Gadus morhua (Atlantic cod): 115532521
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Entry
115532521 CDS
T10832
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04137
Mitophagy - animal
gmh04144
Endocytosis
gmh04145
Phagosome
gmh04148
Efferocytosis
gmh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115532521 (rab5c)
04145 Phagosome
115532521 (rab5c)
04137 Mitophagy - animal
115532521 (rab5c)
04148 Efferocytosis
115532521 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115532521 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115532521 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmh04147
]
115532521 (rab5c)
04031 GTP-binding proteins [BR:
gmh04031
]
115532521 (rab5c)
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
115532521 (rab5c)
Endosome - Lysosome transport
115532521 (rab5c)
Exosome [BR:
gmh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115532521 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
115532521 (rab5c)
Exosomal proteins of colorectal cancer cells
115532521 (rab5c)
Exosomal proteins of bladder cancer cells
115532521 (rab5c)
GTP-binding proteins [BR:
gmh04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
115532521 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
115532521
NCBI-ProteinID:
XP_030198216
Ensembl:
ENSGMOG00000015059
UniProt:
A0A8C5AIY4
LinkDB
All DBs
Position
2:10368536..10380310
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALSGNKADLSNKRAVDFQEAQSYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKSEPQGAAGAGGRARGGVDLQEAAPQGRASQCCGGGN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcagggagaggaggaccggcacggaccaacggcacggcagccagcaacaagatctgc
cagttcaagctagtgctgttgggggaatcagcagtaggaaaatccagcttggtgctgcgc
ttcgtcaaaggccagtttcatgaataccaggagagcacaattggagctgccttcctcaca
cagacggtatgcctggacgacacaacagtgaagtttgagatctgggacaccgcaggacag
gagcgctaccacagcctcgcccccatgtactacaggggcgcccaggctgccatcgtggtc
tatgacatcaccaatacagatacgttcacgcgtgcgaagaactgggtaaaggagctccag
agacaagccagccccaatatcgttattgcactgtcaggaaacaaggcagacctgtccaac
aaaagagcagtcgattttcaggaagcacaatcctatgcagacgacaatagtttgctgttc
atggagacgtcagccaagactgcaatgaatgttaatgagatctttatggcgatagccaag
aagctccccaagagcgagccccagggggccgccggcgcgggcggacgggccagaggcggc
gtggacctgcaggaagccgcgccacagggtcgcgccagccagtgctgcggtggggggaac
taa
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integrated database retrieval system