Gadus morhua (Atlantic cod): 115533313
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Entry
115533313 CDS
T10832
Symbol
sh3rf3
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF3
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115533313 (sh3rf3)
Protein phosphatases and associated proteins [BR:
gmh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115533313 (sh3rf3)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115533313 (sh3rf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_11
Prok-RING_4
zf-Nse
DUF1272
Motif
Other DBs
NCBI-GeneID:
115533313
NCBI-ProteinID:
XP_030199622
Ensembl:
ENSGMOG00000028170
LinkDB
All DBs
Position
20:complement(12252238..12316282)
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AA seq
847 aa
AA seq
DB search
MITLSAEMDESSSLLDLLECSVCLERLDTTAKVLPCQHTFCRRCLENILSSRNELRCPEC
RILVDCGVDDLPANILLVRLLDGIKQRPLRGNGAGGRQSLPGGSLQLYAAGISASPPGTG
IRELPLATRNSPIKNVPALPCGKALYSYEGKEPGDLQFTKGDIIILRRKVDDNWYHGELN
GCHGFLPASYIQLLRPLSQTPPQGKALYDFEVKDKDQDKDCLAFSKDEVLTVIRRVDENW
AEGMLGDKIGIFPILYVELNETAKQLMEMDKSVVAPVPGPSSAPSPAPAPAPAPLGPCSP
GPSPGPSPSNGNSGCHRRGEGKKNAKKRHSFTALSISQRAAQLNNSRHSMEISHPVLISS
SDPRAAARIHDVSPAGPSPSSAGVLVPPRVASVTSELLAHAKVQLPLNIYLALYAYKPQK
ADELELRKGEMYRVTEKCQDGWFKGTSLRTGASGVFPGNYVTPVSRAPYAAGSARSSCMT
GGGGGGSGQPGSKVSTPSSSPGSPGPSPRPSTPHAGSDAAPASSPQSAAAQLKNCLRSCQ
QSASQARSAMQLVHSPPAGSPERPPGGGVSPLPLRPQSSCSPPCRAQQHGGSPGPRPLSM
QCTTSPGPSPLSSPAARHPLLPLACLTPPNASAALLNGCESAGPSPSSPGGPFPGATITA
KPEKKEKKAGGLLKLLSGAAAKKKSRSTPSSPPTHEPRTPSSSGHAHHLLHLHHHHHQHH
ASSASGHCSLESLGRAGSCPIESETGGAAGLEPLHRKSGSLDTTFPMSPATARSGSALLA
LRPETKPLSRERYRVVVPYPPQSEAEIELREGDVVFVHKRRDDGWYKGTLQRTGRTGLFP
GSFVESF
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgatcactctctccgccgaaatggacgagtcgtcgtcgctgctggatctgctggagtgc
tcggtgtgtctggagcgcttggacaccacggcgaaagtgttgccgtgccagcacaccttc
tgccgccgctgtctggagaacatactcagctccaggaacgagctccgctgcccagaatgt
cgtatcttggtggactgcggggtggacgacctcccggccaacatcctcttggtccggctc
ctggacggcatcaagcagcggccactgcgagggaatggtgcgggcggtaggcagtctctg
cccgggggctcgctgcagttatacgctgccgggatctctgcttcgccccccggcaccgga
atcagagaattgcccttagccacaaggaactcgcccattaagaacgttccggcgctgccc
tgcggcaaggccctctactcctacgagggcaaggagcccggcgacctgcagttcaccaag
ggcgacatcatcatcctgcgacgcaaggtggacgacaactggtaccacggcgagctcaac
ggctgccacggcttcctgccggccagctacatccagctgctgcggccgctcagccagacc
ccgccgcagggcaaggccctgtacgactttgaggtcaaagacaaggaccaggacaaggac
tgtctggcgttcagcaaggatgaggtgttgacggtaatacggcgagtggatgagaactgg
gccgagggcatgttgggggacaagattggcatcttccctattctctatgtggagttgaac
gaaaccgccaagcagctgatggagatggacaagtctgtggtggcccctgtccccgggccg
agctcagccccctccccggctcctgcccccgcccccgccccgttaggcccctgctccccg
ggcccctcccccggcccctccccgtccaatgggaacagtgggtgccacaggcggggcgaa
gggaagaagaacgccaagaagcggcactcgttcacggccctgtccatcagccagcgggcg
gcccagctcaacaacagcagacacagtatggagatctcccacccggtcctcatcagctcc
tcggacccccgggccgctgcacgcatacacgacgtgtcccccgcggggccttcgccctcc
tccgcgggggtgctcgtgccccccagggtggcatcggtgacctcggagctgctggctcac
gccaaggtgcagctgccgctcaacatctacctggccctctatgcctacaagccccagaag
gccgatgagctggagctgaggaagggggagatgtaccgcgtgacggagaagtgccaggac
ggctggttcaagggcacctcgctgcggaccggcgcctcgggtgtcttccccgggaactac
gtcacccccgtctccagggctccgtatgccgccggctccgcccgcagctcctgtatgacc
ggcggcggcggcgggggcagtggccagccgggcagcaaggtctccaccccgtcctcgtcc
ccgggctccccggggccgtcgccccgcccctccacgccgcacgccggctcggacgcggcc
cccgcctcctccccgcagtcggccgctgcgcagctcaagaactgcctgcgctcctgccag
cagagtgccagccaggcccgcagtgccatgcagctggtccacagcccccctgccggcagc
cccgagcggccccccggtgggggggtgtcgcccctgccgctgcggccccagagctcctgc
tcccccccgtgccgggcgcagcagcacggcggctccccggggccccgcccgctctccatg
cagtgcaccacgtccccggggccttcgccgctctcctccccggccgcccgccacccgctg
ctccccctggcctgcctgaccccgcccaacgcctcggcggccctgctgaacggctgcgag
tcggccggcccctcgccctcgtcccccgggggccccttccccggggccaccatcactgcc
aagccagagaagaaggagaagaaggcggggggtctgctgaagctgctgtccggggcggcg
gccaagaagaagtcgcgctccacgccgtcctccccgccgacccacgagccccgcacgccg
tcgtcctcgggccacgcccaccacctgctccacctccaccaccaccaccaccagcaccac
gcctcctccgcctcgggccactgctccctggagtccctgggccgggcgggctcctgcccc
atcgagagcgagacgggcggcgccgcgggcctggagcccctgcacaggaagtcgggctcg
ctggacaccaccttccccatgtcgccggccacggcgcgctccggcagcgcactgctggcc
ctgcggcccgagaccaagcccctgtcccgggagaggtaccgagtggtggtgccctaccct
ccccagagcgaggcggagatcgagctgcgggagggggacgtggtgttcgtccacaagcgg
cgcgacgacggctggtacaagggcaccctgcagcgcacaggccgcaccggcctcttcccc
ggcagcttcgtggagagcttctga
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