Gadus morhua (Atlantic cod): 115533503
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Entry
115533503 CDS
T10832
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115533503
04091 Lectins [BR:
gmh04091
]
115533503
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115533503
Lectins [BR:
gmh04091
]
C-Type lectins
Others
115533503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
GPS
Motif
Other DBs
NCBI-GeneID:
115533503
NCBI-ProteinID:
XP_030199909
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All DBs
Position
20:complement(8178388..8200283)
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AA seq
1356 aa
AA seq
DB search
MVSAMSLSEPDGSALLLGDMPDYLEIVMPRPVGPQQESSFVLDLANQSTVVLSVPATEET
LLIKILPSVDPLPVNVYLGHGVFPTTSNYSLMTKMPHEGTTQEELGGNDGEYFLVLRPVV
GPGIKSIDATVDISVFTSSCKFWNKTKLEWSTRGCRLGAGSTFSQTQCFCNHTTDFASSF
FVMPNTIDMSRVAELFSSFAQNPVVVCFVGSLFLGYLLVVTWARRKDLQDTMKLKVTVLE
DNDPLEDYRYLLSVSTGHRRGASTSSQVTITMEGSDGDSEPHHLSARGKPVFERGGVDLF
LLTTPFSLGHLQSIRLWHDNSGSDPGWYVNKAVVKDLQTERKWYFLCNCWLAEDVGDCIL
DMAFPVATEMDLKGFSNLFYSKTFSGFSDGHLWFSVLSRPASSPFTRVQRVSCCFSLLMC
TMLTSILFYGVPQDPSEQVMDIGTIEFTWQQFMIGMQSSLMVFPVNIVIVSIFRYTRPRE
RKMSLKQPKAKPDARGPKSTLTQDHYTSRPQPAEACDRKLEAAVKDIKKTACSLSKTLKS
SSPVSEKELESAGREDVNAVLSVVEAIVREHLEKGADRNGTKDSQHLEIDPPIQASGSGD
GVPPQTITNESAQIHRAKTLHLHRQIGYMEQRLGQLAPSHYPEQNAHRRALEHIHTIKEL
LRDQMAKVQDGNLDKLTQRPDPLRPEVGEGKGKRSCCGGGRGGGLPWWFVFLGWLLVLAT
SVVAGFFTMLYGLKFGKQLSISWLISMAVSFFESLLVIQPLKVLGLAIFFALVFKKLDEE
DHKNVQFHKPTNSEAQLGQPVCRDSRLYRPPPPVDMEQMRRNRVKEQKAFALIKEILTYV
GFMWMLLLVVYSQRDPNAFYLSKHIRRSFSKDTSSSMNYSKVFSWASGTLLNNLFGRHSG
FITDGNSKLVGSARIRQVRVSQSACHAARPMDRLVRDCHAPYSWDAEAMGSYHPGWRERA
AGDNVTDGQATAWTYQNQEQLRSNTIWGKSAFYRAGGFAADLGPDRINASRVLEYLYSNT
WMDTYTRAVFVEFTVYNANVNLFCIVTLILETAAIGVFEFRSDLQNLRLYQSPGGLQFFI
MTIEVFYFLFIFYYMYLQGKRMKAQRGAYFLCKWNLLELCIILLSWAALSMFIFRTLVGN
RDMDYYHHHKQLFANFRETATADAALGYLIAFVVLLATIKLWHLLRLNPKLHMIAATLHR
AWGDISGFLIVMTIMIVAYSVCGNLLFGWQLSSYMTLWDSVSTLISLQLGIFNYKEVLDH
SPCLGSLFIGTSTVFMTYMVLNLFISVILMAFSYEREHHKPSEEEEIVDLMVLKLFSLLG
IRSSGPPSGAYTGPPSGATTGPPSGANKAPDSQPHK
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggtctccgccatgtccttaagcgagcccgacggctccgccctactgctgggcgacatg
ccagactacctggagattgtcatgccaagaccggtcgggccgcagcaggaaagctcgttc
gttttggacctggctaatcagagcactgtagtcctttccgtccccgcaactgaggaaaca
ctgctgatcaagattttaccctcggtggatccgctgccggtcaatgtatacctgggccac
ggtgtcttccccaccacatcaaactactctctcatgaccaagatgccccacgagggaacc
acacaagaggagctgggggggaacgatggcgagtacttcctggtcctgaggcctgtcgtc
ggcccagggatcaagtccatcgacgccaccgtagacatatctgtcttcaccagcagctgc
aagttctggaacaagacaaagttggaatggagtacccgcggttgccggcttggagccggc
tccacgttctcgcagacgcaatgtttctgcaaccacacgacggacttcgccagctcgttc
ttcgtcatgcccaacaccatcgacatgtcgcgtgtggctgagctcttcagctccttcgcc
cagaaccccgtggtggtctgcttcgtggggtctctgttcctgggctacctgctggtggtc
acctgggcacgccggaaggacctccaggatacgatgaagctgaaggtgacggttctcgag
gacaacgaccccctggaggactaccgctacctcctgagcgtcagcacgggacaccggcga
ggcgcctctacctcctctcaggtgaccataactatggagggctcggacggagacagcgag
ccccaccaccttagcgccagagggaagccggtgtttgaacgcggtggggtggatctgttc
ttgctgaccacacccttctccctgggccacctgcagagtatcaggctgtggcacgacaac
tctggctcggacccgggctggtacgtgaacaaggcggtggtgaaggacctgcagacagaa
cggaagtggtatttcctttgtaactgctggctcgctgaagatgtgggagattgcatccta
gatatggcgttccctgttgccacggagatggacttaaagggattcagtaatctgttctac
agcaagacgttctcaggcttcagcgacggccacctctggttctcggtgttgagccggccc
gccagcagcccgttcacccgcgtgcagagggtctcctgctgcttctccctgctgatgtgc
accatgctcaccagcatcttgttctacggggtaccccaggacccctcggagcaggtcatg
gatataggtaccattgagttcacctggcagcagttcatgattgggatgcagagttccctc
atggtgtttcctgtcaacattgtcatcgtcagcatcttccgctacactcgccccagggag
agaaagatgagcctcaaacagcctaaggccaaacccgacgcccggggccccaagtcaacg
ctgacacaggaccactacacctcacggcctcaaccggctgaagcctgtgatcgcaaattg
gaggctgctgtcaaggacatcaaaaagacagcatgttcgttatccaagaccctgaagagc
agttcccctgtgtcagagaaggagctcgagtcggcagggagagaggatgtcaatgccgta
ctctctgtggtggaggccatcgtccgagagcatttggaaaagggtgcagacaggaatggc
accaaagactctcagcaccttgaaatagatccgcccatacaagcgagcggcagcggcgat
ggcgtaccaccacagaccattaccaacgagagcgcgcagatccaccgggctaagaccctg
cacctgcacagacagataggctacatggagcagaggctggggcagctggccccgtcccac
taccccgagcagaacgcccaccgtcgggccctagagcacatccacaccattaaagaactc
ctacgagaccagatggccaaggtccaggacggaaacctggacaagttgacccagaggccc
gaccccctccgccccgaggtgggggaggggaaggggaagaggagctgctgcggcggtggc
cgaggaggtggtctcccgtggtggtttgtgttcctgggctggctcctggtgctggccacc
agcgtggtggcgggcttcttcaccatgctgtacggcctgaagttcggcaagcagctgtcc
atcagctggctcatctccatggccgtgtccttcttcgagagcctcctcgtcatccagccg
ctcaaggtgctggggcttgccatcttctttgcactcgtatttaagaagttggacgaggaa
gaccacaaaaacgtgcagtttcacaaaccaaccaattcagaagcccagctcgggcagccc
gtctgcagggacagccggctctaccggccccctcccccggtggacatggagcagatgagg
aggaaccgagtcaaggagcagaaggctttcgctctcatcaaggagatcctcacctacgtg
ggcttcatgtggatgttgctgctggtggtgtacagtcagagagaccccaacgcgttctac
ctcagtaagcacatccgcaggagcttcagcaaagacacctctagcagcatgaactacagc
aaggtcttctcctgggccagtggaaccctcctcaacaacctcttcggacgccactctggc
ttcatcaccgacggcaactccaagctggtgggctccgctcggatccggcaggtgcgtgtc
agccagagcgcctgccacgcggcgcggcccatggaccggctggtgagggactgccacgct
ccgtactcctgggacgcggaggccatgggctcctaccaccccggctggagggagagggcg
gcgggggacaacgtgactgacggccaggccactgcctggacataccagaaccaggagcaa
ctccggagcaacactatctggggaaaatctgccttttatcgggcagggggcttcgcggcg
gaccttggaccagaccgaatcaatgccagcagggttcttgagtacctgtacagcaacacc
tggatggacacgtacacaagggcggtgttcgtggagtttaccgtgtacaacgccaatgtg
aacctcttctgcatcgtcactctaatcctggagaccgcagcgataggggtgtttgagttc
cgcagtgatctgcagaacctccgcctgtaccaatcccccgggggccttcagttcttcatc
atgaccattgaagtcttctacttcctgttcatcttctactacatgtacctacagggtaag
aggatgaaggcgcagagaggagcgtacttcctgtgcaagtggaacctgctggagctctgt
atcatcctgctgagctgggccgccctctccatgttcatcttcaggacgctggtggggaac
cgcgacatggactactaccaccaccacaagcagctcttcgccaacttccgcgagacagcc
acggcggacgcagccctgggctacctgatagccttcgtggtgctgctggccaccatcaag
ctgtggcacctgctgcgtctcaaccccaagctgcacatgatcgcggccacgctgcaccgc
gcctggggcgacatctccggcttcctgatcgtcatgaccatcatgatcgtcgcctactcc
gtctgcggcaacctgttgtttggctggcagctttcctcttatatgactctgtgggacagc
gtgtcaaccttgatcagtttgcagctgggcatctttaactacaaagaggtgttggaccac
agtccctgtctgggctctctgttcatcgggacctctaccgtgttcatgacctacatggtc
ctgaacctcttcatctcagtcatcctgatggccttcagctatgagagagagcatcacaag
ccatccgaggaggaggagattgtggacctgatggtgctaaagctattcagtctgctgggt
atcagatcttcaggaccccccagtggggcctacacaggaccacccagtggggccaccaca
ggaccacccagtggggccaacaaagcccccgactctcaaccccacaagtga
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