Gadus morhua (Atlantic cod): 115532443
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Entry
115532443 CDS
T10832
Symbol
cntn1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04514
Cell adhesion molecules
Brite
Cell adhesion molecules [BR:
gmh04515
]
Immunoglobulin superfamily
Contactins
115532443 (cntn1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gmh00537
]
Others
115532443 (cntn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115532443
NCBI-ProteinID:
XP_030198083
Ensembl:
ENSGMOG00000018823
LinkDB
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Position
19:20097590..20117115
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AA seq
1044 aa
AA seq
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MASTGLQILLLLTSSLSLSVAVLFGEPRIYGEDATGYGPIFEEEPLDVVYMEDSPDARIS
MNCRARSNPPAMYRWRRDNWEIKLMEQPDEHYSLVGGNLVITNPRQKKHAGNYICVAKNI
YGTVISKEAKVKFGFMDEFPQEDREPVIAKEGQGAVLLCVPPKSWPAEVTYRWIFNEFPV
FLQTDRRRFVSQRTGNLYISRVEAQDAGNYSCFVSSPVIGKSVFSKFIPLIPTPSDEGEE
RRYPADIAVMFPDTTAMLASNITLECFALGNPVPEIVWRKYDSTDLPANHEISASGARLH
LYNIQYEDAGAYDCEAINTKGKDVHKAWVYVESAPEWAETINNTQVDLGSEHTMRCVASG
KPFPFIRWYKDGYMFGKGELKFSSITFDDSGMYQCLAENYYGIKYANAELRVIACAPTFE
LNPVKKQLLGARNGRVVIECRPRAAPRPRFTWTKGKELLYNNSRISLMYDGSLEILNATK
NDEGVYTCLAENDRGKANSSGTLTITEATELTVLPEDTMAKVGEEVILDCGATYDPMLDI
AFVWAVDYRLIDFEAEWQHYERVVDEDEGNGYLRILNVQVWHEGRYTCTAQTVVDNATAY
ADLKIVGVPGPPGVLRVEEIRDSSIKLAWSKGGDHNSPILYYTIQTRHFWALNEDDWRVA
TTSPAFLDGNAEMADVTDLFPWMEYQFRVIATNQYGAGEASIPSIKIKTWDASPVVSPTD
VAGYGGRDGEIFITWKPVEPWYFSGKKFGYIVAFKPHDAYDWWYETISDPETRRYVHRDP
YFVPTEEDFQVREFQVKIKSFNVKGDGPYSPTTVVYYPREVPSEQPTDVYARPVSSHEAS
VWWLPVVDTGTGLQQYIEGYQVKYWRKYDDTEPGANRIFVPATENQTRLENMLPDAHYLI
EVRAYNGAGFGPPSEHCEMFTRRPPPPDAPRMWRYVSWTGQWLYVWWDHIAYDWFGDISF
PLYYKVMFRKTGYIYGKVYITGWHFMDFPMPQVGDYELMVRGRYEGGDGPVRKIRIKGEG
TMTTPSLGLASMLVLALCIMGGLI
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcttccactggactgcagattctcctcctcctcacctcctccctctccctctccgtg
gcagtcttgttcggtgagccaagaatctatggagaggatgccaccggctatggacccatc
tttgaagaggagcctctcgacgtggtctacatggaggactcccctgacgccaggatatcc
atgaactgcagggcaaggtcgaacccgcccgccatgtacaggtggaggcgtgacaactgg
gagattaagctgatggagcagccggacgagcactacagcttggtggggggcaacctggtc
atcaccaacccccggcagaagaagcacgccggcaactacatctgcgtggccaagaacatc
tacggcacggtcatcagcaaggaggccaaggtcaagttcggattcatggatgagttccca
caggaggacagagaacctgtcattgccaaggagggtcagggggccgtcctcctgtgtgtc
ccccctaagtcgtggccagccgaggtcacgtaccgctggatcttcaacgagttcccggtc
ttcctgcagacggaccgccgacgcttcgtgtcccagcgcaccgggaacctgtacatctcc
cgggtggaggcgcaggacgccgggaactactcctgcttcgtctccagccccgtcatcggc
aagagcgtcttctccaagttcatccccctcatccccacgccgtccgacgaaggggaggag
aggaggtacccagcagacatcgctgtgatgttcccagacaccactgccatgctggcctcc
aacatcacccttgagtgcttcgccctcggcaaccccgtccctgagatcgtgtggaggaag
tacgacagcaccgacctgccggccaaccacgagatcagcgcgtcgggggcgaggctgcac
ctgtacaacatccagtacgaggacgccggcgcctacgactgcgaggccatcaacaccaag
ggcaaggacgtgcacaaagcctgggtctacgtggagtctgctccagagtgggcggagacc
atcaacaacacgcaggtggacctgggctcggagcataccatgcgctgcgtggcgtctggg
aagcccttccccttcatccgctggtacaaagatggttacatgttcgggaaaggagagcta
aagttttccagcataacgtttgatgactcagggatgtaccagtgtctcgcagaaaactac
tacggcatcaagtacgccaacgcagagctacgcgtgattgcctgcgctccgaccttcgag
ctgaacccggtgaagaagcagcttctgggagctcggaacggccgggtggtgatcgagtgt
cggccccgcgcggccccccgaccgcggttcacctggaccaagggcaaggagctgctctac
aacaactcacgcatctcgctgatgtatgacggcagtctggagatcctgaacgccacgaag
aacgatgagggtgtgtacacctgcctggcagagaacgaccgggggaaggccaacagctcc
ggcacgctcaccatcacagaggccacggagctcactgtcctccccgaggacaccatggcc
aaggtgggggaggaggtgatcctggactgcggcgcgacctacgaccccatgctggacatc
gccttcgtctgggccgtggactaccgcctcatcgactttgaggccgagtggcagcactac
gagagagtcgtggatgaggacgagggcaacggttacctgaggatcttgaacgtccaggtg
tggcacgagggccgctacacgtgcacggctcagacggtggtggacaacgccaccgcgtat
gccgacctcaagatcgtaggcgtccccgggcctcccggtgtcctgcgtgtagaggagatc
agagactcctccatcaagctggcgtggagcaaaggaggcgaccacaacagccccatcctc
tactacaccatccagaccagacacttctgggctctgaacgaggacgactggagagtcgcc
accacctctccggcgttcctggacggtaacgcggagatggccgacgtcacggacctgttc
ccctggatggagtaccagttcagggtcatcgccaccaaccagtacggcgccggcgaagcc
agcatcccctccatcaaaatcaagacctgggacgcctctcctgtggtttctccaactgac
gtggccggttatggaggaagagatggagagatcttcatcacgtggaaacccgtcgaaccc
tggtacttctcgggcaagaagtttggctacatcgtggccttcaagccccacgacgcgtac
gactggtggtacgagaccatctcggaccccgagacccggcgctacgtgcaccgggacccc
tacttcgtgcccaccgaggaggacttccaggtgcgggagttccaggtgaagatcaagtcg
ttcaacgtgaagggcgacgggccgtacagccccaccaccgtcgtctactacccgcgggaa
gtgccctcggagcagcccacagacgtctatgcccgaccggtgtcgtctcacgaggcctcg
gtgtggtggctgcccgtggtcgacaccggcacgggcctgcagcagtatatcgaagggtac
caggtgaagtactggcggaagtacgacgacacggagcccggggcaaaccggatcttcgtg
ccggccacggagaaccagacgcgcctggagaacatgctgccggacgcccactacctcatc
gaggtgcgggcctacaacggcgccggcttcggaccgcccagtgagcactgcgagatgttc
accaggagaccgccaccaccagacgcccccaggatgtggcgctacgtcagctggacgggc
cagtggctgtacgtctggtgggaccacatcgcctacgactggttcggagacatctccttc
cccctgtactacaaggtcatgttccggaaaacaggctacatctatgggaaggtgtacatc
acaggctggcacttcatggacttccccatgccccaggttggggactatgagctcatggtc
cggggacgctacgaggggggtgacggaccagtccggaagatcaggatcaagggggaggga
actatgaccacgccttctctaggcctggcctccatgctggtcctggcgctttgcattatg
ggaggcctgatctag
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integrated database retrieval system
