Gadus morhua (Atlantic cod): 115534595
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Entry
115534595 CDS
T10832
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
Enzymes [BR:
gmh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115534595 (ddx1)
Spliceosome [BR:
gmh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115534595 (ddx1)
Transfer RNA biogenesis [BR:
gmh03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
115534595 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115534595
NCBI-ProteinID:
XP_030201543
Ensembl:
ENSGMOG00000011300
UniProt:
A0A8C5BA73
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Position
21:complement(8227350..8235862)
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AA seq
743 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEELGWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQVVYETLKDEQEGKGGKGKSSVKSGGAIFNKWQMNPYDRSPAFAIGADGMCCQSREFKE
WHGCRSTKGVTKGKYYYEVSCHDQGLCRIGWSSSLAALDLGTDKFSFGFGGTGKKSHNKQ
FDSYGEEFTMHDTIGCYLDLDKGHISFAKNGTDLGLAFEIPPHIKNQPLFASCVLKNAEL
KFNFGDEDFKNPPKSGFMALCQAPDGHSVKSSQAGSAKVSQVKVVSNAPKALIIEPSKEL
AEQTLNVVKQFKKYVENPKVRDLLIIGGVAAKEQLAVLEQGVDIVVGTPGRLDDLISTGK
LSMSQIRFLVLDECDGLLSAGYTDFITRLYNQIPQVTSDGKRLQVIVCSATLHSFDVKKL
SERIMHFPTWVDLKGEDSVPETVHHVVVPVAPKKDRLWERLGKNHIQTDEVHAKDNTRPG
TNTAEAWSEAVKLLKGEYTIRAITEHKMDQAIIFCRTKIDCDNMEQYFTQQGGGPEKTKE
HLLSCVCLHGDRKPQERKNNLERFKRKEVRHLICTDVAARGIDIHGVPYVINVTLPDEKQ
NYVHRIGRVGRAERMGLAISLVAVEKEKVWYHVCANRGRGCYNTRLKEEGGCTIWYNEME
LLSDIEEHLKCTITQCEADIKVPLDDFDGKVTYGKRKAMGGSNYKGHVEALAPTVQELAN
LEREAQTSFLHLGYMPNQLFRAF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcagcattctctgaaatgggtgttatgcctgaaattgcgcaggcagtggaggagttg
ggctggctactgccaactgacatccaggcagagtcgatcccactcatcctcggcggcggt
gatgtcctcatggcagcagaaactggaagcggcaaaacgggggccttcagtattcctgtg
attcaggttgtgtacgaaactcttaaggacgaacaagagggcaagggtgggaaaggaaaa
tcatctgtgaagtcaggaggagcaatctttaacaaatggcagatgaatccatatgaccgc
agtccagcttttgctatcggcgctgacggaatgtgctgccagagcagggagtttaaagag
tggcacggctgccgttccactaaaggggtcacaaaagggaagtactactacgaagtgtcc
tgccatgatcagggtctctgtcgcatcggatggtcttccagcctggctgccctggaccta
ggaactgataagttcagctttggttttggcggaacgggaaagaagtcccacaacaaacaa
tttgacagttatggcgaggagttcaccatgcatgatactattggatgttacctggatctc
gacaagggccacatctctttcgccaaaaacggtacggacctcggcttggcttttgagatc
ccaccccacatcaagaatcagccactctttgcttcttgtgtcctcaagaatgcagagttg
aagttcaactttggcgatgaggactttaagaaccctcccaagagtggtttcatggccctg
tgccaagccccagacgggcacagtgtcaagtcatcgcaggcaggcagtgccaaggtgagc
caagtgaaagtggtctccaatgcgcctaaagccctgattatcgagccgtccaaggagctg
gcagagcagaccctcaacgtggtcaaacagttcaagaaatacgtggagaaccccaaagtc
agggatctactgataattggaggcgtggctgccaaagaacagctggcggttctggaacaa
ggggttgatattgtcgtcggaacccctgggagactagatgacctcatatcaaccggcaaa
ctcagcatgtctcagatccgcttcctggtcctggacgagtgtgacggtctcctgtctgca
gggtataccgacttcatcaccaggctgtataaccagatcccgcaggtcacctcagacggg
aaacgactgcaggtgatcgtgtgctcggccacgctgcactccttcgacgtgaagaagctg
tcggagcgcatcatgcacttccccacctgggtggacctgaagggcgaggactctgtcccc
gagacggtgcaccacgtggtggtccccgtggcgcccaagaaggaccggctctgggagcgc
ctgggcaagaaccacatccagaccgacgaggtccatgccaaagacaacacaagaccagga
accaacactgcagaggcgtggtcggaggctgtcaagctgttgaagggcgagtacaccatc
agggccatcaccgagcacaagatggaccaggccatcatcttctgccgcaccaagatcgac
tgcgacaacatggagcagtacttcacccagcagggaggcggtccggaaaagaccaaggaa
cacctgttgtcttgtgtctgtctccatggtgatagaaaaccccaagaacggaagaacaac
ttggagcggttcaagaggaaggaggtgaggcacttgatctgcacggacgttgccgcccga
ggaatcgacatccacggagtcccttacgtgatcaacgtgaccctacccgatgaaaagcag
aactatgtccatcgtattggcagggttggaagagcagagagaatgggactggccatctct
ttggttgcagtggaaaaggagaaggtgtggtaccatgtgtgtgccaaccgcggcaggggc
tgctacaacacgcggctgaaggaggaaggaggctgcaccatctggtacaacgagatggag
ctcctgtctgacatcgaggagcatctgaagtgcaccatcacgcagtgcgaggcggacatc
aaagtgcccctggacgactttgatggaaaggttacctacggcaagcgcaaggccatggga
gggagtaactacaagggtcacgtggaagccctggccccgacggtacaggagctggcaaac
ctggagagagaggcccagacttccttcctgcatcttgggtacatgcccaaccaactcttc
agagcattctag
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