Gadus morhua (Atlantic cod): 115534500
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Entry
115534500 CDS
T10832
Symbol
gtf2f1
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115534500 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmh03021
]
115534500 (gtf2f1)
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
115534500 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
115534500
NCBI-ProteinID:
XP_030201376
LinkDB
All DBs
Position
2:complement(19557899..19568113)
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AA seq
543 aa
AA seq
DB search
MTALGGGSSTATEYTVRVPKNTSKKYSIMAFNAGDKVNCSTWTQARMERDLSARRMYGEE
EAPDGAAGSEFGKKQREEARRKKYGIVTREFKVEDQPWILKVNGKAGKRFKGQKKGGVTE
NASYYIFTQCPDGAFEAFPVHGLYNFVPQXKHRTLTAEEAEEEWAGGTRWVNHFSIMLQR
RLRETETRKEKGDDDDDEGGEGREGGKKKKKKKGGGDLRITDWQEDLEMSTDDSDSSMGE
EGEGKAKKDKEAKGKQGKKKKKKKKGSDNEAAEDSDDGDYEGLEVDYMSDESSSEEEPET
KSNQNKGEGVPKGIDEATESEEESEEEKPNEEETKEGEEEEEEGKKTPVQTEKKKKKDSS
GESDSSDDSDIEGEAASALFMAKKRTPPKRGGGRGSGGSSRASSRPGTPSIDTAATSNTL
RAAASKLEQGKRPPAAPSTDSPAAKRLKMEPAGQSPAPSGKTTPQPPSGKSTPSTSDVQL
TEEAVRRYLIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFY
LTE
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgacggccctgggaggcggaagctcaacggctacagagtacacagtcagagtccccaag
aacaccagtaagaagtacagcatcatggcgttcaacgccggggacaaagtgaactgctcc
acgtggactcaggcccgcatggagcgcgacctgagcgcccgccgcatgtacggcgaggag
gaggccccggacggcgccgcagggagtgagttcggcaagaagcagcgcgaggaggcgcgc
aggaagaagtacggcatcgtgacgcgggagttcaaggtggaggatcagccctggatcctg
aaggtcaacggcaaggccggcaagaggttcaaaggtcagaagaagggcggcgtgacggag
aatgcctcgtactacatcttcacccagtgccccgacggggccttcgaagccttccccgtc
cacggcttgtacaacttcgtcccccagntcaagcaccgcacgctgaccgctgaggaggcc
gaggaggagtgggccggaggaacaaggtgggtgaaccacttcagcatcatgctgcaacgc
cggctgagggagacggaaacgcggaaggagaagggggacgacgacgacgacgagggggga
gaagggcgggaaggaggcaagaagaagaagaagaagaaaggaggaggggacctgcgcatc
acagactggcaggaggacctggagatgagcacagacgacagcgacagcagcatgggcgaa
gagggagaggggaaggctaagaaggacaaggaggccaaaggaaaacaagggaagaagaag
aagaagaagaagaagggcagcgacaatgaggcggccgaggacagcgatgacggagactac
gaagggctggaggtcgactacatgtctgatgagagcagctctgaggaggagccggagacc
aagagcaaccagaacaaaggagagggcgtccccaaaggcatcgacgaggccacggagagc
gaggaggagagtgaggaggagaaacccaacgaggaggagacgaaggagggagaggaggag
gaggaggagggtaaaaagacgccggtgcagacagagaagaagaagaagaaagacagcagc
ggggagtcggacagctctgacgacagcgacatcgagggcgaggcggcatctgctctgttc
atggcgaagaaacgcacccctcccaagcgggggggcgggcgtgggtcggggggcagctcg
cgggcctccagccggcccgggaccccctccatcgacactgccgcaacctccaacacgctg
agggccgctgccagcaagctggagcagggtaagaggccccccgcggccccctccaccgac
tccccggctgccaagaggctgaagatggagccggccggccagagccccgccccatccggg
aagaccacccctcagcccccctccgggaagtccacccccagcaccagtgacgtccagctg
acagaggaggcggtgcgccgctacctgatccgtaagcccatgaccaccaaggacctgctg
aagaagttccagaccaagcggacggggttgagcagcgagcagacggtcaacgtgctcgcc
cagatcctcaagcggctcaaccccgagcgcaagaacgtcaacgacaagatgcacttctac
ctcaccgagtga
DBGET
integrated database retrieval system
