KEGG   Gadus morhua (Atlantic cod): 115533020
Entry
115533020         CDS       T10832                                 
Symbol
rev1
Name
(RefSeq) DNA repair protein REV1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    115533020 (rev1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gmh03400]
    115533020 (rev1)
DNA repair and recombination proteins [BR:gmh03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    115533020 (rev1)
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C REV1_C UBM BRCT_2 BRCT POLH-Rev1_HhH LIG3_BRCT IMS_HHH HHH_5 PTCB-BRCT DUF7674 Cdd1
Other DBs
NCBI-GeneID: 115533020
NCBI-ProteinID: XP_030199043
Ensembl: ENSGMOG00000012562
LinkDB
Position
20:complement(14747273..14758744)
AA seq 1411 aa
MSRDGSSKKRANAGDDNGWAQRGGYMAAKVSKLHEQFHLDAREKQKEGGGSQIFHGVAIY
VNGYTDPSADELRRLMMLHGGQFHVYYSRSITTHIIASNLPNNKIKELKGEKVVRPAWIT
DSVKAGCLLSYLQYQLYAKQKGLNFAGVSLLQNHEGAGPSHGLPKQNLLLNRPSSKEAAP
GRMNGGLHHEKTSSDCRSTSAPTPHHDPPHPGHVQPPPSSTTAADLVSHQGPQHNHPGTG
PVYHSNPTRTRPLSDQSPGQPSPGCMPPPPPPPPYSHTHSSVSQTQPGPHNDRKAFHTQA
QNSLSFNPPKHCYGERDIRLNGSNAVLESASEVPCPVKVKPGEGKPLLNGHAHPVNGALK
PVDPHPFPHRAPVDNVAQSPLKRPEAGAPSPAARSPPAAPRRPTHADPYSFPHSPPRQDD
RLPVSPESPSSREAGESRLKPPPPTYQEAIAATQSHPPPPSLLPPHPCRPAALTEKPQLP
FPPRSPVRLNGSHHDAFSSDLAAPRPSIASPHPPPAADPPVAGAPSSKPSAKLMVQTGGI
ISEYYSHSRFHQISTWRIGFSEYVNELHSKRRTAGDVPLPGKERLRRCAPQFPSQESDTG
APLSVKSCILHVDMDCFFASVGIRDRPDLKGKPVAVTSNRGPGRVALRPGANPQLEQQYY
QRKRSNADPESLQADLKESREQDTSVLSMAEIASCSYEARAAGVRNGMFFGKAKQLCPAL
QSVPYDFEAYKEVAMAMYETLASYTHDIEALSCDEVLIDATTLLLELGIGPEDLARAIRE
DIKEKTGCSASVGMGSNILLARLATRKAKPDGHYMLRSEEVDDFIRELSVTSLPGVGPVM
GRKLSGMGVKTCGDLQHVAQSQLQKAFGPRTGQTLFRFCRGLDERLVRYEKERKSVSAEM
NYNIRFTGAEEAEAFLTSLSSEVQRRLQEAGQRGRRVTLKVMVRKAGAPAESAKYGGHGI
CDHLARTVTLAQATDSGPLIASAVVKLYHAMKLPAQELRGVGIQVQQLEGARSAPENHKR
SIKEMLLGPGLPARPPRAAADPGSEQVKPTASGLPSGSPPLQLSPAEPVPGTSRDPHTPH
HARTTRLNLSIEVPSPSQVDRSVLEALPADLREQVEQSWTRRDRRPSNALHHAAGPSSPP
FGSGPLSDLLSGSALSVRPAGTLLLEIPNQPGHSGPTGIVLELPDFSQVDPDVFAALPRE
LQDELRSAYHRKQNAQPQAKLAEQRNPLLQLKQPEAGVGVARVKRRYKRKNAVSPAKKVP
SPQKRHVTGNSPAKVLPPSMRSREVAGGLKMDNGPSTSSLNQETPEVLSPFPPRAAPTLA
GASEMTDIRTLLREWVTSISEPMEEDVLQVVKYCTDLIEDKDLEKLDLVIKYMKRLMQQS
EESVWSMAFDFILDNVQMVVQQAYGSTLKMA
NT seq 4236 nt   +upstreamnt  +downstreamnt
atgagtcgagatggttcgtcaaagaagagagccaatgctggagatgacaatggttgggct
cagagaggtggctacatggctgccaaggtctctaagcttcacgaacagttccaccttgat
gccagagaaaagcagaaggaagggggtggctcccaaatcttccatggagtggccatctat
gtcaacggctacacggaccccagtgcagacgagctgcgccggctaatgatgctgcatgga
ggccagttccacgtctactactcccgctccatcaccactcacatcatcgccagcaacctt
cccaacaacaaaatcaaggagctcaaaggggagaaggttgttcgcccggcgtggatcact
gacagcgtcaaggctgggtgcctcctgtcctacctgcaataccaactctatgctaaacag
aaaggcctgaacttcgccggcgtcagtcttctgcagaaccacgaaggggctggacctagc
cacgggctccccaagcagaacctcctcctaaaccgtccgagctcaaaagaggcggccccg
ggacgcatgaacgggggcctccaccacgagaagacctcctccgactgccgtagtacctct
gctcctaccccccaccatgacccgccccatccagggcacgtccagccccccccgagtagc
accaccgcggctgacctcgttagccatcagggtccacagcacaatcaccctggcacgggg
ccggtgtaccacagcaacccaacacgcacccgacctctctctgaccaaagccctggccag
ccctcgcctggatgcatgccgcctcctcctcctccaccgccctacagccacactcattct
agtgtgtcgcagacccagcccgggcctcacaacgacagaaaagcattccacactcaggcg
cagaacagcttgtccttcaacccccccaagcattgctacggggaacgggacattcgattg
aatggatccaatgctgtattggagtcggccagtgaggtcccctgtcctgtcaaagtaaaa
ccaggggagggcaagcccctgctgaacggacacgctcaccccgttaatggtgccttaaag
cctgtagaccctcacccctttcctcaccgagccccagtggataacgtagcccaaagccca
ctcaaacgcccggaggctggggctccaagtcccgccgcacgcagtccgcccgccgcgcca
cgcaggccgacccacgcagacccctactcgttcccccacagccccccgaggcaagacgac
cggctccccgtctcacccgagagccccagctcccgggaggccggcgagtcgcgactgaaa
cccccaccccccacgtaccaggaggccatcgcggccacccagtcccatcctccacccccc
tcactcctgccaccccacccctgtcggccagccgcccttaccgagaaacctcagctcccc
ttccccccacgctctcccgtgcgactcaacggaagtcaccacgatgccttttcgtccgac
ctcgctgcgccaagaccgagcatcgcatcacctcaccccccaccggcggcagaccccccc
gtcgcaggggccccgtcgtcgaagccgtccgcaaagctgatggtgcagacgggggggatc
atctcagagtactattcccattcacgctttcaccaaatctccacctggaggattgggttc
tccgagtacgttaacgaactgcatagcaagcggcggacggctggagacgtccccctgccg
gggaaggagcgactgaggagatgtgccccacagttccccagccaagagtcggacacgggg
gctccgcttagcgtgaagtcatgtatcctccacgtggacatggactgcttcttcgcgtcc
gtcggcatccgagatcgaccagacctgaaagggaagcccgtggctgtgacaagtaaccga
gggccgggtcgcgtagcgctgagacctggggccaatcctcagttggagcaacagtactac
cagaggaaacgctctaatgctgaccctgaatcgctacaggctgatttgaaggagagcaga
gagcaggacacctctgtcctctccatggccgagattgcttcatgcagctatgaagccagg
gcggccggggtgaggaatggcatgttctttggcaaggcgaagcagctgtgtcccgcactg
caatctgtcccatacgactttgaggcttacaaggaggtggctatggccatgtatgagacc
ctagcaagttacactcatgacattgaggccctgagctgtgatgaagtgttgattgatgcc
accaccttgctattagagttgggcatcggccctgaggatctggcccgggccatcagggaa
gacatcaaggagaaaacaggatgctctgcctcagtgggcatggggtccaatatcctgttg
gcccgcctggccacgagaaaagccaagccagatggccactacatgttgaggtcagaggaa
gtggacgattttatccgggagctatcggttaccagtttaccaggcgtgggacccgtcatg
gggaggaagttgtcgggcatgggcgtgaagacgtgcggggacctccagcacgtggcccag
tcccagctgcagaaggcgttcggaccgcgcacgggccagaccctattccgcttctgccgg
gggctggacgagcggctggtgcgctacgagaaggagcggaagtcggtgtcggcggagatg
aactacaacatccgcttcaccggggcggaagaggcggaggctttccttaccagcctctct
tcggaggtccagcggcgtctgcaggaggcgggacagaggggtcgccgcgtcaccctaaag
gtcatggtccgcaaggcgggggcaccggccgagtcggcgaaatatggcggccacggtata
tgtgaccacctggccaggacggtgacgctggcccaggccacggacagcggcccgctcatc
gcctctgcagttgtcaagctgtaccacgccatgaagctgccggcccaggagctgcgaggc
gtgggcattcaggtccagcagctggagggagctcgcagtgcccctgagaaccacaaacgc
tccataaaggagatgctgctgggcccggggctccctgccagacctcctcgtgcagcagcc
gaccccggttcagagcaggtaaagccaactgcctcaggcctcccctcaggctctcctccc
cttcagctgtcccctgctgagcctgtcccggggacaagcagagacccacacaccccgcat
cacgccagaaccacacggctcaacctaagcattgaagtcccttcgccctcccaggtcgac
cggtccgtattggaagcccttcccgctgacctccgagagcaggtggagcagtcctggacc
cgacgagaccggagacccagcaatgccttacaccacgcagcaggtccctcctcccctccc
tttggttctggccctctctccgatctcctctccgggtcggcgctgtctgttcggcctgca
ggcacgctgctcctagagatccccaaccagccgggccactcgggcccgaccggcattgta
ctggaattacccgatttctcacaggtcgaccccgatgtgtttgccgccctgcccagagag
ctgcaggatgagcttcgctctgcctaccaccgcaaacagaacgctcagccccaagcaaag
ctggcggaacaaaggaatccacttttgcaactgaaacagccagaagctggcgtcggcgtg
gcaagggtaaagcgccgctacaagagaaagaatgcagtgagccctgctaagaaagtacct
tccccgcagaagaggcatgtgaccgggaacagcccagccaaagtcctgccaccgtccatg
agatccagggaggtagcgggtggactcaagatggataacggtccttccacctcatcccta
aatcaggaaaccccagaagtcctttctcccttccccccccgtgcggcccctaccctggcc
ggagccagtgagatgaccgacatcagaacactgctcagagaatgggtcacaagcatatca
gaacccatggaggaggacgtactgcaagtggtgaaatattgcactgacctcatagaggac
aaagacctggagaagcttgacctcgtcatcaagtacatgaaacgactcatgcagcagtcg
gaggagtctgtgtggagcatggcattcgacttcatccttgataacgtccagatggttgtg
cagcaagcttatggaagcaccctgaagatggcgtga

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