Gadus morhua (Atlantic cod): 115533289
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Entry
115533289 CDS
T10832
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04010
MAPK signaling pathway
gmh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115533289
04020 Calcium signaling pathway
115533289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115533289
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115533289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
115533289
NCBI-ProteinID:
XP_030199574
LinkDB
All DBs
Position
2:complement(4226785..4334325)
Genome browser
AA seq
2433 aa
AA seq
DB search
MVCNPWFEHVSMLVILLNCVTLGMFQPCEDVTCQTDWCLILQVLDDCIFAFFAVEMVIKM
MALGIFGSKCYLGDTWNRLDFFIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPS
MRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLGEDIPTIYNVSMS
SYYMSEEGEESPFICSAARENGMLRCHDVPAFSVAGEECSLDARTQGSSAIGQAAVAVVA
AASRNGCVNWNQYYNICRAGDNNPHKGSVNFDNIAYAWIAIFQVITLEGWVDIMYYVMDA
HSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENALMREQRARYMSNDSTLASY
SEPGSCYEEMLRYVSHLYRKLRRRVQRIYSGWHSKRRKKVNPNGGGNGGGNGGGTSSHSL
ARGCGGAGPAASAPWLRPIHNLLQHHQHHHCHLSNGGKHPSPATSPTTGRGLEELEMRSL
VARAGSGNGNGAGGGGGGDSPVVTQGMGALLGRLNGGMNYPTILPSFVCSYGSKTPPPHA
QHCGPSPDHHPPHHLASEHTDTLSKLHQLMGQHSRQRLLYQLAGVVPSPLLLELLSCPMC
ARSLESLELELGELETGPRGGDTDGLHHDYTQGAELRTGRGRSSRRRNGHTHEPKNRVVL
LWRRFRDKLKRIVDSKYFNRGIMIAILVNTLSMGIEYHKQPEELTDILEISNIVFTSMFV
LEMVFKLLAFGLFGYIRNPYNIFDSIIVIISVWEIIGQADGGLSVLRTFRLLRVLKLVRF
LPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFSLQTENGDTIPDRKNF
DSLLWAIVTVFQILTQEDWNVVLYNGMASTSPLAALYFVALMTFGNYVLFNLLVAILVEG
FQAEGDANRSESDDEKKSETFEEDEKVEQLRDTELKMYSLMMTANGHVDMRGTLAPPIIM
RTAATPMPTPKSSLGAESVLGSGIIFGEVGPCFGEAGQGYYSEAGSVRRGESCHGSPASR
EPSMAYDQRSLVSSPGRRSPLAPRGSASSWGSRRSSWNSLSRAPSLKRRDPSGERESLLS
GDPGGRGHIDADDDSPEEEDEEEEEEEEEGEENEREENDDGEEEREAGTGERGCRWGGRP
GHLDLLPAATPSPSRAAAAAAAEYGDCNGGSLTYDPHVSTDLKDNFSPEDDIDDDSSICF
RLKKQLMSKKPRWCQEHDDWALYLFSPQNPVRMWCQGMISHRMFDHVVLVFIFLNCITIA
LERPDIQPHSTERVFLSVSNYVFTVIFLAEMAVKVMALGFCWGEQSYLQSSWNVLDGVLV
FVSLVDILVSLASTGGNRILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGN
IVLICCAFFIVFGILGVQLFKGKFYICEGLDTRNITNKSDCSLAGYRWIRRKYNFDNLGQ
ALMALFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVG
VVVENFHKCRQNQEEEEARLREEKRLRMMEKKRRSKENGGAEAQQRPYYADYSPLRLYIH
TLCTSHYLDLFITIIIGINVVTMSMEHYNQPRYLEEILKYCNYVFTCIFVIEALLKLVAF
GLHRFFKERWNQLDLAIVALSIMGITLEELEINAALPINPTIIRIMRVLRIARVLKLLKM
ATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLECNDDNPCEGLSRHATF
ENFGMAFLTLFRVSTGDNWNGIMKDTLRECRVEDRQCLTYLPLVSPLYFVTFVLMAQFVL
VNVVVAVLMKHLEESNKEAKEDAEMDAEIALEMEMERQRRLSTGSNHSSVGGTYVGPRPN
SPGQEEEVQCTNPNLLSPRKMSVSRMHSLPNDSYMFQPVRPASAPYPLEEPGLGPQQHIS
GSVTSVHSQPCEIRTLLQVPGVSPLPSPRVPPPLPRIAPPTPSPSPMALRRQVAVKLDSV
ESQGCDPQQLLQDRPDPLPLSPPPPSSPLALLLLPPPPASPLSFPAPPASPHYLPRPASL
RRPRPRPPPAARDPADEEVSQITGSTLSLSRGDAEGPGPEAGGAKVCRSHSLSPYTSPFS
FDSCIAPFPPLPPLPPPPAPPAAGGGGGGGGGGGGGRALGLPEGGGAFRKRRSGKPLPAL
PTETSAPLPGYHDDQRRHSIEVCSADPLEAAAAAAAFPPGDPYRLLPGPGGGARRGFPTR
VQSMGGGCQRKKRLNPPCISVHPPAERDHAPPAPAGPPTPPPPPPSDCSVMLRRRPLSSD
LTLSATWAADAAADARPPAADHVPLRAHPPLARTLTPEPYLRTCARAHAAARTHPSPIPG
PNIFVQPHAPVLASPAHFPPLTHTLSLSAQCSPIRGDYMPLPQFTFDQSEAVYMSGLSAG
IPDADAANCPSSPFDSRLEDRAGFSAKNRRTAQ
NT seq
7302 nt
NT seq
+upstream
nt +downstream
nt
atggtctgtaacccgtggttcgagcatgtgtccatgctggtgatcctgctcaactgtgtg
actctggggatgttccaaccctgcgaagacgtcacctgccagacggactggtgcctcatc
ttacaggttttggacgactgcatcttcgccttcttcgcggtggagatggtcatcaagatg
atggccctggggatcttcggctctaaatgttacctcggcgacacatggaaccggcttgac
ttcttcatcgtcatggcggggatgatggagtattctctggacggtcacaacgccagtctc
tccgccatccgtacggtcagagtgctccgtccactaagagccatcaacagagtgcccagc
atgcgtatcctggtgactctgctgctggacacgctgccgatgctggggaacgttctcctc
ctctgcttcttcgtcttcttcatcttcggcatcgtgggcgtgcagctgtgggcggggctt
ctgcgcaaccgctgcttcctgggagaggacattccgacgatatacaacgtgtccatgagc
tcctactacatgtcagaggagggcgaggagagccccttcatctgctcggccgcccgcgag
aacggaatgctccgttgccacgacgtcccggccttcagcgtggccggcgaagagtgctcg
ttggacgcccggacccagggctcgtccgcgattggccaggctgcggttgctgtggtggcg
gcggccagcaggaacggctgcgtcaactggaaccagtactacaacatttgtcgggcggga
gacaacaacccgcacaagggctcggtcaacttcgacaacatcgcctacgcctggatagcc
atattccaggtcatcacgctggagggatgggtagacatcatgtactatgtcatggacgct
cactccttctacaatttcatttatttcatattgctcatcatagtgggctccttcttcatg
atcaacctctgcctggtggtcatcgccacccagttctcggagaccaagcagcgggagaac
gcgctgatgcgggagcagcgcgcccgctacatgtccaacgactccacgctggccagctac
agcgagccgggctcctgctacgaggagatgctacgctacgttagccacctgtaccgcaag
ctccggagacgggtccagaggatatactctggctggcacagtaaacgccgtaaaaaggtg
aaccccaacggcgggggcaacggcgggggcaacgggggcggaaccagcagccacagcctg
gcacggggctgcgggggggcggggccggcggctagcgccccctggctgcggcccatccac
aacctgctgcagcaccaccagcaccaccactgtcacctcagcaacggggggaagcacccc
tcgccggccacctcgcccaccaccggtcgcggcctggaggagctggagatgaggtccctg
gtggcccgggcggggagcgggaacgggaacggtgccggcggcggcggcggcggtgactcg
cccgtcgtcacccaggggatgggggccttgctgggtcggctgaacgggggcatgaactac
cccaccatcctgccctcgttcgtgtgcagctacggcagtaagacccccccgccccacgct
cagcactgtgggcccagcccggaccaccaccccccccaccacctggcctcggagcacacc
gacacgctcagcaagctgcaccagctcatgggccagcacagtcgtcagcggttgctgtac
cagctggcgggcgtggtccccagccccttgctcctggagctgctcagctgccccatgtgt
gcccgcagcctggagagcctggagctggaactgggcgagctggagacggggccccgcggg
ggagacacggacggcctgcaccacgactacacccagggggcggagctgcggacggggcgt
ggccggagcagccggcggcgtaacgggcacacgcacgaacccaagaaccgggtggtgctg
ctgtggcgacgcttccgggacaagctgaagaggatcgtggacagcaaatacttcaaccgg
ggcataatgatcgccatcctggtgaacacgctcagcatgggcatagagtaccacaagcag
ccggaggagctgaccgacattctggagatcagcaacatcgtgttcaccagcatgttcgtg
ctggagatggtcttcaagctgctcgccttcgggctcttcgggtacatcaggaacccctac
aacatcttcgacagcatcatcgtcatcatcagcgtgtgggagatcatcgggcaggcggac
gggggcctgtcagtgctcaggaccttccgtctgctgcgggtgctgaagctggtgcgtttc
ctgccggccctgcggcggcagctggtggtcctgatgaagaccatggacaacgtggccacc
ttctgcatgctcctcatgctcttcatcttcaccttcagcatcctgggaatgcatctcttc
ggctgcaaattcagcctgcagacggagaacggagacaccatccccgaccgcaagaacttt
gactcgctcctctgggcaatcgtcaccgtgtttcagatcctgacccaggaggactggaac
gtggtgttgtacaatggcatggcctccacgtcgccgctcgccgcgctctacttcgtcgcc
ctcatgacgttcggcaactacgtcctcttcaacctgctggtggccatcttggtggagggc
ttccaggcggagggcgacgccaacaggtctgagtcggacgatgagaagaagtctgaaacc
tttgaggaggacgagaaggtggagcagctcagagatacagagctgaagatgtactccctg
atgatgacggccaacgggcacgtggacatgagaggtaccttggctcctcccataattatg
cgaacggcggccacacccatgcccacacccaagagctcactgggcgccgagtcggtcctg
gggtcggggattatctttggagaggtggggccttgcttcggagaggcggggcaagggtac
tactctgaggcgggcagcgtccgtcgcggagaaagctgtcatgggagtcccgcctccaga
gaaccttccatggcatacgaccagcgctccctggtgtcgagccctggccgtcgctcgccc
ctggccccccgcggctcagccagctcctggggcagtcggcgctccagctggaacagcctg
agccgcgcgcccagcctcaagaggcgggaccccagcggcgagcgcgagagcctgctgtcc
ggagaccccggggggcggggccacatcgacgccgacgacgacagcccggaggaggaagac
gaggaagaggaagaggaggaggaggagggggaggagaacgagagggaggagaacgacgac
ggcgaggaagagagggaggcggggaccggggagagggggtgccgctggggcgggaggccg
ggtcacctggacctgctgccggcggccacacccagcccgtcccgcgccgccgccgccgcc
gccgcggagtacggagactgcaacgggggctcgctgacctatgacccccatgtgagcacc
gacctgaaggacaacttctcgcccgaggatgacatcgatgatgacagttccatttgcttc
cggctcaagaagcagctgatgagcaagaagccccgctggtgccaggagcacgacgactgg
gccctgtacctgttctccccccagaacccggtccgtatgtggtgtcagggcatgatatct
cacaggatgtttgaccacgtggtgctggtcttcatcttcctcaactgcatcaccatcgcc
ctggagagaccagacatacagccccacagcacggagcgcgtgttcctgagcgtctccaac
tacgtgtttaccgtcatcttcctggcagagatggccgtcaaggtcatggcattgggcttc
tgctggggggagcagtcctacctgcagtccagctggaacgttctggacggggtgctggtg
tttgtgtccctggtggacatcttggtctccttggcctctacggggggcaaccgaatactg
ggaatccttagggtgctccgtctgctacgcacgctgcgccccctcagggtgatcagccga
gctccaggcctaaagctggtggtggagaccctcatcacctctctgaggcccatcgggaac
atcgtgctcatctgctgcgccttcttcattgtcttcggcatcctgggggtgcagctgttc
aaggggaagttctacatctgcgagggcctagacaccaggaacatcaccaacaagtctgac
tgcagcctggccggctaccgctggatcagacgcaagtacaactttgacaacctgggccag
gcactgatggctctgtttgtgctgtcctgtaaggacggctgggtcaacatcatgtacgac
ggtctggatgccgtaggagtggaccaacagcccgtgaggaaccacaacccgtggatgctg
ctgtacttcatctccttcctgctcatcgtcagcttcttcgtgctcaacatgttcgtgggc
gtggtggtggagaacttccacaagtgcaggcagaaccaggaggaggaggaggcgcgcctg
cgggaggagaagaggctgcggatgatggagaaaaagcgcaggagtaaggagaatggaggg
gctgaggctcagcagaggccgtactacgccgactattctccactgcgtctgtacatacac
acgctgtgcaccagccactacctagacctcttcatcaccatcatcatcggcatcaacgtg
gtcaccatgagcatggagcactacaaccagccacgttacctggaggagatcctcaagtac
tgcaactacgtcttcacctgcatcttcgtgatcgaggctctgctgaagctggtagccttc
ggactgcaccgcttcttcaaagaaagatggaaccagctggacttggctatcgtagcgttg
tctatcatgggcatcaccctggaggagctggagataaacgcagctctgcccatcaacccc
accatcatcaggatcatgagggtgctcaggatagcacgggtgctgaagctcttgaagatg
gccacggggatgagagctctgctggatactgtgatgcaggcgctgcctcaggtggggaac
ctggggctgttgttcatgctactcttcttcatctacgctgcgctcggagtcgagctcttc
ggcaaattggagtgtaatgacgataacccgtgcgaggggctgagtcgacacgccacgttt
gagaactttgggatggctttcctcacgttgttcagagtgtctactggggacaactggaat
ggaatcatgaaggacactctgcgtgagtgtcgtgtggaggaccgtcagtgcctcacctac
ctgccgctggtgtctccgctctactttgtcaccttcgtgctgatggcccagtttgtgctg
gtcaacgttgtggtggccgtgctgatgaagcatctggaggagagcaacaaggaggccaaa
gaagacgcagagatggacgcagagatcgccttagaaatggagatggagaggcagcgcagg
ctgagtactggatccaatcacagctcagtgggagggacttatgttgggccacgccccaac
tcacctggacaggaggaagaggtgcagtgcaccaacccaaacctgctgtctcccaggaag
atgtctgtatccaggatgcactctctgcccaacgacagctacatgttccagccggtgagg
cctgctagcgccccctacccactggaggagccgggtctcggcccacagcagcatatctca
ggttctgtgacgtcggtccactcccagccgtgtgagatccggaccctgctgcaggtgccc
ggtgtctcccccctgcccagcccacgggtgccccctcccctcccccgcatcgccccgccc
acacccagcccctcccccatggccctgcgtcgacaggtggcagtgaagctggactccgtg
gagtcccagggctgtgatccgcagcagctgctccaggacagaccggaccccttgcccctc
tcccctccgccgccctcctccccgctggctctgctcctcctcccaccccctcctgcctcc
cctctgtcgttccctgccccccccgcctccccccactacctgccccgccccgccagcctg
cgccggccgcggccccgcccgcccccggcggcccgcgacccggccgacgaggaggtgagc
cagatcaccggctccacgctcagcctgtcccggggggacgccgaggggcccgggccagag
gcgggcggggccaaggtctgccgcagccactccctgtcgccctacacctctcccttctcc
ttcgactcctgcatcgcccccttccctcccctcccgcccctcccccctcccccggcgcct
cctgctgcaggaggaggaggaggaggaggaggaggaggaggaggagggcgcgcgctgggc
ttgcccgagggcggcggcgccttccggaagcgccggtccggcaaaccactgccggcgctg
ccgacggagacgtcggcgccgctgcccggttaccacgacgatcagcgccgtcactccatc
gaggtgtgctcggccgacccgctggaggcggcggcggcggcggcggcgttcccaccggga
gacccctaccgcctcctcccggggccgggcggcggggcgaggagggggttccccaccagg
gtgcagtccatgggggggggctgccagcgcaagaagagactcaacccgccctgcatctcc
gtgcacccgccggcggagcgggaccacgcccccccggcgcccgccggcccccccactccg
ccgccgccgccgccatcggactgcagcgtgatgctgaggaggaggccgctgtcctccgac
ctgacactctccgccacctgggccgccgacgccgcggccgacgcccggccccccgccgcc
gaccacgtgccgctccgcgcccacccgccgctggcgcgcaccctcaccccggagccgtac
ctgcgcacgtgtgcgcgggcgcacgccgccgcacgcacgcacccctcgccgatccccggt
ccgaacatcttcgtccagccgcacgcgcccgtcctggccagccccgcccacttccccccg
ctgacgcacaccctctccctgtccgcccagtgctcgccgatcagaggggactacatgccc
ctcccccagttcacttttgaccaatcggaggccgtgtacatgagcggcctctctgcgggg
ataccggacgcagacgccgccaactgcccctcgtcgcccttcgacagcagactggaggac
agggcggggtttagcgccaagaacagacggacggcccaatag
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integrated database retrieval system
