Gadus morhua (Atlantic cod): 115532907
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Entry
115532907 CDS
T10832
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115532907 (tbc1d4)
Membrane trafficking [BR:
gmh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115532907 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
115532907 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
115532907 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
CENP-H
PTB
DUF5748
DUF4249
COG4_N
DUF4806
Motif
Other DBs
NCBI-GeneID:
115532907
NCBI-ProteinID:
XP_030198806
Ensembl:
ENSGMOG00000019558
LinkDB
All DBs
Position
20:6411739..6444713
Genome browser
AA seq
1251 aa
AA seq
DB search
MESQEEKENSPPKSDKRFSLWYIGSSALDRRTTLPMLPWLVAEIRRKSEKNDSGPIQARE
VQLVLIPPFIRCVPSNNANSSVFIFEHKAQLISRFIHNSNDLTYFAYLIRGQQDNPESQM
SCHVFKACDPNQVSEVISSIRQVSKSALKGDAKPKQETDEAFYNSQKYEVLYCGKVTVGQ
KKAPTTLVDDCIEKFRQHEVDRKRQRLLSGQRASADGSPVEFTVGGEGDPLSAVLNESLE
DMESLQAELPDARGRSLSGSASQGSLRGGFPECILEDSGFEEQQEFRTRCSSLAGGIQRR
PRETAMMPPARRRHASAPNHVQPSDADKNRTMLFQVGRFEVNLISPDSKSVVLEKNFKDI
SSCSQGIKQTDHFGFICRDPVESGPSQYVCFVFQCANESLVDEVMLTLKQAFSTAATLQS
NKTPVQLCEACPMHGLHKLCERIEGLYPPKAKIGIQKYLSQMSENDQVDIFERVTKMKPS
SEQEENEVVILHLRTLCETKQKSHLHIGECPQNSPNSTAGDGVGGRFKLDALKNKARTSL
TSSLENIFTRGASRMRDRLGSIGSMSSFDRQDEESPGHSPPAPASPSGFQDDDPGAEGLQ
FRRRAHTFSHPPVKKRISFEGPPANQSKHPPLRRQQSLAPELLQHSPAGVSRTRSVSESE
TSSFSLASSFSAPTFLKSFYQGSLGSLADSGSLKSNGEGRKRTLSACSNDSVGAAEVATP
RKVSWRQKIFLRVASPMNKLPASMQDPDPCEARDLLPLSPHLSPLGCQMSRSTSQDGGPP
GGRPRRTVADYRLLWRNAIHQQILLLRMEKENQKLEASRDELHIRKVKLDYQEVGPSSKE
VLAQWEKRLTAPGRTTVLQRTEELHSALCQGVPKGRRGEVWLLLSHQHRLRHRLDQRQLF
PPDTPYQDLLKQLTAQQHAILVDLGRTFPNHQYFSAQLGAGQLSLYNLLKAYSLLDTEVG
YCQGVSFVAGILLLHMSEEQAFDMLKFLMYDLGFRRQYRPDMVSLQIQMYQLSRLLHDYH
RRLYTHLEEQEIGPSLYAAPWFLTLFASQFPLGFVSRIFDFLFIRGTEVVFKVALCLLSS
HEEEIMECDSFESIVDYLKTTIPSMTEAQMEQTIAKVSEMDISKQLHTYEVEYHVLQDEM
VEGGPLAEDSERLEKLEKTNVQLKRQNMELLEKLQAARQKIQTLETNVESFLSRESKMKH
SIRSLEQERTSYQKTAERMRSCLPADALADVEMTQIKMGPNGKAKPVAKKP
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcaagaggaaaaggaaaacagcccaccgaaatcggacaaacgattcagtttg
tggtacatcggttcgtccgctttggacagacggactaccttgcccatgctgccgtggctg
gttgccgaaattcggaggaagagcgaaaaaaacgattctggtcccatccaggctagagaa
gttcagcttgtgctcatacctccattcatcagatgcgtcccttccaataacgccaactca
tctgtcttcatatttgaacacaaagcacagctcatttctcgattcattcacaacagcaat
gatctcacttactttgcttaccttatccgggggcaacaagacaaccccgaatcccagatg
tcgtgtcacgtcttcaaggcttgtgaccccaaccaggtttctgaggtcatcagcagcatt
cgccaagtgtccaaatcggcgctgaagggtgacgccaagcccaaacaggagacggacgaa
gccttctacaactcccagaagtacgaggtcctgtactgcggcaaggtgacggtgggccag
aagaaggcccccaccacgctggtcgacgactgcatcgagaagttccgacagcacgaagtg
gaccgcaagcgccagcgtctgctcagcgggcagcgggcctccgccgacggcagcccggtg
gagttcaccgtgggcggggagggggaccccctgtctgccgtcctcaacgagagcctggag
gacatggaaagcctccaggcggagctcccggacgctcgaggaaggagcctgtccggcagc
gccagccagggcagcctgaggggcggtttcccagaatgcatcctggaggactccggcttc
gaggagcagcaggagttccgcacgcgctgcagcagcctggcgggcggcatacagaggcgg
ccccgggagacggccatgatgccgcccgcgcgccgccgccatgccagcgcgcccaatcac
gtgcagccgtccgacgccgacaagaaccgcaccatgctcttccaggtgggccggtttgaa
gtgaacctcatcagtccggacagtaaatcagtggtgctggagaagaactttaaggatata
tcgtcctgctctcaggggataaagcagactgaccactttggattcatctgtcgtgacccg
gtagagtccggccccagccagtatgtgtgctttgtcttccagtgtgccaatgagtccctg
gtggacgaggtgatgctgaccctgaagcaggccttcagtacggctgccaccctgcagagc
aacaagactccggtgcagctgtgtgaagcctgccccatgcacggcctgcacaagctctgt
gagaggatcgagggcctttaccctcccaaggccaagattggcatccagaaatacctctcg
caaatgagcgagaacgatcaggtggacattttcgagcgagttacgaaaatgaagccctcg
tcggagcaagaggagaacgaggtggtgatccttcatctcagaacgctgtgtgaaaccaaa
cagaagtcccacctccacatcggcgagtgcccgcagaactcgccaaacagcacagcggga
gacggcgtcggtggtcgtttcaaactggacgccctgaagaacaaagctcgcacctctctc
accagctccctggagaacatcttcacgcggggtgccagccggatgcgcgaccgcctgggg
agcatcggtagcatgagcagcttcgacagacaggacgaggagtccccgggtcactccccg
ccagcgcccgcgtcgccgtccggtttccaagacgacgacccgggggccgagggcctgcag
ttccgccggcgcgcccacaccttcagccacccccccgtcaagaagcgcatctccttcgag
ggcccgccggccaaccagagcaagcaccccccgctccgtcggcagcagtcattggctccc
gagctactgcagcacagtcccgcgggcgtgtcgcgaacccgaagcgtctcggagagcgag
acctcctccttcagcctcgcttcctccttctccgctcccactttcctgaaaagcttttac
caaggctctctgggctcgctggcagacagtgggagtctcaagagcaatggggagggcagg
aagaggaccctgtcggcctgcagcaacgactctgtaggcgcagcggaggtcgcgaccccc
cgcaaggtctcctggaggcagaagatcttcctgagagtcgcctcgcccatgaacaagctg
cccgcgtccatgcaggacccagacccgtgtgaagcccgggacctgctgcccctgtccccc
catctgagccccctgggctgccagatgtcccgctccacgtcccaggacggcggccccccc
ggggggcgtccacggaggacggtggccgactaccggcttctgtggaggaacgccatccac
cagcagatcctgctgctgcgcatggagaaggagaaccagaagctggaggcgagtcgtgac
gagctgcacatccgcaaggtgaagctggactaccaggaggtgggcccctcctccaaggag
gtgctggcccagtgggagaagaggctgaccgccccgggacggaccaccgtactgcagcgc
actgaggagctgcactctgccctctgccagggcgtgcctaagggccggcgcggcgaggtg
tggctcctcctgtcccaccagcaccgcctgcgccaccggctggaccagcgccagctcttc
ccgcccgacaccccctaccaagacctgctgaagcagctcacggcccagcagcacgccatc
ctggtggatctaggccggaccttcccaaatcaccagtacttctcagcccagctaggagca
gggcagctttctctttacaatctcctgaaggcctactctctgctggatacagaggtgggc
tactgccagggggtgagcttcgtggcagggatcctgctgctccacatgagtgaggagcag
gcctttgacatgctcaagttcctcatgtatgacctgggcttccggcgccagtacagaccc
gacatggtctctctgcagatccagatgtaccagctctcccgcctgctgcacgactaccac
cgccggctgtacacccacctggaggagcaggagatcgggcccagcctctacgccgcgccc
tggttcctcacgctcttcgcctcgcagttccccctcggattcgtctcacgcatctttgat
ttcctcttcatccgaggcacggaggtggtgttcaaggtggcgttgtgcctcctcagcagc
catgaggaggagataatggagtgtgacagcttcgagagcatcgtggactacctgaaaact
acgattcccagcatgaccgaggcacagatggagcagaccatcgctaaggtgtctgagatg
gacatctccaagcagctccacacgtacgaggtggagtaccacgtcctccaggacgagatg
gtggagggcgggcccctggcggaggactctgagcggctggagaagctggagaagaccaac
gtccagctgaagaggcagaacatggagctgctggagaagctgcaggcggcgaggcagaag
atccagacgctggagacgaacgtggagagcttcctgtcccgggagagcaagatgaagcac
tccattcgctccctggagcaggagaggacgtcgtaccagaagacggccgagcgcatgcgc
tcctgtctccctgccgacgccttggcagatgtggagatgacccagatcaaaatgggcccc
aacggaaaagccaaacccgtggccaagaagccctga
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