Gadus morhua (Atlantic cod): 115534089
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Entry
115534089 CDS
T10832
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115534089 (nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115534089 (nup43)
03036 Chromosome and associated proteins [BR:
gmh03036
]
115534089 (nup43)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115534089 (nup43)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115534089 (nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WDR55
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD_LRWD1
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_Aladin
PSII_BNR
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_CAF1B_HIR1
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
115534089
NCBI-ProteinID:
XP_030200569
Ensembl:
ENSGMOG00000017672
LinkDB
All DBs
Position
21:16514894..16518497
Genome browser
AA seq
370 aa
AA seq
DB search
MEGTNAKYVSQKISKTRWRPVSSSSLQQPDVFATGSWDNEENKISLWSIGEEISGMEAEF
EGDPQLLCECKHGGDVLDLNFLDQERIVTASSTGAVSIYHLHPNSQTLSVSQCWTRAHHY
PCDDAPCTGVVCKSPEIVTVGEDGRINLFRADKQAVIRTIDNADSSTIHAVTFLRTAEIL
TVNSIGQIKTWDFRQQSNTPAQILSQAGDRVPLHCVARHPNQQHIVATGGQDGMLCIWDA
RQGKAPASLMEAHTAEMWEVHFHPTNPDHLFTCSEDGSLLHWEMTSGSETASFLQGGRNN
SVLSRSAVAPAGGGQSLSAWLSGDSSKGRLETTHMLPSQTLSVNSLDVLGQCLVCGTDGE
AIFVNRQVPV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggagggtacaaatgccaaatacgtctcccagaaaataagcaaaacgagatggaggccg
gtatcatcttcgtcgttacaacaaccagatgtctttgcaactggatcgtgggacaacgag
gaaaacaagatttccctctggtccataggagaagagatttctggcatggaagctgagttt
gaaggagatccccagcttttatgtgaatgcaagcatggtggagatgttctggatctaaac
tttctggaccaagaaagaattgtgacggcgtcgtcaacgggggcagtgagcatataccac
cttcacccaaacagccagaccctatcagtttcccagtgttggacgagagcacatcattac
ccttgtgacgatgctccatgcactggggtcgtatgtaaaagccctgagatcgtaactgtc
ggtgaagacggcaggataaacctcttcagggcagacaagcaagcagttatccgtacaata
gacaatgcggacagcagcaccattcatgctgtgactttcctgaggacagcagagattcta
acggtgaactccattggtcaaatcaagacttgggacttcagacaacagagcaacacacca
gcacagatactttcccaggctggggacagagttcccctgcactgcgtggccagacatcca
aaccagcagcacatcgtggccacggggggccaggacggcatgctctgtatctgggacgcc
aggcagggcaaggcccccgcctcgctgatggaggcgcacaccgctgaaatgtgggaagtc
cacttccatcccaccaacccagaccacctgttcacctgctctgaggacggctcgctgctg
cactgggagatgacgtccggctccgagactgcgtccttcctacaaggcggcaggaacaac
agcgtcctctcgcgcagcgctgtggccccagcaggtgggggccagtccctcagcgcctgg
ctcagcggcgactccagtaagggccgcctggagaccacacacatgctgcccagccagacc
ctgtcggtcaacagtctggacgtgctcggacagtgcctcgtctgtggcacagacggagaa
gcaatttttgtgaacagacaggtgcctgtgtag
DBGET
integrated database retrieval system