Gadus morhua (Atlantic cod): 115534466
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Entry
115534466 CDS
T10832
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03410
Base excision repair
gmh04210
Apoptosis
gmh04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115534466 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115534466 (parp1)
04217 Necroptosis
115534466 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmh03032
]
115534466 (parp1)
03036 Chromosome and associated proteins [BR:
gmh03036
]
115534466 (parp1)
03400 DNA repair and recombination proteins [BR:
gmh03400
]
115534466 (parp1)
Enzymes [BR:
gmh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
115534466 (parp1)
DNA replication proteins [BR:
gmh03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115534466 (parp1)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
115534466 (parp1)
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
115534466 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
115534466
NCBI-ProteinID:
XP_030201320
Ensembl:
ENSGMOG00000014929
UniProt:
A0A8C5A8C6
LinkDB
All DBs
Position
21:13842746..13855727
Genome browser
AA seq
1013 aa
AA seq
DB search
MGDSNEDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWQ
RAAAQSTADIAGFSDLRWEDQEKVKKAIETGGVTGGKADQKGGAKGEKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKSVDAEKPQLGLIDRWYHTACFVSRREELVFKSEYSGAQ
LKGFNGLRAEDKEDLKKRLPAVKSEGKRNGDELDGVSKKVKKEKEDEDKKLEDQLKVQSQ
LIWGIKDKLKKNCSSNDMKELLIANSQEVPSGESNLVDCLADGMAFGSLQPCAECKGQLV
FKGNAYYCSGDISAWTKCVFTTKSPVRTDWVIPKEFHEVPFLKKFKCKKQDRIFPKVEPN
ATLVVATAASSGSTKPFPEGAPAGKPLTGMKLLAVGKLKKNKDEIKAVVEEMGGKITPSA
NKADLCLSNAKELEKMTKKMEEVKEAGVRVVAEEFLTDVKASGKSLQELVSVHAISPWGA
EVKVEVKVEPKAAAVPSKSGAMAAKSTGRVKEEEGGSKSKKMKLTVKGGAAVDPDSGLEN
SAHVLEQSGKMYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGHKL
DKFSDKLAAMDNFLGVYTDKTGNTWNCTNFTKYPNKFYPLEIDYGQDEEAVKRLTESAGT
KSELAKPVQELIRMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLSEVQQAVT
DSSAESQILDLSNRFYTLIPHDFGMKKPPLLSNLDYVQSKVQMLDNLLDIEVAYSLLRGG
AEDNGKDPIDINYEKLKTKIEVVDKNSEEAEIIMQYVKNTHAATHNTYTLEVDEIFKIVR
EGEYQRFRPFKDLHNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADMV
SKSANYCHVSQLDPVGLLLLGEVALGNVHELKKAAHITKLPKGKHSVKGVGRTAPDPGST
ATLDGVQVPLGKGCNTNIDDTSLLYNEYIVYDVAQVNLKYLLKTKFNYQTSLW
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgggagactcaaacgaagacaagctttacaaagccgaatatgctaaaagtggccgtgct
tcgtgcaagaaatgcaaggagaacattgctaaagattcgctccgaatggccatcatggtg
cagtcgcccatgtttgacgggaaggtcccccactggcaccacttctcctgcttctggcag
cgggcagcggcccagtccaccgcggacatcgctggcttctcggacctccgctgggaggac
caggagaaagtcaaaaaggccatcgagaccggaggagtgaccggaggcaaagcagaccaa
aaaggcggagccaaaggagagaagacgctcaatgactttgctgtggaatatgccaagtct
aaccgcagcacctgcaaaggctgcgagcagaaaatagaaaaggatcagatccgcgtgtcc
aagaagtcagtggatgcggagaagccccagctgggtctgatcgaccgctggtaccacaca
gcctgcttcgtcagccgccgcgaggagctggtgttcaagtccgagtacagcggcgcccag
ctcaagggcttcaacggactgcgggctgaggacaaggaggacctgaagaagaggctgccc
gcggtgaagtctgaaggaaagagaaacggtgacgagttggacggggtgtcaaagaaagtg
aagaaggagaaagaagacgaagataaaaagcttgaggaccaactaaaggtgcagagtcag
ctgatatggggcatcaaggacaagctgaagaagaactgctcctccaacgacatgaaggag
ctgctgattgcaaactcccaggaggtgccatctggagagtccaacctggtggactgcctg
gcggacggcatggcgttcggctccctccagccctgtgcggagtgcaaggggcagctggtg
ttcaagggcaacgcctactactgcagcggggacatctctgcctggaccaagtgtgtgttc
accaccaagtcgcccgtccgcacagactgggtcattccaaaggaattccacgaggttccc
ttcctcaagaagttcaagtgtaagaaacaggaccggatcttccccaaggttgagcccaac
gccaccctggtcgtcgccaccgctgcctccagtgggtcgactaaacctttcccagaaggg
gccccagctggcaagcctctgacgggcatgaagctgcttgctgtgggtaaactgaagaag
aacaaggatgagatcaaggctgtcgtggaggagatgggcgggaagataaccccctcagcc
aataaggcggacctctgcctcagcaacgcaaaggagctggagaagatgaccaagaagatg
gaggaggtgaaggaggccggggtgcgagtggtcgccgaggagttcctcacggacgtcaag
gcgtcgggcaagtctctccaggagctggtctccgtgcacgccatctctccctggggggcg
gaggtcaaggtggaggtcaaagtggagcccaaggctgctgccgtgccctcaaagtccggg
gccatggccgccaagagcaccggccgcgtgaaggaggaggaagggggcagcaagtctaag
aagatgaagctaactgtgaaaggaggagctgccgtggaccctgattcgggcctggagaac
agcgcccatgtcctggagcagagtgggaagatgtacagcgccaccctgggtctggtggac
atcgtccgcggaaccaactcctactacaagctgcagctcctggaggacgacgtccagaag
cggtactgggtgttcaggtcctggggccgcgtgggcaccaccatcgggggccacaagctg
gacaagtttagtgacaagctcgcagccatggacaacttcctgggcgtctacacggataag
actggcaacacctggaactgcaccaacttcaccaagtatcccaataagttctacccgctg
gagatcgactacggacaggacgaggaggctgtgaagaggctcacggagagtgctggcacc
aagtctgagctggccaagcccgtccaggagctcatcaggatgatctttgacgtggagagc
atgaagaaggccatggtggagtttgagattgacctccagaagatgcccctgggaaagctg
agtaagaggcagatccagagcgcctacgccctcctcagtgaggtgcagcaggctgtgaca
gacagttcggccgagtcccagatcctagacctgtccaaccgcttctacacgctcatcccc
cacgacttcggcatgaagaaaccccctctgctgagcaacctggactacgttcagtccaag
gtccagatgttggacaacctgttggacattgaggtggcctacagcctgctgagaggaggg
gcagaggacaacgggaaggatcccatcgatatcaactatgagaaactcaaaaccaagatt
gaagtggttgacaagaacagcgaggaggccgagatcattatgcaatatgtcaagaacaca
cacgctgctacacacaacacctacacactggaagtagacgagatcttcaaaatagttcgc
gagggcgagtaccaaaggttccggcccttcaaggacctgcacaaccggcagctgctgtgg
cacggctcgcgcaccaccaactacgccggcatcctgtctcagggtctgcgcatcgccccc
ccagaggcccctgtgactggttacatgttcggcaagggtgtgtactttgccgacatggtg
tccaagagtgcaaactactgccacgtgtcacagttggatcccgtaggccttttacttctg
ggagaggtcgcccttggcaacgtgcatgaactgaagaaggctgcgcacattaccaaacta
cctaagggaaaacacagtgttaaaggtgtgggcagaaccgcccctgatcccggttccact
gccactctagatggggtgcaggtgccgctaggaaagggctgcaataccaacatcgacgac
accagtcttctctacaacgagtacatcgtttacgacgttgcacaggtaaacctgaagtac
ctgctgaagaccaagttcaactaccagacgtctctttggtga
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