Gadus morhua (Atlantic cod): 115532556
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Entry
115532556 CDS
T10832
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Pattern recognition receptors [BR:
gmh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115532556
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Gene cluster
GFIT
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NCBI-GeneID:
115532556
NCBI-ProteinID:
XP_030198273
Ensembl:
ENSGMOG00000028423
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Position
19:4784389..4801258
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AA seq
1070 aa
AA seq
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MKSDWSMANPLNFKDGNPSIEKRQYQKRSKVTSGHSEQHDQTEQTSKSVLPAEPAEHPSL
ARFKNTLKIKTQRVFEGLVQPGNQTPLNEIYTELFIIEGGSGEVNKEHEVRLIEKTYRKP
AKEEKTIKCEDLFKIIHGQKKQKIRTILTIGVAGIGKTILTQKFTLDWAEGKSNHDIHFT
FPLPFRELNLLKNRKFSLVELLHYFFIDTKQAGICQNYQHQVVFILGGLDECRLPLDFKN
NEILTDVTKSTSVDVLLTNLIRGDLLPSARIWITTRPAAANQIPANCVDMVTEVRGFTDP
QKDEYFRKRFREEKLASTIISHVNKSRSLHIMCHIPLFCWVTATVVEDFFRSSRRGERIP
NTLTQMYIHLLRVQSIKGDRKYHWRKDLHLESTRAIIVILGKLAFSQLKKGNLIFYEADL
AECNIPVKAASVYSGVFTQIFKEDYELNHDKVFSFVHLSIQEFLAALHVFLSFKSGVNLL
SEKPPASEANDLLLLCQSAVDQALLSENGHLDLFLRFLLGLSLETNQILVQGLLGPTGSI
PETNQGIVSYIKEKISGDLSPERSINMFFCLNELGDRSLVEEIQQYLTSGSLSRKSLSPS
QWSALAFILLSSEVDVFDLKNYSASEEGLLRLLPVIKASKTSLLNGCHMSERCCEALATA
LSTSSSSLRELDLSSNDLQDSGVKLLSAGLGSPHCRLETLRLKGCHLSERCCKALASVLS
SSSSSLIELDLSNNDLQDSGVKLLSAGLGSPHCRLESLRLTGCNLSEKCCRALASVLRSN
SSSLRELDLSTNDLKDSGVKLLSAGLRSPQCTLETLRLSGCLVTQGGCDSLARALSSNPS
HLKALDLSYNFPGESGFKLLSAGREDPSWKLDILRKMNCEEGVLKPALQKYACDLTLDPN
TANSRLSLSGDREATLVEEYPDHPKRSDTLRQVLCREVLTGRSYWEVVCKGDVSIVVTHR
GRITRSREGYDNRLGSNNKSWSLECHGDRYCACYNGRKTDKRLLPAGSKKVGVYLNRLAG
TLSFYRVSPGVVGSKDTLTHIHTFESTFNQDLYAGFVLLCTGSSATICKL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgactggtctatggctaatcctcttaactttaaagatgggaatccgtctatt
gagaagagacaataccagaagaggtcaaaggttaccagtggtcattctgaacagcatgat
caaacagagcaaacctccaagagtgttcttcctgcagaacctgcagaacatccttctctg
gctagattcaagaatactttgaagataaagacccagcgtgtgtttgagggattagttcaa
ccaggaaatcaaacacctctgaacgagatctacacagagctctttatcatagagggaggc
agtggagaggtcaacaaggagcatgaggtcagactgattgaaaaaacgtacaggaaacca
gccaaagaggaaaaaacaatcaaatgtgaagacctctttaaaatcatacatggacaaaaa
aaacagaagatcagaacaatattgacaattggagttgcaggcattggtaaaaccatcttg
acacaaaagttcactctggactgggctgaaggcaaatccaaccacgacatacacttcaca
tttcccttaccattcagagagctgaatttattaaaaaatagaaagttcagcttggtggaa
ctacttcattacttctttattgacaccaaacaagcaggaatctgccaaaactaccagcac
caagttgtcttcatcttgggtggtctggatgagtgtcgacttcctctggacttcaagaac
aacgagatcttgactgatgtcacaaagtccacctcggtggacgtgctgctgacaaacctc
atcaggggcgacctgcttccctccgctcgtatctggataaccacacgcccggcggcagcc
aatcagatccctgctaactgtgttgacatggtgacagaggtgagagggttcaccgaccca
cagaaggatgagtacttcaggaagagattcagagaggagaagctggccagcacaatcatc
tcccacgtcaataaatcacgaagcctccacatcatgtgtcacatcccactcttctgttgg
gtcactgctacagttgtggaggacttcttcagatcatccaggagaggagaaaggatacct
aataccctgactcagatgtatatccacctcctgagggtgcaatccataaaaggggacagg
aagtatcattggagaaaagatctgcatttagagagtactagagcgatcattgttattctg
ggaaaactggctttttcccagctgaagaaaggcaacctgatcttctacgaggcagacctg
gccgagtgcaacattcctgtcaaagcagcctcagtgtactcaggagtgttcacccagatc
tttaaagaggattatgagctgaaccatgacaaggtgttctcctttgtccatctgagcatc
caggagtttctggctgcccttcatgtctttctgtccttcaaaagtggtgtcaatctgctc
tcagaaaaaccaccagcctctgaggcaaatgatctcctgctcctctgccagagtgctgtg
gaccaggccttactgagtgagaacggacacttggacttgttcctccgcttcctcctgggc
ctctctctggagaccaatcagattctcgtacaaggcctgcttggaccgacaggaagcatc
ccagagaccaatcagggaattgtcagttacatcaaggagaagataagtggagatctttct
ccagagagaagcattaatatgttcttctgtctaaatgagctgggggaccgttctctagtg
gaggagatccagcagtacctgacatcaggaagtctctccagaaaatctctctccccttct
cagtggtcagctctggccttcatcctactgtcatcagaagtggacgtgtttgacctgaag
aactactctgcttcagaggagggtcttctcaggctgctgccagtgatcaaagcctccaaa
acatctctgctgaatggctgtcatatgtccgaaagatgctgtgaagctctggctacagct
ctcagcaccagctcctccagtctgagagaactggacctgagttccaatgatctgcaggat
tcaggagtgaagctgctctctgctggactggggagtccacactgtagactggaaactctc
agactgaaaggctgtcatctgtccgagagatgctgtaaagctctggcctcagttctcagc
tccagctcctccagtctgatagagctggacctgagtaacaatgatctgcaggattcagga
gtgaagctgctctctgctggactggggagtccacactgtagactggaaagtctaaggctg
actggctgtaatctgtcagagaaatgctgcagagctctagcctcagttctcagatccaac
tcctccagtctgagagagctggacctgagtaccaatgatctaaaggattcaggagtgaag
ctgctctctgctggactgaggagcccacagtgtacactggaaactctcaggttgtctggc
tgcttggtcacacagggaggctgtgattctctggccagggctctgagctctaacccctcc
cacctgaaagcgctagacctgagctacaattttccaggagaatcaggattcaagctgctc
tctgctggccgggaggatccatcctggaaacttgacattctcagaaagatgaactgtgaa
gagggagtactgaaaccagccctacagaagtatgcctgtgatctcacactggacccaaac
acggccaacagccgactttctctttctggggacagagaggcgacgcttgttgaagagtat
cctgatcacccaaagagatctgataccttgagacaggtgttgtgtagagaggttctgact
ggccgcagttactgggaggtagtttgcaaaggagatgtttcgatagttgtgacccacaga
ggaagaatcaccaggagccgagagggctatgacaacaggcttggatccaacaacaagtcc
tggagtcttgaatgtcatggtgatcgttactgtgcctgttacaacggtagaaaaacagac
aaacgtctcctgcccgctggctctaagaaagtaggagtgtatctgaaccggcttgctggc
actctgtccttctacagagtgtccccaggtgttgttgggtctaaagacacactgacacac
atccacaccttcgagtccacattcaaccaggacctctacgccgggtttgttttattgtgc
actggttcctcagcgaccatatgtaagctgtag
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