Gadus morhua (Atlantic cod): 115533679
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Entry
115533679 CDS
T10832
Symbol
upf3a
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03013
Nucleocytoplasmic transport
gmh03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
115533679 (upf3a)
mRNA cycle factors
P-body specific factors
115533679 (upf3a)
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NCBI-GeneID:
115533679
NCBI-ProteinID:
XP_030200149
Ensembl:
ENSGMOG00000019615
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Position
20:7053339..7058382
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AA seq
466 aa
AA seq
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MRSEKDPMPACREKSVVEIQFRDIQRDQEGNLGLSKQKEEKKEIFTKVVIRRLPPSLSKE
QLEEQLSPLPSFDYFEFFPADQSLHPHLFSRAYINFKTNEDILLFRDRFDGYVFIDNKGQ
EYAAVVEFAPFQKISKKKLKKKDAKAGSIEEDPEYKRFLENYSCDEEKSMANPETLLGEI
EAKTRELIAKRTTPLLEYIKNKKIEKQRIREEKREERRRRELEKKRQREEEKRKRREEER
RKRREADKQKKLSEKEVKIKLLKKSDMDDDVDSDRLKDKGEVAETDRSKWEKPVGQMKSV
EPKERVQPESDKEQRDLLQQQHGRRQRDKEHRAKDEERKRQRHHYDFDKFMRRKDETKWG
KGYCQDRAKKEGHHHGFSYCPDGGDKLGKEDREDPASRKERLRNKVSEKDRPAMQLYQPG
ARNRKRMSSTGKGYDCAPARRSPEPGSEHCYEAVAMGTGTEKSRDE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaaaaggacccaatgccggcatgcagagagaaaagcgtcgttgaaatacag
ttcagagacatacaaagagatcaagagggtaatctgggactttcgaagcagaaggaggag
aagaaggagatatttaccaaggtggtcattcgaaggcttccaccaagcctatcaaaggaa
cagctagaggaacagctcagcccacttccatccttcgattattttgagttcttcccagct
gaccagagcctacaccctcatctattctccagagcatacatcaacttcaaaaccaatgaa
gatatccttctcttccgggaccgctttgatggttatgtttttattgacaacaaaggccag
gagtacgccgccgtggtagagttcgcccccttccaaaaaatctccaaaaagaagctcaag
aagaaagatgccaaagctggtagcattgaagaagacccggaatacaagcgcttcctggag
aactactcctgcgatgaggagaagtccatggctaacccagagactctgcttggggagata
gaagccaagaccagggagctcatagccaaaagaacgacgccactgttggaatacatcaag
aacaagaaaatagagaaacagaggataagagaggagaaacgagaggagaggaggagacga
gagctcgagaagaaacgacagagggaggaggagaagcgcaagagaagagaggaggagcga
cgcaaacgcagggaggcggacaagcagaagaagttgtctgagaaggaagtcaaaataaag
ctcctgaagaaaagtgacatggatgacgatgtggactcggaccgtctgaaggacaaaggc
gaagtcgccgagaccgacaggagcaaatgggagaaaccggttggacagatgaagtcagtg
gagccgaaggaaagggttcagccggagagcgacaaagagcagagagacttactgcagcaa
cagcacggccgcaggcagagagacaaggagcaccgggccaaagacgaggagcgtaagcgc
cagcggcaccactacgactttgacaagttcatgcggcggaaagacgaaaccaagtggggc
aagggctactgccaggaccgggccaagaaggagggccaccaccacggcttctcctattgc
ccagacggaggggacaagctgggcaaggaggacagggaagacccggccagcaggaaggag
cgccttcgtaacaaggtgagcgagaaggaccgaccagccatgcagctctaccagcctggc
gcacgcaaccgcaaacgcatgagttcaacaggcaaaggttacgactgcgcccctgcgaga
cgctcgcccgaaccggggtcggagcactgctatgaggcggtcgccatgggaacggggaca
gagaagagtagggatgagtag
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