KEGG   Gadus morhua (Atlantic cod): 115533104
Entry
115533104         CDS       T10832                                 
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
gmh  Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmh04131]
    115533104 (stxbp5l)
Membrane trafficking [BR:gmh04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    115533104 (stxbp5l)
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    115533104 (stxbp5l)
SSDB
Motif
Pfam: LLGL WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd Lgl_C Beta-prop_WDR19_1st Synaptobrevin Beta-prop_EML Beta-prop_VPS8 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 115533104
NCBI-ProteinID: XP_030199207
Ensembl: ENSGMOG00000015790
LinkDB
Position
20:complement(5131785..5254910)
AA seq 1268 aa
MKKFRKVLDGLTTSSPGGTLGSPSYSSAAGTPTASTPREIDVQETLVSENFQLCKTVRHG
FPYQPTALAFDPVQKIVAIGSRTGGVRILGRPGVDCYCHHETTAAVLQLQFLINEGALVT
ACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESFV
LSGYVIMWNKAIELCTKTHPGPVVHLSDSPKDEGKLLIGFESGTVVQWDLRMKKVDFRIY
YDEAIHSVSWHHEGKQFMCSHSDGSLTLWNQRNTARPFQITFPHGKIQKDGRKESCKPIL
KVEYKTSRNSSEPFVIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDHPIVEFMVLCETPY
NNEVQEPYAVVVLLEKDFIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFADCPPDIIPI
LYSIGAKHKKTGFSQKEWPITGGTWNVGSQTYPEIIITGHADGSIKFWDASAITLQMLYK
LKTSKVFEKPKPGEVRGGDLVEEDPYAVQMVSWCPQSRIFCVVGISAHIILYRFSKYEAN
TPIVSLEVRLQCDTEEVLSPSETENQPCFPEPGSHSPVQASPGSGASEGVKDSIPCLKVK
ERPVRVPPGYQAELVVQLLWVDGEPPGQITSLDINSAYGLLAFGNSNGLAVVDYLQKTLL
LCLSTLDLYGAADPYQRLTRSPRKNRQSTSDFCMRGLSSFYSDSKKRIRTSYQSLTELSD
NQQSVDMERSKSPTSVHYPPSSLHSEGRMPRGDPAAAPRASPCSPVFHLLDNVKGPGRKL
SLPTDLKTDLDHVNGHCTSPTSQPCSAGKPRIPIGPEGSRLTRRGPGRPPFRKAQSAACM
EISLPVSHTEVGHTSRRAMLQQLHGVSMYSHDEHHSPAAYCWSEKGAESRENSFSRSRSS
SVSSIDRETKEAVTTLQFGESYGRKGDAQPTPCLWVGTSLGVVLLIPMSVPTEEEERLEE
PVTIGPGGAVLLMKGSILRLAFLDLAGAIIPGPHEVWRDPNGPEDPDRPRRRKLINFSPW
SSQDGCAEGHLAVVCSERQAKVLLMPSQACLFVHNITESSFVLRADVVTACNSVCLACFC
ANGHIMTLSLPSLRPLMDVNYLPMTDMRIARTFCFTNGGQALYLSSPTEVQRITFSQDMC
ENLQEMLGELFTPIETPEVQNRGFLKGFFGGNAQNLDREELFGEASAGKASRSLAQHIPG
QVGMEGMKAAAGGVVGDLARARIALDERGQRLGELEDRTAHMMTSAETFSKHAHELMLKC
KDKKWYQF
NT seq 3807 nt   +upstreamnt  +downstreamnt
atgaagaagttccgtaaggtcctagacggcctgaccacgtcgtcccccggaggcactctg
ggctccccttcctacagcagtgcggctgggacccccactgcgtctactcccagggagatt
gatgtccaggagacgctggtctcggaaaactttcagctatgtaagacggtgcgccacggc
ttcccctaccagcccacggcgctggcctttgaccccgtgcagaagatcgtggccatcgga
tcccgaaccggaggcgtacggatactgggacggcctggggtcgactgctactgtcaccat
gagaccacagccgccgttctccagcttcagttcctcatcaacgagggggcgctggtcacg
gcgtgcgccgacgacacgctacacctgtggaacctgcggcaaagacgacccgcaatcctg
cactcgctcaagttcaacagggagaggatcaccttctgccaccttccgttccagagcaag
tggttgtacgtgggcacggagagaggcaacactcacatcgtcaacatcgagtcctttgtc
ttgtccggctacgtcatcatgtggaacaaggccatcgaactatgtactaaaacacacccg
ggcccggtggtccatctgagcgacagccccaaggacgaaggaaagctgctcattggcttc
gagagtgggaccgtcgtgcagtgggacctccgaatgaagaaggtcgacttccggatctac
tacgacgaggccatccactcggtgagctggcaccacgaggggaagcagttcatgtgcagc
cactctgacggcagcctgaccctgtggaaccagaggaacaccgcccgccccttccagatc
accttcccccatggaaagatacagaaagatgggagaaaggagtcgtgcaaaccgattctc
aaggtggagtacaagacttcaaggaacagcagcgagccctttgtcatcttctcggggggg
ctctcgtacgacaaggcgggccgccggcccacgctgaccatcatgcacggcaaggccatc
accgtgctggagatggatcaccccatcgtggagttcatggtgctctgcgagactccgtac
aacaacgaggtccaggagccatatgcagtcgttgtgcttttggagaaggacttcatcgtg
gtagacctaacgcagagcaacttccccatctttgagaacccgtaccccatggacatccat
gagtctcccgtcacctgtacggcctattttgcagactgccctccagacatcattccaatc
ctgtactccataggtgccaaacacaaaaagacgggcttcagccagaaggagtggccaatc
actggagggacctggaacgtcggctctcagacgtacccagagatcatcatcacaggacat
gccgacgggtcgataaagttttgggatgcgtctgcaatcacgttgcagatgctctacaag
ttgaagacctccaaggtgttcgagaagcccaagcccggggaggtgcgggggggcgacctg
gtggaggaggacccctacgccgtgcagatggttagctggtgtccccagagccgcatcttc
tgcgtggtgggcatctccgcccacatcattctgtaccgcttcagcaagtacgaagccaac
acgcccatcgtgtccttggaggtgcgtctgcagtgcgacacggaggaggtcctgtccccc
tcggagacggagaaccagccttgtttccctgagcccggctcccactccccggtccaagcc
agcccagggagcggcgcctccgagggggtcaaggacagcatcccctgcctgaaggtgaag
gagcgtccggtacgggtgcctccagggtaccaggctgagctggtggtccagctgctctgg
gtggatggggagcctcccggtcagattaccagtctggatatcaactctgcttacggcctg
ctggcctttgggaacagtaacggcctggcggtggtggactacctccagaagacgctcctc
ctgtgcctgtccaccctggacctctacggcgccgccgacccctaccagcggctcacccgc
tccccccgcaagaacaggcagtccacctcggacttttgcatgcgtggcctgtctagcttt
tattcagattcaaagaaaaggatccgtacttcgtaccagagtctcacggagttgtctgac
aaccagcagtcggtggacatggagcgcagcaagtcgcccacctcagttcattaccccccg
tcctccctgcactccgagggccgcatgccccgtggtgatcccgcggccgcgcccagagcc
agcccctgcagcccagtctttcacttgctggacaatgtaaagggacccggcagaaagtta
agtctgcctacagatcttaagactgatcttgatcatgtcaatggacattgcactagtccc
acctcccagccctgctcggcggggaagccccgcatcccgatcggtcccgaggggtcccgg
cttacccgcagagggcccggcaggccgcccttccgcaaggcccagtccgccgcttgcatg
gagatctctttgcctgtgtcccataccgaagtaggtcatacgtccaggagggccatgctc
caacagttgcacggcgtcagtatgtactcccacgacgagcaccactcgcccgccgcctac
tgctggagcgagaaaggagccgagagcagggagaactccttcagccgctcccgcagctcc
agcgtgtccagcatcgaccgggagaccaaggaggcggtgaccacgctgcagttcggcgag
tcgtacggccgcaagggcgacgcccagcccaccccgtgcctgtgggtgggcaccagcctg
ggcgtggtgctcctcatccccatgtccgtgcccaccgaggaggaggagaggctggaggag
cccgtcaccatcggccccggcggggccgtcctattgatgaagggctcaatcctgcgcctg
gccttcctggacctggccggggccatcatcccgggcccccacgaagtgtggcgggacccc
aacggccccgaagacccagaccgaccccggcggcgcaagctgatcaacttctccccgtgg
tcgtcgcaggacggctgcgccgagggccacctggccgtggtgtgctccgagcggcaggcc
aaggtgctgctcatgccgtcccaggcgtgccttttcgtgcacaacatcaccgagtcgtcc
tttgtgctgcgcgccgacgtggtgaccgcgtgcaacagcgtctgcctggcctgcttctgc
gccaacggccacatcatgacgctcagtttacccagtctcagaccgctgatggacgtcaac
tacctgccgatgaccgacatgcgcatcgccagaaccttctgcttcaccaacggcgggcag
gcgctctacctcagctcccccaccgaggtccagagaatcaccttcagccaggacatgtgt
gaaaacctgcaggagatgctgggagagctgttcacacccatagagacgcccgaggtccag
aaccgaggcttcctcaagggcttcttcggagggaatgcccagaaccttgaccgagaggag
ctcttcggcgaggcgtcggcgggcaaggcctcgcggagcctggcccagcacatcccgggc
caggtgggcatggagggcatgaaggcggcggccggtggggtggtgggggacctggcgcgg
gcgcgcatcgccctggacgagaggggccagcggctgggcgagctggaggaccgcaccgcc
cacatgatgaccagcgccgagaccttctcaaagcacgcccacgagctgatgctgaagtgt
aaagacaagaagtggtaccagttctaa

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