Gadus morhua (Atlantic cod): 115533021
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Entry
115533021 CDS
T10832
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmh03021
]
115533021 (aff3)
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115533021 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
Motif
Other DBs
NCBI-GeneID:
115533021
NCBI-ProteinID:
XP_030199044
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All DBs
Position
20:complement(14760002..14778530)
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AA seq
1276 aa
AA seq
DB search
MPTVLSGKRELSIVRFLPRCASSQDAGSHKHQCAKDIQGDMTQSWPSQHALGGDQAQRFL
YNPKDAKQHTVLQRQARGDVQMRMTRPPHVAPHKSMLADDLDLSSDDEDNRRANRQSSWD
DHSLTAPRTNTHSARVRHSSSDSSGSESSGESESSSQRSRSPVPEASSDPGSPGNARPLP
TEETHHPSTAQWQLDKWLKKARKKSSSIQPDPRETSSLIVPASLPSPQADRAPSPARSWD
HAQDYSPSQSLIPSPHFNYSPGSSPLLSPGYSFCPSPFPSTCPSPSPRHSPDRSPLHSAC
PSPHGGPRACPSPIGRHPPRCPSPSASPSCYILVPSPGQETQTRPRLTGSPHRTKVRPWI
APLCGSEPKGKQRDSPCLKAPARQPRPKTKAVHDQTQSKSKVGSTTALNSAPSLNRKARS
HPLPPPGSTHHLPPAPKAKHAPSRFEHAPGSRPGHSSRPVPVPGLQPSSQRSPTRTKPLP
AYVSGIEANSQADHSSQSVSTSKAPANPSAAPPSRGSSRALIAKAQPRERPAPAPSHVSQ
ANASQKRSQAKALKEVVPTQTEDRRKDRKEGHRHRERRERKDDRRLAEEQLLRHSWIQSS
EEEEEEEQEEEAAGGAKERQRREEEEREEKRRRRRWEEQQHRGEWQPLQTKQRSHAAATV
NTVNTATVTATTTTATAATTLERQRLTGQPKQRGRTTKKHRKSEQERATPPDSGSPAPLY
PSAPLISSSSSSSSFSSSSPSSSGSESESECRAAITQVPAVSTSNKRPAPKRPEPGPPGR
PKDSRPRSAVPPGPKAGSASEGQPGEGRKKLYTLVPFGRSEQATAPSHRGLRNLRVQIDL
CLLKRVPDSTPTTPTTTTTTAATTTTTANHSQPPTSCPSALVKAKTGGAMRHLHVPETDN
RDSKRKRKAENGVSHRERKRANDPPGQTVSAAQKPLNRHLATETLHNGYLEEYLDTKRQL
SPLSPLSDSPEPTKAPLKEREKDRDFAMKPKLEVESVGVSGKPYSMSKSWVPPTGQAAAH
QGSMPNPETPHHAEYYMHEAKRMKHRADAMVDKLGKAVNYVDAALSFMECGKAMEEGPLE
AKSPYTMYSETVELLRYAMRLKSHSGPGARQEDKQLAVLCFRCLALLYWQMFRLKKDHAL
KYSKALLDYFKSSPKVPATAPAWSDSGKSTKGPASLMPSSQATHSLGSPGASTAPSLISI
PQRIHQMAANHLNITNSVLYSYEYWEVADNLAKENKEFFNYLNTLSGPLTLHSSIGHAVQ
YTRQALQWIRISAKLS
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgccgacagtcctcagcggcaaaagggaactttccatcgtccgttttctgcctcgatgc
gcatcttctcaggacgcaggaagtcacaaacaccagtgtgccaaagacattcaaggggac
atgactcagtcttggccctcccagcatgccttagggggtgaccaggcccagcgcttcctc
tacaatcccaaggatgcaaagcagcacacagtgctgcagagacaagcccggggcgatgtc
cagatgcgaatgacccgaccccctcatgtggcaccccacaaatccatgctggctgacgac
ctggatctcagcagcgatgacgaggacaatcgcagggccaatcgtcagtcctcctgggat
gatcacagcctgacggctccgcgcacgaacacccatagcgcgcgagtgcgacattccagc
tccgactcctctggctcagagtcgtcgggcgagtcggagagcagtagccaacgctcccgg
agtcccgtccccgaagccagctctgacccggggtcgcctggcaacgcacggccgctgccc
accgaggagacacaccacccctctaccgcccagtggcagctggataagtggctcaagaag
gcccgcaaaaaatcctccagcatccaaccagatcccagggagacctccagcctgatcgtc
ccggccagcttgccctccccgcaggcggacagagccccgtccccagcccggtcctgggac
cacgctcaggattacagccccagccaaagcctcatccccagcccgcacttcaactacagc
cccgggagcagccctttgctgagtcccggctacagcttctgccccagcccgttccccagc
acctgtcccagcccgagcccccgacacagccccgaccgcagcccgctccacagcgcctgt
cccagcccacacggcggccccagagcctgccccagccccataggccggcaccctccgagg
tgtcccagccctagcgcttccccttcttgctacattctcgttcccagtcctgggcaggag
acccagacacgacctcgcctgacaggcagcccccaccggacaaaagtgaggccatggatc
gcacctctgtgtggttctgaacccaaaggcaagcagagagacagtccctgtcttaaagcg
ccggcccgacagccaagacctaagactaaagccgtacatgaccaaacccaaagcaaatcc
aaagtcgggtccacgacagctttgaactctgcccccagtcttaaccgcaaggcgaggtct
caccctcttccaccgccgggctccactcaccaccttcctccggctcccaaagccaaacac
gcgccgtccagattcgagcacgcacctgggagcagaccgggtcacagctctcgccccgtc
cccgtgcctggccttcagcccagctcacaacgaagccccaccagaacaaagcccttgccg
gcctatgtctctggcatagaggccaacagccaggctgatcacagctcacagtctgtatct
acctccaaagcgcctgccaatcctagcgcagcgcccccttccagaggtagctctcgggcc
ttgatagccaaggcccaacccagggagcgtccggctcctgccccctcccacgtgtcccag
gctaacgcctcccagaagaggagccaggccaaggcgctcaaagaagtggtcccgacccag
acagaggacaggaggaaagacaggaaagagggacaccgacacagggagcgacgggagcga
aaggacgacagaagactggcggaggagcagctcctgaggcattcctggatccagagttcc
gaggaggaggaggaggaggagcaggaggaggaggcagcagggggcgccaaggagaggcag
cggcgagaggaggaagagagagaggagaagagacgcaggagaaggtgggaggagcaacag
cacaggggtgaatggcagccacttcaaaccaaacagagaagccacgccgccgccaccgtc
aacaccgtcaacaccgccaccgtcaccgccaccaccaccaccgcgaccgccgccaccacc
cttgagagacagcgccttactggacagcccaagcagcgtgggaggaccacaaagaagcac
cgaaagagtgagcaggagcgagcgacgccgccagactccggctccccggcgcctttatat
ccctccgctcctctcatctcatcttcctcctcctcctcctcattctcctcttcctcgccc
tcctcctcgggatcagaatccgagtcggagtgtcgggccgccatcacccaggtcccagcg
gtctccacgtccaacaaaaggcctgcccctaaaaggcccgagccgggtccgccgggcaga
cccaaagacagcaggcccagaagcgccgtccccccaggccctaaggccggcagcgccagc
gagggacagccgggtgaggggagaaagaaactctacaccctggtcccgttcggacgcagc
gaacaagccacagcgccttcccaccgggggctaaggaatctgagggtgcagatagacctt
tgtctcctcaagagagtccctgactcgactcctactactccgacaactactactactact
gcggctactactacgactacggccaatcacagccagccacccacttcctgtccctctgcc
ctggtcaaggccaagacaggcggagccatgagacacctacatgtcccggagacagacaac
agggacagcaagcggaaacgcaaggctgaaaatggtgtgtcacacagagaaagaaagagg
gcaaatgatcccccgggccaaactgtgtcggcggctcagaagcctctgaacaggcacctg
gcaaccgagactctgcacaacgggtacttggaggagtacttggacactaagaggcagctg
tctcctctgtcaccgctatctgacagcccggaacccaccaaggctccgctcaaagagagg
gagaaagacagagatttcgccatgaagcccaagctggaggtggaaagcgtaggcgtttca
gggaagccttattcaatgtccaagtcctgggtcccacccacgggacaggccgcggcccac
cagggctccatgcctaaccccgaaactccccaccatgccgagtactacatgcacgaggcc
aagaggatgaagcaccgcgcagacgccatggtggacaagctggggaaggcggtgaactac
gtcgacgccgccctgtccttcatggaatgtgggaaagccatggaggaggggcccctggag
gccaagtccccttacaccatgtactcggagacggtggagctcctcaggtacgcaatgagg
ctgaagagccactctggccccggggctcgacaggaagacaagcagctggccgtgctttgc
ttccggtgccttgcgctgctgtactggcagatgtttcgactgaagaaggaccacgcgctg
aagtactccaaagctctgctggactacttcaagagttctcctaaagtgcctgccacagcc
cccgcctggagtgactctgggaagagcacaaagggacctgcttccttgatgccttccagc
caggctacacacagtctggggtcacctggggccagcacagccccgtcgctcatcagcatt
cctcaacgcatccaccagatggcagcaaaccaccttaacatcaccaacagcgtcctctat
agctacgaatactgggaagtggccgacaacctcgccaaggagaacaaggaattcttcaac
tacttgaacactttgtccggcccattgactctccacagtagtattggccatgcagtccag
tacaccagacaggctctccagtggatacgaataagtgccaaactcagctag
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