KEGG   Gadus morhua (Atlantic cod): 115532521
Entry
115532521         CDS       T10832                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04137  Mitophagy - animal
gmh04144  Endocytosis
gmh04145  Phagosome
gmh04148  Efferocytosis
gmh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115532521 (rab5c)
   04145 Phagosome
    115532521 (rab5c)
   04137 Mitophagy - animal
    115532521 (rab5c)
   04148 Efferocytosis
    115532521 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115532521 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmh04131]
    115532521 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmh04147]
    115532521 (rab5c)
   04031 GTP-binding proteins [BR:gmh04031]
    115532521 (rab5c)
Membrane trafficking [BR:gmh04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    115532521 (rab5c)
 Endosome - Lysosome transport
    115532521 (rab5c)
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115532521 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   115532521 (rab5c)
  Exosomal proteins of colorectal cancer cells
   115532521 (rab5c)
  Exosomal proteins of bladder cancer cells
   115532521 (rab5c)
GTP-binding proteins [BR:gmh04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    115532521 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 115532521
NCBI-ProteinID: XP_030198216
Ensembl: ENSGMOG00000015059
UniProt: A0A8C5AIY4
LinkDB
Position
2:10368536..10380310
AA seq 220 aa
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALSGNKADLSNKRAVDFQEAQSYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKSEPQGAAGAGGRARGGVDLQEAAPQGRASQCCGGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagggagaggaggaccggcacggaccaacggcacggcagccagcaacaagatctgc
cagttcaagctagtgctgttgggggaatcagcagtaggaaaatccagcttggtgctgcgc
ttcgtcaaaggccagtttcatgaataccaggagagcacaattggagctgccttcctcaca
cagacggtatgcctggacgacacaacagtgaagtttgagatctgggacaccgcaggacag
gagcgctaccacagcctcgcccccatgtactacaggggcgcccaggctgccatcgtggtc
tatgacatcaccaatacagatacgttcacgcgtgcgaagaactgggtaaaggagctccag
agacaagccagccccaatatcgttattgcactgtcaggaaacaaggcagacctgtccaac
aaaagagcagtcgattttcaggaagcacaatcctatgcagacgacaatagtttgctgttc
atggagacgtcagccaagactgcaatgaatgttaatgagatctttatggcgatagccaag
aagctccccaagagcgagccccagggggccgccggcgcgggcggacgggccagaggcggc
gtggacctgcaggaagccgcgccacagggtcgcgccagccagtgctgcggtggggggaac
taa

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