KEGG   Gadus morhua (Atlantic cod): 115533324
Entry
115533324         CDS       T10832                                 
Name
(RefSeq) syntaxin-1B
  KO
K08486  syntaxin 1B/2/3
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    115533324
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmh04131]
    115533324
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmh04147]
    115533324
Membrane trafficking [BR:gmh04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    115533324
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   115533324
  Exosomal proteins of other body fluids (saliva and urine)
   115533324
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 AAA_13 Lzipper-MIP1 Dcst2 Relaxase_C GNVR Spectrin_Anc-1 VBS_C3G9 Lem25 ARM_ECM29 TolA_bind_tri CAP_N MTUS1_CCDC69_CC2
Other DBs
NCBI-GeneID: 115533324
NCBI-ProteinID: XP_030199651
Ensembl: ENSGMOG00000011458
LinkDB
Position
2:complement(16696374..>16718980)
AA seq 287 aa
VCVCVFPDQAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAIL
AAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHST
LSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDIK
MDSQMTKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVD
YVERAVSDTKKAVKYQSQARKKKIMIIICCVILGVVLASTIGGTLGF
NT seq 864 nt   +upstreamnt  +downstreamnt
gtatgtgtatgtgtgtttcctgatcaggccaaggacagcgatgatgacgaagaggtggtt
caggtggacagggaccacttcatggatgagttctttgaacaggtggaggagatcagaggc
tgtatagagaagctgtcggaggatgtagagcaggtgaagaagcagcacagcgccatcctg
gccgcgcccaaccctgacgagaagaccaagcaggagttggaggacctcacagctgacatc
aagaagacagccaacaaagtccgctcaaaattaaaagccatcgagcagagcatcgagcag
gaggagggactgaacagatcatcagcagacctgaggatccgtaagacacagcactcgacg
ctgtcgcgtaagtttgtagaggtgatgactgagtacaacaccacgcagtccaagtaccgt
gaccgttgcaaggaccgcatccagaggcagctggaaatcactgggcgaaccaccaccaat
gaggaactggaggatatgttggagagtggcaagctggccatcttcacggatgatatcaag
atggactcccagatgaccaagcaggctctgaatgagatcgagacccgacacactgagatc
atcaaactggaaaacagcatccgtgagctacatgacatgttcgtggacatggccatgctg
gtcgagagccagggagagatgattgacagaattgagtacaatgtggaacactccgtggac
tacgtagagcgagctgtatctgataccaagaaggcagtcaaataccagagccaagcgcgc
aagaagaagatcatgatcatcatctgctgcgtcatcctgggcgtggtcctggcgtcaacc
attggcggaacgctgggcttctag

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