtgaataacagcaacaagaaggagtggaacggc
atgatgggggagctgctgggcgggctggcagacatgatcgtggccccgctcaccatcaac
aacgaaagggcccagtacatagagttctcaaagcccttcaaataccagggcctcaccatc
cttgttaaaaaggaaataccgcgcagtacgctggactcgttcatgcagccgttccagagc
acactgtggctactggtgggtctgtcggtgcatgtggtggcggtgatgctttacctacta
gaccggttcagcccgtttggaaggtttaaagtgaatagtgaagaggaagaagaagacgcc
ctcaccttatcgtctgccatgtggttctcctggggagtgttgctgaattctggaatagga
gaaggagcaccgaggagcttctcagcgagaatccttggtatggtgtgggccggatttgcc
atgataatagtggcttcctatactgccaacctggctgccttcctggtgctggaccggcct
gaggagcgcatcaccggcatcaatgacccgagactgaggaacccctcggataagttcatc
tacgccacggtgaagcagagctctgtggacatctatttccggcggcaggtggagcttagt
accatgtaccgccacatggagaagcacaactatgagagtgccgccgaggccatccaggcc
gtgcgtgacaacaagctgcatgctttcatctgggactcagcggtgctggagttcgaggcc
tcgcagaagtgcgacctggtgacgacgggggagctgttcttccgttcgggctttggcata
ggcatgcgaaaggacagcccctggaaacagaatgtgtccctggccattctcagttctcat
gagaacggcttcatggaggaccttgataaaacctgggtgaggtaccaggagtgtgactca
aggagcaatgcaccagccacactgacctttgaaaacatggcaggggtcttcatgctggtg
gctggcgggattgctgcagggatcttcctaatcttcattgaaattgcctacaagcgtcat
aaagatgcccgcaggaagcagatgcagctcgcctttgcggcagtcaatgtatggaggaag
aacctgcagcagtatcccccgaccgacatcactgggcagctcaacctgtcggacccttcg
gtcagcacagtggtgtag
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