Gadus morhua (Atlantic cod): 115532759
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Entry
115532759 CDS
T10832
Name
(RefSeq) integrin beta-2-like
KO
K06464
integrin beta 2
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04145
Phagosome
gmh04514
Cell adhesion molecule (CAM) interaction
gmh04517
IgSF CAM signaling
gmh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115532759
04517 IgSF CAM signaling
115532759
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115532759
09142 Cell motility
04810 Regulation of actin cytoskeleton
115532759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115532759
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmh04147
]
115532759
04515 Cell adhesion molecules [BR:
gmh04515
]
115532759
04090 CD molecules [BR:
gmh04090
]
115532759
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
115532759
Exosome [BR:
gmh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115532759
Cell adhesion molecules [BR:
gmh04515
]
Integrins
Integrin beta subunits
115532759
CD molecules [BR:
gmh04090
]
Proteins
115532759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
PSI_integrin
EGF_integrin
vWA_SIBA-E
EGF_2
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
115532759
NCBI-ProteinID:
XP_030198501
Ensembl:
ENSGMOG00000018542
LinkDB
All DBs
Position
20:complement(6299080..6310377)
Genome browser
AA seq
789 aa
AA seq
DB search
MLEISRWLLFLLLLQKGRYGFSQEPERKEGEECFKTGISSCGDCISSGQFCVWCKQLNFT
KPGEQEAVRCDTRSQLMARGCLDDSIISPENSFKVVQNTPLSGSFNQRQTQQEAIQLAPQ
KVHLKLRPGMPQTFTLSFKRVEGYPMDLYYLMDLSYSMEDDLRSIKVLGAELFKALRSIT
EHAQIGFGAFVDKTVLPFTNTNKRKLANPCPKTEKNCQPAFGYRHVLSMTANENSFNKEV
NKQGISGNLDPPEGSLDAMMQAAVCGSKIGWRNSSTRLIVLTTDAGFHMAGDGKLAGILQ
PNDELCHLDSNVNARNNEQDYPSVGQLAMQLEKHNIQPIFAVTSEVADVYKELSKMIPKS
EVEVLSADSKNIVSLIRLAYDRLSSKVTMAHDDLPPNVRVTYTPICPKRGPAGEEEGVCN
GVLVGQQIAFNVTVTAERCMREQDFTISPLGIKDTLKVTLSTTCDCECNDPQDKQHPQCN
SKGQVNCGICRCSVGLVGRTCECSVGDKDENALRASCRRENGTECEGRGTCVCGRCDCHL
TESGTSYHGDFCECDDDHCEKFANKLCGGNGRCLCGKCICNQGYEGSACHCKTSDDGCRT
PGGSVCNDRGKCRCNQCECNEGYQRPFCEVCHGCQDPCQTKQTCIECLFQMGVSGKNCTT
ACMDSVKHKIVDMFTMTKKPCKLKDSDGCWITFKMEQLVGVDNYLAEILRNKECPELPNL
YAIVGGSIAGVAAIGLLIMLLIKMLIYLKDKEEFKKFESEKARSKWAKADNPLFQNATTT
VANPTFTGE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaattagtagatggctgctcttccttctgctcttgcagaagggtagatatggg
ttttcccaagaacctgaaagaaaagaaggagaggaatgctttaagaccgggatctcctcc
tgtggagactgtatcagctccggccagttctgtgtgtggtgcaaacagctgaatttcacc
aaaccgggcgagcaggaggcggtgcgctgcgacacccggtcccagctgatggcgcggggc
tgtttggacgactccatcatctccccggagaactccttcaaggtggtgcagaacacgccg
ctgtcaggctccttcaaccagaggcagacccagcaggaggccatccagctcgctccccag
aaggtccatctcaagctacgaccggggatgccgcaaacgtttaccttgtccttcaaaaga
gtggagggctaccccatggacctctactacctcatggacctttcctactccatggaggat
gacttgaggagcatcaaagtgctgggcgcagagctgttcaaggccctgaggagcatcaca
gagcacgcccagataggattcggggctttcgtggataagacagtgctgccctttaccaac
accaacaagaggaagctggcgaacccctgcccaaagacggagaagaactgccagccggcc
ttcggctaccgccacgtcctcagcatgaccgccaacgagaattctttcaacaaggaggtg
aataagcagggcatctccgggaacctggaccccccggagggcagcctggacgccatgatg
caggccgcagtctgtgggagcaagataggctggagaaacagcagcactcggctcatcgtg
ctcaccaccgacgcaggcttccacatggccggggacggcaagctggccggtatcctgcag
cccaacgacgagctgtgccacttagacagtaacgtcaacgccaggaacaacgagcaggac
tacccatctgtgggtcaactggcaatgcagttagaaaagcacaacattcaaccgatcttt
gctgtgacatcagaagtagcagatgtttacaaggaactcagtaaaatgatccccaaatcg
gaggtggaagtgctgagtgcagattcaaaaaatattgtctctctaattaggctcgcctac
gataggttgtcttccaaagtaaccatggcccacgatgacctgccgcctaatgtaagagtt
acctacaccccaatctgccctaaacggggtccggcaggtgaagaggaaggagtctgtaac
ggcgtgctcgtggggcagcagatcgccttcaacgtcaccgtgacggccgagaggtgcatg
agggagcaggatttcaccatcagcccgcttggcatcaaagacaccctgaaggtgacccta
tccaccacgtgtgactgcgaatgtaacgatccacaggacaaacagcatcctcagtgtaac
tctaaaggccaggtcaactgtggcatatgcaggtgcagtgtgggcttagtgggccggacg
tgtgagtgctcagtgggggacaaggacgagaacgcgctccgggcttcctgccggagggag
aacggcacagagtgcgagggccggggaacttgtgtctgcggccgctgcgactgccacctc
acggagagcggcaccagttaccacggcgacttctgcgagtgcgacgacgatcactgcgag
aagtttgcaaataagctttgtggaggaaacggcaggtgcctctgtggcaaatgcatatgc
aaccaggggtacgagggctcggcctgccactgcaagacttccgacgatggctgcaggacg
cccgggggcagcgtgtgcaacgacagaggcaaatgcagatgcaaccagtgtgagtgtaat
gaaggctaccagcggccgttctgcgaggtgtgtcacggatgccaggacccctgccagacc
aaacagacgtgcatcgagtgcctgtttcagatgggcgtttcggggaagaactgtacaacg
gcctgcatggacagcgtgaaacacaagatagtggacatgttcaccatgaccaagaagccc
tgcaagctgaaggactccgacggctgctggatcaccttcaagatggagcagttggtgggg
gtggacaactacttggctgagatcctgcgaaacaaagagtgccccgagctgcccaacctg
tacgccatcgtcgggggctccattgcgggagtggctgcgatcggcctcctcatcatgttg
ctgatcaagatgctcatatacctgaaggacaaggaggagttcaagaagttcgagagcgag
aaagccagatccaagtgggccaaggccgacaatccattgttccagaatgcaaccaccacc
gtggccaacccaaccttcaccggggaatga
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integrated database retrieval system
