Gadus morhua (Atlantic cod): 115533630
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Entry
115533630 CDS
T10832
Symbol
impg2
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2 isoform X1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gmh00536
]
115533630 (impg2)
Glycosaminoglycan binding proteins [BR:
gmh00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
115533630 (impg2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
DUF4214
Motif
Other DBs
NCBI-GeneID:
115533630
NCBI-ProteinID:
XP_030200078
Ensembl:
ENSGMOG00000028677
LinkDB
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Position
20:complement(15535576..15557236)
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AA seq
1287 aa
AA seq
DB search
MLDTTRWKYVLCSAIFTFTAVIALDSRTGAAFEGSSMGRPDEGPGRGTSLQTHPRVLRIS
EAKVAPVGRGPAGPRRKRDVLLASGVKLCAQETSEQVVANHLGYFHLRVCQETVWEAFKI
FWGRLPEQEEYQSWMSQCQDAAVSAQDIGRYFSQSREHQALVKSRISSPGLKSSPTAQTW
GEEARVTAQAGPAGTEGPEDRELAPAVPAATGGLVENEEEDEEEEEEEVVEEEEVVEEEA
VFTDASPLNNDITLAPPLMTSVLEQVVELSISLIGHSYSEDLADPGSLQYQTLKTQFTET
MEDALERLPGFHGVSVLNFRPQMDLQGEEALVVDYSVTVLVSGAGVSPEQLDYLTLQSNR
VENSHHLVEERPTLVFTVSKVRIHGGEALHKTDAESEPGSPDPPPTPDHPETTEPTETPN
PPESPETPHSPITPNPPETTDPPETPHPPQTPSPPQNPDPPQTPHPPQTPRPPQTPDPPQ
TPHPPQTPRPPQSPDPTDTPNPPEAPETLESDSFDEHLVDAGTADVPILVEDSAENKTDF
LEEVPEMDAVILEESQKESPDPGNAISPIDDSIAEEGLIPGDLSLMTTPESPPPETLPAE
VASPERAEVITHPESPVESEASGLEPDDPPSSSETFTTTEAVKDSSETTDDGPIGSQEEN
AISENILVEQEILTEVQEGAGQESIAESEGEDKEEAINVEDVPQEIEITTVVTETTQEED
HVVSVVVATPAMTQEEEDLPQQPEDLPAINVNPAPPEEPANGEVEEEGEDVVVTGEETGD
VIEQENEEEPVEVLSEDPVVEERASDGLGIFVSGDLTEDELLLVNQKEPERPVVNPLHPG
PPTALTPERESPFTRISDIVAAVDERSDTGVSVTTMGVQTTVVDLADPTEGDPGYDVIHY
GYGATNQTEEDSSGFPAGAPLGTDQVSIAMPVMPQRALMVFFSLRVTNMIFSEDLFNKSS
AEYKALEQRFLELLVPYLQSNLSNFQNLEILNFRNGSIVVNSRMKFGKPVPQTVTTAVYL
ILEDFCNTAYQTMNLAIDKYSLDVESGDQADPCKFQACNEYAECKVNRWTGEAECVCTAG
YFSVDLLPCQSICELRADFCLNDGKCDIIPGKGAICRCRVGENWWYRGEHCEEYVSEPLV
VGIAIASVAGFLLVASGVIFFLARTLRDQYDKDESEDPIRHAESHPSLERATKYNPMYES
EATTGYSHYYRRYPEAPVYSSASAEASTDFSSEEIRHIYENSELTKEEIQDRIRIVELYA
KDRQFADFVRHHQASVDIRRESSSAQS
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgttggacaccacacggtggaaatatgtcctgtgctccgccatcttcactttcactgct
gtcattgctcttgactcaaggacaggtgcagcgttcgaagggtcctccatgggacgtcct
gacgagggccccggcaggggaacctctctccagacgcaccctcgggtcctccggatatcc
gaggcgaaggtggcccccgtgggccgggggccggccgggcccaggaggaagcgggacgtc
ctgctggccagtggggtcaagctttgtgcccaggagacctccgagcaggtggtggccaac
cacctggggtacttccacctcagagtctgccaggagactgtatgggaggctttcaagatc
ttctggggccgtcttcccgagcaggaagagtatcaaagttggatgagccaatgccaggat
gcagctgtttcggcgcaggatattggccgatatttcagccaatcaagagagcaccaggct
ttggttaagagtcggatttcatcgccgggcttgaaaagctcacccacggcccagacctgg
ggagaggaggcgcgggtcaccgctcaagcaggcccagctggaactgagggtcccgaagac
agagagctggcgcccgctgtcccagcagccaccggggggttggtggagaatgaggaggag
gatgaggaggaggaggaggaggaggtggtggaggaggaggaggtggtggaggaggaggct
gtattcacagatgccagcccgctgaacaatgacatcactctggcgccgcccttgatgacg
tctgtgctggagcaggtggtggagctgagcatctccctgattggtcatagctacagcgag
gacctggcggaccccggcagcctccagtaccagacccttaagacccagttcacggagacg
atggaggacgccctggagcggctgccggggttccacggcgtgtcggtgttgaacttcagg
cctcaaatggatcttcaaggggaggaggcgctggtggtggactactcggtgacggtgctg
gtgagtggggcgggcgtaagccccgagcagctggactacctgaccctgcagtccaaccgg
gtggagaactcccatcacctggtggaggagaggcccacgctggtcttcaccgtcagcaag
gtccggatccacggaggtgaagcgctgcacaagacagacgccgagagtgagcctggatct
ccggaccccccaccgaccccagaccacccagagaccacagaaccgacagagaccccaaac
cccccagaatccccagagaccccacactctcctattaccccaaaccccccagaaaccaca
gacccaccagagacccctcaccccccacaaacccctagtcctccacagaacccagacccc
ccacaaacccctcaccccccacaaacccctagacctccacagaccccagatcctccacaa
acccctcaccccccacaaacccctagacctccacagtctcccgaccccacagatacccct
aaccctccagaggcccctgagaccctcgagtctgactcctttgatgaacatctagttgat
gcagggacagcagatgtccccatcctggtggaggattctgcagagaacaagacagacttc
ctcgaggaagtccccgagatggatgccgtgattctggaggagagtcaaaaagagtctccc
gatcctggaaatgccatctctcccatcgatgatagtatagcggaggaaggcctgatacct
ggagacctttcgctgatgaccactccagagagcccaccgccagagacgctccctgctgag
gtggcgtccccagagcgagcagaggtgatcactcatcccgagtcgccagtggaaagcgaa
gcctctggcctggaacctgacgatcctccatcttcatcggaaacatttacaactacagag
gcggtgaaggactcctctgagacaacagatgacgggccgatcggcagccaagaggagaac
gcaatctctgaaaacattcttgtagagcaagaaatcctgaccgaagtccaggaaggggca
ggacaagagtccattgctgaatctgaaggggaggacaaagaggaagccatcaatgtggag
gacgttccacaggagattgaaatcaccaccgtggtgacggagaccacccaagaggaagat
catgttgtctcagtggtggtggctacaccggcgatgacacaggaagaagaggatcttcca
caacaaccggaggatctcccggccatcaacgtcaacccagcccctcctgaggagcctgca
aacggggaggtagaagaggagggggaggatgttgtggtgacaggggaggaaaccggagat
gttatagagcaggagaacgaagaagagccggtggaggtcttatccgaagacccggtggtg
gaagaaagggcatcggatggcctcggtatcttcgtgtcaggtgacctcacagaggatgag
ctcttattggtcaaccagaaggagccagagcggccagtcgtcaatcctctccaccctggc
cccccgaccgccctgacacctgagagagagtctcctttcactcgcatctctgacatcgta
gcggccgtagacgagcggtctgacacgggagtgtccgtcaccaccatgggtgtgcagacc
accgtggtggacctggctgaccctacggagggggaccctggctatgacgttattcactat
ggttacggggcgaccaatcaaacagaggaggacagcagtgggttcccggccggcgcgcca
ctaggcaccgaccaggtgagcatcgccatgcctgtgatgccccagcgggcgctgatggtg
ttcttcagtctgagggtgaccaacatgatcttctcagaagacctcttcaacaagagctct
gcagagtacaaggccttggagcaacgcttcctggagctgctggtcccctacctgcagtcc
aacctgagtaacttccagaacttggagatcttgaatttccgcaatgggagcattgtggtg
aacagcaggatgaagtttggcaagccagtgccccaaactgtcaccacggcggtgtacctg
atcctggaggacttctgcaacacggcctaccagaccatgaacctggccatcgacaagtac
tcgctggatgtcgaatcgggcgaccaggcggacccctgtaagttccaggcgtgtaatgag
tatgcagagtgtaaggtgaacaggtggacgggcgaagcagagtgcgtgtgcacggctggc
tacttcagtgtggacctgctgccctgccagagcatctgtgagctcagggcggacttctgc
ctcaacgacggcaaatgtgacatcatccctggcaaaggggcaatctgcaggtgtcgcgtc
ggggagaactggtggtaccgcggcgagcattgtgaagagtacgtatcggagccgctggtg
gttggcatagcgatagcctcggtggcgggcttcctgctggtggcctccggggtgatcttc
ttcctggccaggacactgagggatcagtacgacaaggacgagtccgaggaccccatacgg
catgcggagagccacccgtctctggagcgggcgaccaagtacaacccaatgtacgagagc
gaggccaccacgggctacagccactactaccgccgctaccccgaggcgcccgtctacagc
agcgccagcgcagaggcctccaccgacttcagcagcgaggagatccgacacatttacgag
aacagcgaactcaccaaagaggaaatccaagaccgaatacgcatagttgagctgtacgct
aaggacaggcagtttgcagacttcgtccggcatcaccaagcaagcgtggacatccgtaga
gaaagctcctccgcacaatcgtga
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integrated database retrieval system
