Gadus morhua (Atlantic cod): 115532427
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Entry
115532427 CDS
T10832
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmh03016
]
115532427 (pus7l)
Enzymes [BR:
gmh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
115532427 (pus7l)
Transfer RNA biogenesis [BR:
gmh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
115532427 (pus7l)
Prokaryotic type
115532427 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
115532427
NCBI-ProteinID:
XP_030198063
Ensembl:
ENSGMOG00000019423
UniProt:
A0A8C5AZF6
LinkDB
All DBs
Position
19:complement(20322728..20329757)
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AA seq
689 aa
AA seq
DB search
MDSGNRMKQVCVTDVPNCFISDHEGFTGTIKNYTKDFVVTEIDIHQQLVNTLVVGPQGID
QPSPDAFPAKSKINKKCKQDSTIFPPDIDPSSLVDLDLRTLLGLSVYEELERFLITTQND
SDTKKDELNPQTQSPSPDMSLGSFPEKHQRMAVHRALRHHFPSLMTVTHQFEIKVRDNPD
YRELSGLVTEEESEEFFRFIDAKVSGSTYTFRPDEVKDRRTAVHHFLSRRFGKLVETKSF
NDPGGTVISVRLRPRKRTKDDSVEEEVYTAFTLRKENLETLEAISYMAATLGASASDFSY
AGIKDKRAVTYQAMVVKNVPVRRLTEKVAELERRGLRVTQVRPASAPLHLGRLAGNHFDL
VVRHLRLHADGDRQGGGQRGVADAVERAVENIKARGFVNYYGPQRFGISQSVQSDRVGLA
LLKEDMVGAVRLFFTPENGDEPHNQAKRHFIQTENAKESLVLMPASKARERLMLRALHRY
GPGADGCTRAWLSLPHGMRVFYPHAYCSRVWNDAVAHRLATLGHAPIQGDLVWQQQDPQG
DMGESNPPQIHVVSAEEERDGVYTLAQVVLPMPGNTVTYPQNAMGAWYQERLAGDGLGDA
RFRITGLKLNLPGCYRPLVVTPRNITHRLQERREEEKEEEERGGEGRGGEEMARRRESEK
APLTLVLNFDLVSSSYATVCLREMMKCDV
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggactctggaaacagaatgaaacaagtgtgtgttactgacgttcccaactgcttcata
tccgaccatgaaggctttactgggacgatcaaaaactatactaaggactttgtggtgacg
gagatagatatccatcagcagttagtcaacacattagtcgtaggtcctcagggtatcgat
cagcccagtcccgatgcctttcctgcgaagagcaaaataaacaaaaaatgcaagcaggac
agcacgatcttcccaccagacatcgacccttccagcttagtggatctggacctgagaaca
ctgttgggtctctcagtgtacgaggaactggaacggtttctaataacgacgcaaaacgac
tctgacaccaagaaggatgaactgaaccctcagacccagtccccgtccccagacatgtct
cttgggtctttccctgagaaacaccagagaatggctgtccaccgtgccctccgacatcac
ttcccctccttgatgaccgtcacccatcagtttgaaattaaggtgagggacaaccccgac
taccgggagctctccgggttggtcacggaggaggagtcggaggagtttttccggttcatc
gatgccaaagtgtccggctcgacgtacacctttaggcccgacgaagtcaaagaccgccgc
accgccgtccatcatttcctcagtcgcaggttcggcaaactggtggagaccaagagcttc
aacgacccggggggcactgttatctcagtgcggctgaggcctcgcaaaaggaccaaagat
gacagtgtggaagaggaggtgtacaccgccttcacactgcgtaaggagaacctggagact
ctggaggccatcagctacatggcggccacgctgggcgcctcggcctcggacttcagctac
gctggcatcaaggacaagcgggctgtcacctaccaggccatggtggtgaagaacgtgccc
gtcagaaggctgaccgagaaggtggcggagctggagcggcgagggctccgcgtgacccag
gtgcggcccgcctccgcgcccctccacctggggcggctggcaggaaaccacttcgacctg
gtggtccgccacctgaggctgcacgccgacggcgaccggcaggggggcggtcagaggggc
gtggccgacgcggtggagcgggccgtggagaacatcaaggccagagggttcgtcaactac
tacggaccgcagaggttcggcatcagccagagtgttcagtccgaccgcgtgggactggcc
ctactgaaggaggacatggtgggggccgttcgcctgttcttcactccggaaaacggagac
gagccccacaaccaggccaagagacacttcatccagaccgagaacgccaaggagtccctg
gttctgatgcccgcctccaaggcccgggagaggctgatgcttagggccctgcaccggtac
ggccctggtgccgacggctgcacccgggcctggctcagcctgccccacggcatgagggtc
ttctacccccatgcctactgcagcagggtgtggaacgatgctgtggcccaccgattggct
actctaggccacgcccccattcagggagatctggtttggcagcagcaggacccgcagggc
gacatgggcgaatccaaccctccacagattcatgtggtgagcgctgaggaagagagagat
ggagtctacacactagcccaggtggtgcttccaatgccggggaacaccgtcacctacccg
cagaacgccatgggggcgtggtaccaggagagactggccggcgacggcctgggggacgct
cgcttccgcatcaccggcctcaaactcaacctgccgggctgctaccgccctctggtggtc
actccgcgcaacatcacccatcggctgcaggagcgacgggaggaggagaaagaggaggag
gagagaggaggtgaggggagaggaggtgaggagatggcgaggaggagggagagtgagaaa
gcacccctcaccctcgtcctgaactttgacctggtgagctccagctatgccacggtgtgc
ctccgagaaatgatgaagtgtgacgtttaa
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