Gadus morhua (Atlantic cod): 115532610
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Entry
115532610 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: very low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
115532610
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115532610
NCBI-ProteinID:
XP_030198342
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Position
19:complement(3954378..3969403)
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AA seq
750 aa
AA seq
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MSPSLVWLSLALSTLLCLLHGAPVQGATPECEANQFQCGNGRCIPSVWKCDGDPDCTDGS
DETSCEKLTCADSDFVCTNGQCVPKRWHCDGEPDCEDGSDESSEICHMRTCRVNEFSCGA
NQCIPVFWKCDGESDCDKGDDEVNCSNITCAPNEFTCASGRCISRNFVCNGEDECGDGSD
EVGCAPSSCGPSEFQCGNASCIPASWVCDEDVDCQDQSDESHTRCGRHPTPPARCSSSEM
QCGSGECIHRKWRCDGDSDCKDGSDESNCPVRTCGADHFKCDDGGCIPGNRQCNGLRECT
DGSDENNCKNVTQCSGPEKFRCRSGECIEMTKVCNKARDCPDWSDEPISECSVNECLLNN
GXCSHMCKDMVIGFQCDCTPGXLIDHKTCGDINECVNPGICSQICINLKGGYKCECHNGY
QMDPTTGVCKAVGKEPCLMFTNRRDIRRLGLERREYTQVVEQXRNTVALDADFNQQTIFW
ADLGQKAIYSTVLGKKAEQGIHTMVIDNMQTPVGIAVDWIYKNIYWSDLGTKTIAVATFN
GTRQKVLFSSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGAGRRTLVETDIQWPN
GITLDLIKGRLYWVDSKLHMLCSVDLNGDNRRKVLQSSEFLAHPFALTVFEDRVFWTDGX
NEAIYGANKFTGSDVVTLASNLYDXQDIIVYHELIQLSGPNWCTEKGENGGCAYLCLPAP
QVNKHSPRYTCVCPQGQELAEDGLRCRPGV
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgtccctggtgtggctctccttggcactgtcgacgctgctgtgcctcctacac
ggcgctcctgtacagggggcgactccggagtgtgaggccaaccagttccagtgtgggaac
ggccgctgcatcccgtcggtgtggaagtgtgacggcgacccagactgtacggacggcagc
gacgagacctcctgtgagaagctgacctgtgcggattctgactttgtgtgcactaatggc
cagtgtgtccccaagcgctggcactgtgacggagagccagactgtgaggatggctctgac
gagagctcggagatctgccacatgcggacgtgtcgtgtgaacgagttcagctgcggggcc
aaccagtgtattcctgtcttctggaagtgcgacggggagagcgactgtgataaaggagac
gatgaagtcaactgcagcaacatcacgtgcgcgcccaacgagttcacgtgcgcgagcggc
cgctgcatctcccgcaactttgtgtgcaacggcgaggacgagtgcggcgacggcagcgac
gaggtgggctgtgcgccgtcctcctgcgggcccagcgagttccagtgcggcaacgcctcc
tgcatccccgccagctgggtgtgtgacgaggacgtcgactgccaggaccaatcggacgag
tcccacacccgctgcggccggcacccgaccccccctgccaggtgctcctccagtgagatg
cagtgcggctcaggggagtgcatccacaggaagtggcgatgcgacggggacagcgactgc
aaggacggtagcgacgaaagcaactgtcctgtgcgtacctgtggggctgaccacttcaag
tgtgacgatggcggctgtatccctggcaaccgccagtgtaatggtctgcgagagtgcact
gacggctcagacgaaaacaactgcaaaaacgtgacccagtgcagcgggccagagaagttc
cgctgtcgcagtggggagtgcatcgagatgaccaaggtgtgcaacaaggcccgagactgt
cccgactggagcgacgagcccatcagcgaatgcagtgtgaacgagtgtctgctgaacaac
ggcngctgctcccacatgtgtaaggacatggtgatcggcttccagtgcgactgcaccccc
ggcnagctcatcgaccacaagacctgcggagacatcaacgagtgtgtgaaccctggcatc
tgcagtcagatctgcatcaacctgaagggaggctacaagtgtgagtgtcacaacggctac
cagatggaccccaccacgggggtctgcaaggctgtgggcaaggagccctgcctgatgttc
accaaccgccgggacatccggcggctgggcctggagcgccgggagtacacccaggtggtg
gagcagnncaggaacacggtggcactggacgcagacttcaaccagcagaccatcttctgg
gcggacctgggccagaaggccatctacagcacggttctgggcaagaaggcggagcagggt
atccacaccatggtcatcgacaacatgcagacgcccgtgggcatcgccgttgactggatc
tacaaaaacatctactggtccgacctgggcaccaagaccatcgccgtggctaccttcaac
ggcaccaggcagaaggttctgttcagcagtggtctgaaggagcccgcctccattgctgtg
gacccgctgtctgggttcctgtactggtctgactggggggaaccagcgaagatagagaag
tcagggatgaatggagccggccgacggaccctggtggagacggacatccagtggcctaac
ggcatcaccctagacctgatcaagggccggctgtactgggtggactccaagctgcacatg
ctgtgtagcgtggacctgaacggggacaaccggcggaaggtcctgcagtcctcagagttc
ctggctcacccctttgccctcaccgtgttcgaggaccgcgtgttctggacggacgggnag
aacgaggccatctacggagccaacaagttcacgggctctgacgtggtgacgctggccagc
aacctgtacgacncccaggacatcatcgtctaccacgagctcatccagctctccggtccc
aactggtgtacagagaagggggagaatgggggctgtgcctacctgtgtctccccgccccc
caggtgaataagcactcccccaggtacacctgcgtgtgtccccagggccaggagctggcg
gaggacggactgcgctgccgaccaggtgtgtga
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