KEGG   Gadus morhua (Atlantic cod): 115532770
Entry
115532770         CDS       T10832                                 
Name
(RefSeq) ras-related protein Rab-5B-like
  KO
K07888  Ras-related protein Rab-5B
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04137  Mitophagy - animal
gmh04144  Endocytosis
gmh04145  Phagosome
gmh04148  Efferocytosis
gmh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115532770
   04145 Phagosome
    115532770
   04137 Mitophagy - animal
    115532770
   04148 Efferocytosis
    115532770
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115532770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmh04131]
    115532770
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmh04147]
    115532770
   04031 GTP-binding proteins [BR:gmh04031]
    115532770
Membrane trafficking [BR:gmh04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    115532770
 Endosome - Lysosome transport
    115532770
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115532770
  Exosomal proteins of other body fluids (saliva and urine)
   115532770
  Exosomal proteins of colorectal cancer cells
   115532770
  Exosomal proteins of melanoma cells
   115532770
GTP-binding proteins [BR:gmh04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    115532770
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16
Other DBs
NCBI-GeneID: 115532770
NCBI-ProteinID: XP_030198511
Ensembl: ENSGMOG00000006918
LinkDB
Position
20:complement(13893023..13897910)
AA seq 216 aa
MSSRGSGGRTNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQ
RQASPNIVIALAGNKADLAEKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSNRACCGGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagctccagaggcagtggaggacgcaccaatggcacgctaccgcagaccaagatctgc
cagttcaaactggttctgctgggagacatggcggtgggcaagtccagtctggtgttgcgc
ttcgtcaagggacagtttgacgagttccaggagaccactataggagctgcattcctggcc
cagtccgtgtgtctggatgacaccacggtgaagtttgagatctgggacacggccgggcag
gagcgataccacagcctggctcccatgtactaccggggagctcaggcggccattgttgtc
tttgacatcaccaagccggagacgtttgaccgagccaaggcctgggtgaaggagctgcag
agacaagctagcccgaatatcgttattgccctggcagggaacaaggctgacctagctgag
aaaagactagtggagtatgaggaagcccagacctatgctgaagacactggcttactcttt
atggagacttctgctaagacggccatgaacgttaatgaactcttcctggccattgctaaa
aagatgccaaaaacagacacccagaacccaacgcatgcagcacggcaccgtggagtcaac
ctccaggacccagatgctcactcgaaccgggcctgctgtggtggaaactag

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