Gadus morhua (Atlantic cod): 115533440
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Entry
115533440 CDS
T10832
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115533440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115533440
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115533440
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115533440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
PRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
FN3_DSCAM-DSCAML_C
TRIM_CC
zf-RING_5
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
115533440
NCBI-ProteinID:
XP_030199837
Ensembl:
ENSGMOG00000001792
LinkDB
All DBs
Position
20:complement(2340880..>2346122)
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AA seq
672 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSQCTPSEPITSISAFQCPTCR
YAITLSQRGLEGLKRNVTLQNIIDRYHKASLSGPNSPSETRRQRTDGSARMSGCGSGGGD
RVTCQFCEQEPAPDAVKTCVTCEVSYCDECLKATHPNKKPFTAHRLIEPLADAHLRGLLC
LEHEGEKINMYCVTDEQLICALCKLVGRHRDHQVAALSDRFDKLKHALDSNLSHLIKRTN
DLETLMGKLIQTCQHVEVNASRQEHKLMEECDLLIDLIQQRRQIIATKIKEGKSVRMRKL
AQQIASCKQCVERSSSLITQADQTLKEADHARFLQTAKNICERVSMATASSQILIPEINL
NDTFDTFALDFTREKKMLESLDYLTAPAPPAIREELCTASYDTITVHWTSDDEFCVVSYE
LQYAIFTSQANVISLCNSADSWMIVPNIKQNHYTVHGLQCGTRYMFIVKAINQAGSRSSA
PGRLKTNSQPFKLDPKSAHRKLKVSHDNLTVEREETSSKKAQSQDRFTSQGNYGVTGNVY
IDSGRHYWEALIGGSSWFAVGVAYKSAPKHEWVGKNSASWVLSRCNSSWVARHNGKDVSV
EPSAHLRRVGVLLDYDSGSLSFYDAVASQHLHTFHVDFVQPVCPVFNLWNRCLTVLSGLP
IPDNLEASDCRE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccctggaatcggagctgacctgcccaatctgtctggagctgttcgaggacccc
ctgctgctgccctgcgcccatagcctgtgcttcaactgcgcccaccgcatcctggtgtcc
cagtgcacgcccagcgagcccatcacctccatcagcgccttccagtgccccacctgccgc
tatgccatcaccctcagccagcgcggcctcgagggactgaagcgcaacgtgaccctgcag
aacatcatcgaccgctaccacaaggcctccctgagcgggcccaactcccccagcgagacg
cgccggcagcgcaccgacggcagcgccaggatgagcggctgcggcagcggcggcggagac
cgcgtgacgtgccagttctgcgagcaggagccggcgccggacgcggtgaagacctgcgtg
acgtgcgaggtgtcgtactgcgacgagtgcctgaaggccacgcaccccaacaagaagccc
ttcacggcgcaccggctcatcgagcccctggccgacgcccacctgcgggggctgctgtgc
ctggagcacgagggcgagaagatcaacatgtactgcgtgacagatgagcagctcatctgc
gccctgtgcaagctggtgggaaggcaccgcgaccaccaggtggcggcactgagcgaccgc
ttcgacaagctcaagcacgccctggactccaacctcagccatctgatcaagaggactaac
gacctggagaccttaatggggaagctgatccagacctgtcagcatgtggaggtgaacgcc
tcgcggcaggagcacaagctgatggaggagtgtgacctcctgatcgacctcatccagcag
agacgacagatcatcgccaccaagataaaggaggggaagtctgtgcgcatgaggaagctg
gcgcagcagatcgccagctgtaagcagtgtgtggagcgctcgtcctccctcatcacgcag
gccgaccagacgctgaaggaggccgaccacgctcgcttcctgcagaccgccaagaacatc
tgcgagagggtgtccatggcaacggcctcctctcagatcctgatccccgagatcaacctg
aatgacacctttgatacgttcgccctggacttcaccagggagaagaagatgctggagagc
ctggattatctcacggcccccgcccccccggccataagggaggagctgtgcacggcgtcc
tacgacaccatcaccgtgcactggacgtccgacgacgagttctgcgtggtgtcgtacgag
ctgcagtacgccatcttcaccagccaggccaacgtcatcagtctgtgtaactcggccgac
agctggatgatcgtgcccaacatcaagcagaaccactacacggtgcacggcctccagtgt
ggaacccgctacatgttcatcgtgaaggccatcaaccaggctgggagccgcagcagtgca
ccgggcaggctgaagactaacagccagccgttcaagctggacccgaagtcggcccaccgc
aagctgaaggtgtcccacgacaacctgacagtggagcgcgaggagacgtcctccaagaag
gcccaaagccaggaccgcttcaccagccagggcaactacggcgtgacgggcaacgtctac
atcgacagtggccgccactactgggaggccctgattggagggagctcgtggtttgcggtg
ggcgtggcctacaagtcggcgcccaaacacgagtgggtggggaagaactcggcctcgtgg
gtgctgtcgcgctgcaacagctcctgggtggcgcggcacaacggcaaggatgtgtcggtg
gagccgtcggcgcacctgcggcgcgtgggcgtgctgctggactacgactcgggctcgctg
tccttctacgacgccgtggcctcgcagcacctgcacaccttccacgtggacttcgtgcag
ccggtctgccccgtgttcaacctgtggaaccgctgcctgaccgtcctgtccggcctgccc
atcccggacaacctggaggccagcgactgccgggaatga
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