KEGG   Gadus morhua (Atlantic cod): 115534089
Entry
115534089         CDS       T10832                                 
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115534089 (nup43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmh03019]
    115534089 (nup43)
   03036 Chromosome and associated proteins [BR:gmh03036]
    115534089 (nup43)
Messenger RNA biogenesis [BR:gmh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115534089 (nup43)
Chromosome and associated proteins [BR:gmh03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    115534089 (nup43)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 WDR55 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR36-Utp21_2nd WD_LRWD1 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_Aladin PSII_BNR WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_CAF1B_HIR1 KNTC1_N
Other DBs
NCBI-GeneID: 115534089
NCBI-ProteinID: XP_030200569
Ensembl: ENSGMOG00000017672
LinkDB
Position
21:16514894..16518497
AA seq 370 aa
MEGTNAKYVSQKISKTRWRPVSSSSLQQPDVFATGSWDNEENKISLWSIGEEISGMEAEF
EGDPQLLCECKHGGDVLDLNFLDQERIVTASSTGAVSIYHLHPNSQTLSVSQCWTRAHHY
PCDDAPCTGVVCKSPEIVTVGEDGRINLFRADKQAVIRTIDNADSSTIHAVTFLRTAEIL
TVNSIGQIKTWDFRQQSNTPAQILSQAGDRVPLHCVARHPNQQHIVATGGQDGMLCIWDA
RQGKAPASLMEAHTAEMWEVHFHPTNPDHLFTCSEDGSLLHWEMTSGSETASFLQGGRNN
SVLSRSAVAPAGGGQSLSAWLSGDSSKGRLETTHMLPSQTLSVNSLDVLGQCLVCGTDGE
AIFVNRQVPV
NT seq 1113 nt   +upstreamnt  +downstreamnt
atggagggtacaaatgccaaatacgtctcccagaaaataagcaaaacgagatggaggccg
gtatcatcttcgtcgttacaacaaccagatgtctttgcaactggatcgtgggacaacgag
gaaaacaagatttccctctggtccataggagaagagatttctggcatggaagctgagttt
gaaggagatccccagcttttatgtgaatgcaagcatggtggagatgttctggatctaaac
tttctggaccaagaaagaattgtgacggcgtcgtcaacgggggcagtgagcatataccac
cttcacccaaacagccagaccctatcagtttcccagtgttggacgagagcacatcattac
ccttgtgacgatgctccatgcactggggtcgtatgtaaaagccctgagatcgtaactgtc
ggtgaagacggcaggataaacctcttcagggcagacaagcaagcagttatccgtacaata
gacaatgcggacagcagcaccattcatgctgtgactttcctgaggacagcagagattcta
acggtgaactccattggtcaaatcaagacttgggacttcagacaacagagcaacacacca
gcacagatactttcccaggctggggacagagttcccctgcactgcgtggccagacatcca
aaccagcagcacatcgtggccacggggggccaggacggcatgctctgtatctgggacgcc
aggcagggcaaggcccccgcctcgctgatggaggcgcacaccgctgaaatgtgggaagtc
cacttccatcccaccaacccagaccacctgttcacctgctctgaggacggctcgctgctg
cactgggagatgacgtccggctccgagactgcgtccttcctacaaggcggcaggaacaac
agcgtcctctcgcgcagcgctgtggccccagcaggtgggggccagtccctcagcgcctgg
ctcagcggcgactccagtaagggccgcctggagaccacacacatgctgcccagccagacc
ctgtcggtcaacagtctggacgtgctcggacagtgcctcgtctgtggcacagacggagaa
gcaatttttgtgaacagacaggtgcctgtgtag

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