Gadus morhua (Atlantic cod): 115534116
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Entry
115534116 CDS
T10832
Name
(RefSeq) cysteine protease ATG4D-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04136
Autophagy - other
gmh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115534116
04136 Autophagy - other
115534116
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmh01002
]
115534116
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115534116
03029 Mitochondrial biogenesis [BR:
gmh03029
]
115534116
Peptidases and inhibitors [BR:
gmh01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
115534116
Membrane trafficking [BR:
gmh04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
115534116
Mitochondrial biogenesis [BR:
gmh03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115534116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
115534116
NCBI-ProteinID:
XP_030200634
Ensembl:
ENSGMOG00000035221
LinkDB
All DBs
Position
2:21943069..21949010
Genome browser
AA seq
482 aa
AA seq
DB search
MTGEYTNEAMDRCSSAGVCGGVCEVHGHLSPPPDEETTEDWLLVSSDSLGSRGITMDLEE
EEEEEQRGELEEGRPPKLKSKLVSAWNSLKYGWTLKQKSRFSQSSPVTILGHCFQLNQSG
ARRQFHCSFSSLLWLTYRRGFPPLAGCSLTSDSGWGCVLRTGQMLLAQSLLRHLMPPGWT
WSHGYLGVRDDLDLPSTPEGGGAPWTRRRSLEPQLAVRVEEGHRRVVSWFGDHPAAPFGV
PRLVELGRSSGKRAGDWYGPSIVAHILRKAVTAAADVPNLAVYVAQDCTIYLEDVRRLCR
EPLPRDGSLQGSPGLAWKSLLVLVPVRLGGQDLNPSYISCVKRLLMLECCVGIIGGKPKH
SLFFIGFQGDYLLYLDPHYCQPTVDVRQEHFPLESFHCKYPRKMSFSRMDPSCTFGFYAK
TQKDFGSMCAAVNEALSSCEKYPMFIFSEGPSQETWGPSEPPDPPSRTRTPSSGCVEEFV
LL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaccggagagtacactaacgaagctatggatcgctgctcctctgccggggtctgtggg
ggggtctgtgaggtccacggtcacctcagcccccctccagatgaggagaccaccgaggac
tggctcctggtctcctccgactccctggggtcccggggcatcaccatggacctggaggaa
gaggaggaggaggagcagaggggagagctggaggaaggccggccccccaaactgaagtcc
aagctggtgtctgcctggaacagtctcaaatacggctggactctaaagcagaagtcccgc
tttagtcaaagttccccagtgaccatactgggacactgcttccagctcaaccaatcaggg
gcccggcggcagttccactgcagcttctcttccctgctctggctgacctaccgccgcggg
ttcccgccgctggccggctgctcgctgacctccgacagcggctgggggtgtgtcctccga
accggacagatgctgctggcccagagcctgctgcgtcacctgatgcctccaggctggacc
tggtcacatggctacctgggggtccgtgacgacctggacctcccctccacccctgaaggg
ggaggagctccctggacgaggagacggagcctggagccccagctggcggtgcgggtggag
gagggccaccggcgggtggtttcgtggttcggggaccaccccgcggcgcccttcggggtc
ccccggctggtggagctggggcgcagctcggggaagcgggcgggggactggtacggaccc
tccatcgtggctcacatcctacggaaggctgtgacggcagcagctgatgttccaaacctg
gcggtgtacgtggctcaggactgcaccatctacctggaggacgtgaggcggctgtgccgg
gagcccctccccagagacggctctctgcagggcagcccaggtctggcctggaagtccctg
ctggtcctggtcccggtccgcctgggggggcaggacctcaacccctcctacatctcctgt
gtcaagaggctgttgatgctggaatgctgcgtgggaatcatcggaggcaaaccgaagcat
tctctgttcttcatcggattccagggggactacctgctgtatctggacccccactactgt
cagcccaccgtggacgtgaggcaggagcactttcctctggagtcgttccactgtaagtac
cccaggaagatgtccttcagccgcatggaccccagctgcaccttcggtttctacgccaag
acgcagaaggactttggctccatgtgcgccgccgtcaatgaggctctgtcttcttgtgag
aagtaccccatgttcatcttctctgagggccccagtcaggagacgtggggcccctcggaa
cccccagaccccccctcccggaccaggacgcccagcagcggctgcgtggaggagtttgtg
ctcctctga
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