Gadus morhua (Atlantic cod): 115533324
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Entry
115533324 CDS
T10832
Name
(RefSeq) syntaxin-1B
KO
K08486
syntaxin 1B/2/3
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115533324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115533324
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmh04147
]
115533324
Membrane trafficking [BR:
gmh04131
]
SNARE
Syntaxin (Qa)
Stx-PM
115533324
Exosome [BR:
gmh04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
115533324
Exosomal proteins of other body fluids (saliva and urine)
115533324
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
Lzipper-MIP1
Dcst2
Relaxase_C
GNVR
Spectrin_Anc-1
VBS_C3G9
Lem25
ARM_ECM29
TolA_bind_tri
CAP_N
MTUS1_CCDC69_CC2
Motif
Other DBs
NCBI-GeneID:
115533324
NCBI-ProteinID:
XP_030199651
Ensembl:
ENSGMOG00000011458
LinkDB
All DBs
Position
2:complement(16696374..>16718980)
Genome browser
AA seq
287 aa
AA seq
DB search
VCVCVFPDQAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAIL
AAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHST
LSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDIK
MDSQMTKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVD
YVERAVSDTKKAVKYQSQARKKKIMIIICCVILGVVLASTIGGTLGF
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtatgtgtatgtgtgtttcctgatcaggccaaggacagcgatgatgacgaagaggtggtt
caggtggacagggaccacttcatggatgagttctttgaacaggtggaggagatcagaggc
tgtatagagaagctgtcggaggatgtagagcaggtgaagaagcagcacagcgccatcctg
gccgcgcccaaccctgacgagaagaccaagcaggagttggaggacctcacagctgacatc
aagaagacagccaacaaagtccgctcaaaattaaaagccatcgagcagagcatcgagcag
gaggagggactgaacagatcatcagcagacctgaggatccgtaagacacagcactcgacg
ctgtcgcgtaagtttgtagaggtgatgactgagtacaacaccacgcagtccaagtaccgt
gaccgttgcaaggaccgcatccagaggcagctggaaatcactgggcgaaccaccaccaat
gaggaactggaggatatgttggagagtggcaagctggccatcttcacggatgatatcaag
atggactcccagatgaccaagcaggctctgaatgagatcgagacccgacacactgagatc
atcaaactggaaaacagcatccgtgagctacatgacatgttcgtggacatggccatgctg
gtcgagagccagggagagatgattgacagaattgagtacaatgtggaacactccgtggac
tacgtagagcgagctgtatctgataccaagaaggcagtcaaataccagagccaagcgcgc
aagaagaagatcatgatcatcatctgctgcgtcatcctgggcgtggtcctggcgtcaacc
attggcggaacgctgggcttctag
DBGET
integrated database retrieval system