Gadus morhua (Atlantic cod): 115533310
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Entry
115533310 CDS
T10832
Name
(RefSeq) toll-like receptor 13 isoform X1
KO
K18808
toll-like receptor 13
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gmh04054
]
115533310
Pattern recognition receptors [BR:
gmh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
115533310
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
ThsB_TIR
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
115533310
NCBI-ProteinID:
XP_030199614
Ensembl:
ENSGMOG00000023329
LinkDB
All DBs
Position
20:complement(16985501..17007923)
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AA seq
963 aa
AA seq
DB search
MKTEIAMPLRGICFCSFGILYLFLNSYIRPTTGYVMKNCWVTQNAKADCRKFGFKVFPKD
IPARVTKILLQGNNISKLNERDLENLPNLLYIDLSHNLISKIDSGSFVRQISLEVLHLEN
NKLRNIQEGMFDGLVHLTLLWLNFNQIQTVAPASFKSLSKLMILGLGHNKLHNLANILQH
TPHLHSLIIAANEMSTFHSWELSNKSTELVTLDLSQNELMAFRLTADIFPNLTRLNLEDS
IENGIVWEMNDTSYLSSVSELDISGVRSSLHGLQDVLETINSSLSYLKLNHVNNNLQALI
NISCKNPLLSGFEIRNNGIKHIRPDMLHLCTNLKLLDIGLNEITEISNKSFQSLRQLHTL
IIHSNRLTSVPYAIRNTQISKLDLSCNNISVIDCDDFANMTGLKVLHLYKNHLSALKDCV
FKDLVNLKELMLQNCSIDQLNGALKKNMPNLIHLSLLNNQLTVLDHGEFKALNSLQNLTL
EGNKLNKLKNGTFFGLSSLTHLSLQSNEITEISNGAFADLKALKTLNLNCNHLKYASVER
ISYPPFVELSQLDTLLFTAQKKIHKRALPQNFLHGLTNLSVLDIRGNEFASLHPHTFNYT
PNLNELILSQNDITDIPDNLFSPIQKLKSLWISQTNLRSLDFLLHANLTELEFLQVGKNV
FSVIREPVMLSLTALNILDMKGNSFTCNCDNAWFLQWVISNKQTQVVDAYNFECNYPPNL
KGRKLLEIGLSSCTVDMGFIFYISTACTVIMTIAVSFTHHFLQWHLVYAYYLMLAILYNS
KNKDKRAHQYDAFVSYNANDEGWVLGELLPKLEDEQGWRLCLHHRDFQPGKPIMENITDA
IYGSRKTICVVSRDYLESEWCSREIQVASFRLFDEQKDVLILVFLEEIPMQQLSPYYRMR
WLLKRQTYLSWSHALAHPNLFWEKLRQALETREHPMGEHIRLTVEDGPPGERPGPRIPIA
SLA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagaaattgcgatgcctctaaggggaatttgtttctgttcatttggaatatta
tatttatttttgaacagttatattcgtcccactactggctacgtgatgaagaactgctgg
gtcacacagaacgcaaaggccgactgtaggaaattcggtttcaaagtgtttccaaaggac
attccagcaagagtcacaaaaatactcctgcagggaaacaacatttctaaactaaatgaa
agagatttggaaaatttaccaaatctgttgtacatagacctgagtcacaacttgatctcc
aagattgattctggcagttttgttcgtcaaatctctctagaggtgttgcatttagagaac
aataagcttagaaatatacaggagggtatgtttgatggcctggtccatctcacacttttg
tggctgaatttcaatcagatccaaacagtagcaccagcctctttcaagtctctgagcaag
cttatgattttgggcctaggccataacaaactgcacaacttagcaaacatcttgcaacat
acaccacatttacactccctaatcattgcagcaaacgagatgtccacttttcattcatgg
gagctgtcgaataagtctacagaacttgttacacttgatctgtctcaaaatgagctcatg
gcctttaggctcactgcagatatctttcccaacctcacaaggttgaaccttgaggatagt
atagagaatggtatcgtctgggagatgaatgacacatcgtaccttagcagtgtgtccgaa
ctagatatcagtggggttcgctcctcattacatggactgcaggacgttctcgagacaatt
aactcctcactgagttatttgaagctaaaccatgtgaataacaacctgcaggctctcatc
aatatttcctgcaaaaacccattgctgagtggatttgaaatccgaaataacggcatcaaa
catataagaccagacatgctgcacctctgcactaatctgaaactgttggacatagggttg
aatgaaataactgaaatctcaaacaaatcgtttcaatctcttaggcagcttcacacttta
atcattcattctaaccgtctcacatcggtcccctatgccataaggaatactcaaatctca
aaactggatctcagctgcaataacatcagtgtgattgactgtgatgattttgctaatatg
accggtctcaaagttctccatctatacaaaaatcatctttcggctctcaaggattgtgtt
ttcaaagatttggtcaatttaaaggaactgatgttgcaaaactgcagcattgatcagtta
aacggcgccttaaaaaaaaacatgccaaatcttatacatctttctttattaaacaatcaa
ctcactgttctagatcatggagaatttaaagctctgaattccctccagaatttgacatta
gaagggaataaattaaacaaacttaaaaatgggactttttttggactgtccagtcttaca
catctttctctccaatcaaatgaaataactgaaatttcaaacggtgcgttcgctgacttg
aaagctttaaagactttgaatttgaattgcaatcaccttaaatatgcatcggtagagcgt
atttcttatccaccatttgttgagctttcacaactggatacattgctttttacagctcaa
aaaaaaatccataagagggccctccctcaaaactttctgcatggcctgacaaatctgtca
gtactagatatccgaggtaacgaatttgcatccctgcacccacacaccttcaactatact
cctaatttgaatgagctaattctgtctcaaaatgatatcacagacattccggacaatttg
ttttccccgattcaaaaactaaaaagtctttggatttcacagacaaacctgaggtctcta
gattttctgctccatgctaacctcacagagctggagttcttgcaggtgggaaagaatgtc
ttttctgtgattagagagccagtgatgctgtccctaacagcacttaatatcctggatatg
aagggtaatagcttcacctgtaattgtgacaatgcgtggttcctccaatgggtaatcagc
aacaagcaaacacaagtggttgatgcatacaactttgaatgcaactaccctccaaacctt
aagggaagaaaactgttggagattggcctcagttcttgtacagtagacatgggcttcatc
ttttatatttccacggcatgcacggtcatcatgacaatagcagtctccttcacccaccat
ttcctgcaatggcatctggtctatgcgtactacctcatgctggctatcctctacaactca
aagaacaaggacaaacgtgctcatcaatacgacgccttcgtctcctacaacgcaaacgac
gagggctgggttcttggggagctgctgcccaagctggaggacgagcagggctggagactt
tgtctgcaccaccgagacttccagccaggtaaacccatcatggaaaacataacagatgcc
atctatggcagccggaagactatctgtgtggtcagtcgtgattacctggagagtgaatgg
tgctccagggagatccaggttgccagcttccggctgtttgacgagcagaaggacgtgctg
atcctggtgttcctggaagaaattccaatgcagcagctgtctccatactaccggatgagg
tggctcctcaagaggcaaacgtacctgagctggtcccacgcattagcacacccaaacctg
ttctgggagaagctccggcaggccctggagacccgagagcacccaatgggtgagcatata
cggctcactgtggaggacggaccccctggagagagaccagggccccgtatcccgatagca
tcgttagcctaa
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