Gadus morhua (Atlantic cod): 115534674
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Entry
115534674 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: afadin-like
KO
K05702
afadin
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04517
IgSF CAM signaling
gmh04520
Adherens junction
gmh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115534674
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115534674
04530 Tight junction
115534674
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
RASSF8-10_RA
Yop-YscD_cpl
NAC
Motif
Other DBs
NCBI-GeneID:
115534674
NCBI-ProteinID:
XP_030201687
Ensembl:
ENSGMOG00000002610
LinkDB
All DBs
Position
21:complement(22029941..22155921)
Genome browser
AA seq
1989 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRMAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPRYSLYEVHVSGEERKLDLDEKPLVVQLNWNKD
DREGRFVLKNENDILPKKIQSNGPEKEKDGVIQNFKRTLSKKEKKKEKKRDKEFARIPDG
DEEAFSREDGDSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRGSDGRP
DSGGTLRIYADSLKPNIPYKTILLSTTDMADFAVVEALEKYGLEKENPREYCLARQDDKL
GKDTILDETEYPLQIFRDWPADRGALVFQLKKRPPDYQGRKGRKVEDKIQRGRDGSLHGS
LPPEKLPYLVELSPGRGNHYAYYAYRHHEDGSDSRDKPKLYRLQQSITEVGSDCTDDGAI
QLFGPGLLPHHCNLMHSEGLVTVTPHGPDADTLVDGQRVNETTVLHSGSTLQFGAAHVFK
FVDPAYDQGSKRDPAGMIRGRHKSGSVPETTFDLHGDVHSGAALSTSKSSGRLEMERTNC
SERGMVKPTIREQQDSRSQDSLTPEVMLPASIEFRDNSEDAFLSAIINYTNSSTVHFKLS
PTYVLYMACRYVLAPHYRPDLSPSERSHKVIAIVNKMVSMMEGVIQKQKNIAGALAFWMA
NASELLNFAKQDKDLSRITLDGQDILAHLVQMAFKYLVHCLQADLNNYMPAFLDDPEEHN
PQRPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVTEADSGLCSH
YWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDVQNIHNTCFKL
NSLQLNALMTNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREVQLEEDPDLQLPF
LLPEDGYSCDVVRNVPNGFQEFLEPLVQRGFCRLTAHPRSPGTWTIHFEGADSDSHFVAP
DTSDMSMKKEPEVVTVTLKKHNGMGLSIVAAKVQAKRKLGIYIKSVVKGGAADMDGRLAA
GDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMLPRAS
DRGRDKNGKMRPRARALSCTTRAAQNGSPESPQAGWEAYXEPKKMSGEERLLKNRADHRS
SPNVANQGQSPRSKGDYPGGPGTRITSVSTGNLCAADEEHSTPDPEEYPIPTQTYPREYF
TIPASKSQDRVVVVPGHGQNQPPPTQHWQPMDDRERLPGVLSEGLQNSMQRVDKMGQSQE
ELYPAPGGLRQEDLLHLQQQQQQLHQREEQHYRENEYQREADYAHRDMDYQRGLPGAVDH
WGNHQQVSSSVESSTSSQEHLNFSNASSSSNSKTHPNHKSGPGRWKTPNAPQHPPSRSDL
PPPPPPPPPTHLPHDPYEPPMDLPLPPPPVLNAAAAQQAADRKKREEQQRWYEKEKARLE
EERERKRREQEKKLGQIRSNPVMAAPPPHHQPSLAQPYPPPQHQPPVPSRPEKLASVPGP
VGPAPGQAAGPHPGPQPGPQPGPHPGSQPGPHPGPNPAMDTVIRELLPQQQPRTIERRDL
QYITISKEELSSSDSLSPDPWKRDAREKAEKQQQLHIVDLLDKEIQELQAKPERTAEESD
RLRKLMLEWQFQKRLQESKQSDEDEEEEDDEDVDTAMIMQRLEAEKRARQQTAVPAISVL
DLLQDEERRRKQQLEEIRKREVEERAKQEEERSWREVEERAKQEEERSWREEERARREAD
QKRRQEEEYYNRLEAGRRRQHDEAERKLLTPEEPGGLYRPPLPRDYQPPEPPTNTPPPPP
QRNTSYLKTQVVSPDALYTATFVSYAGDEEDDEEGEEASRASALSGQPKLSATRKSYGDL
PVSGHGKPRPPPTARKPRPLSDGIFLSSSFQLPVNNSNSTGHAPPPPTKPSFLKGFDSYT
GNPAGLVGTGEVFKDKWTKGQEQENAAPGAPESMTFKERQRLFSQGKEVSNKVKASRKLM
ELENELNTK
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagcagggaggaggagaggcggaaactggccgacatcatcaaccactggaac
gccaaccggctcgacctgttcgagatcagccagccgaccgaggacttggagttccacggt
gtgatgcgcttctacttccaggaccgcatggcagggaactttgcgaccaagtgcatccgt
gtgtcgagcacggccaccacacaggacgtcatcgagacgctggctgagaagttccgacct
gacatgaggatgctttcctcgcctagatactccctgtatgaggtccacgtcagtggggaa
gaacgcaagctggacctggatgagaagcctctggtggtgcagctcaactggaacaaagat
gaccgggagggacgcttcgtgctcaagaacgaaaacgacattctgcccaagaagattcag
agcaacggtcctgagaaagagaaggacggagttattcagaacttcaagcgcaccctgtcc
aagaaggagaagaagaaggagaagaagagggacaaagagtttgcacgtatccctgatgga
gacgaggaggcattctcaagagaggacggggacagccggctcgcggccgaagtgtacaag
gacatgccagagaccagcttcacacggaccatctccaacccggaggttgtgatgaagagg
aggcggcagcagaagctggagaaaaggatgcaggagttcaggggcagtgacggaaggccg
gactctgggggtactttgagaatctacgctgacagcctgaagcccaacataccctacaag
accatcctactgtccaccaccgacatggccgactttgccgttgttgaggccctggaaaag
tatggcttagagaaggagaacccgcgggagtactgccttgccaggcaagatgataagtta
ggcaaggacacgatactggatgagacggaatatccacttcagatattcagagactggccc
gcagatagaggagcgttggtgtttcagctgaagaagaggccacctgactaccagggaagg
aaggggaggaaggtggaggacaagattcagcggggcagagacggctctctgcatggctcc
cttcccccagagaaactcccttacctggtggaactgagcccagggagagggaatcactat
gcctactacgcatatcggcaccacgaagatggctcagactcccgggacaaaccaaagctc
taccgcctgcagcaaagcatcacagaggtgggctcggactgcaccgatgatggagccatc
cagttgtttggtccgggcctcctccctcatcactgcaacctgatgcacagcgaggggctg
gtgacggtcaccccccacgggcctgacgcagacaccttggtggacgggcagcgtgtcaac
gagaccaccgtgctgcactccggatccaccctccagtttggtgccgcccacgtcttcaag
tttgtagaccccgcgtacgatcagggcagcaaacgagacccagccggaatgatcagaggc
cgacacaagtctgggagtgtaccagaaactacgttcgatctccacggcgatgtccacagt
ggtgctgctttgtctaccagcaagagctccggtaggctggagatggagaggacaaactgc
agcgagcggggcatggtgaagcccacgataagggaacagcaggacagcagatcccaggac
agcctaaccccggaggtaatgctgccagccagcattgagttcagggacaactctgaagat
gctttcctgtctgccatcatcaactacaccaacagctccacggtacacttcaagctctcc
cccacatacgtcctgtacatggcctgccgctacgtcctggcccctcactaccggcccgac
ttgtccccttcagagaggtcccataaggtcatagccatcgttaacaagatggtgagcatg
atggaaggtgtcattcagaagcagaagaacatcgcgggggccctggcgttctggatggcc
aatgcctcggagctcctgaatttcgccaagcaggacaaggatctgagccggatcacgctg
gacggccaggacatcctggcccacttggtgcaaatggccttcaagtatttggtgcattgc
ctccaggctgacctgaacaactacatgccagcctttctagatgacccagaggaacacaac
ccacagagacccaagatagaggacgtgctgcacacactgacgggggccatgtcgcttctg
cggcgttgccgtgtcaacgcagccctcaccatccagctgttctcccagctcttccacttc
atcaacatgtggctgttcaacaagctggtgacggaggcggactccgggctgtgctcccac
tactggggagccattctgcggcagcagctcagccacatcgaggcctgggccgagaagcag
ggcctggagctggctgccgactgccacctgagccgcatagtgcaggcgaccaccctgctg
accatggacaagtattccatgcaggacgttcagaacatccacaacacctgcttcaaactg
aactccctgcagctcaacgccctcatgaccaactaccactgtgcccctgatgagccttat
ataccacctgagcttattgaccatgtggtggcggtggcggagaacacggccgacgagttg
gcgcgtagcgacggccgagaggtccagctggaggaggaccccgacctgcagctgcccttc
ctgctgccagaggacggctactcctgtgacgtggtgcgcaacgtgcccaacggcttccag
gagttcttggagcccttggtgcagagagggttctgtcggctgaccgcccatcctcgctcc
ccgggcacctggaccattcacttcgaaggagccgactcagacagtcactttgtggcgcca
gacacctccgacatgtcgatgaagaaggagccagaggtcgtcacggtgaccctgaagaag
cacaacggcatgggcctgagcatcgtcgcagccaaggtacaggccaagagaaaactgggg
atctacatcaagtctgttgtcaagggaggcgctgctgacatggatggccggctggcagca
ggggaccagctgctgagtgtagatgggcggagtctggtgggcctatcccaggagagagct
gccgagctgatgacacgaacgggctctgtggtgaccctggaggtggccaagcagggcgcc
atctaccacggcctggctactctgctcaaccagcccagccccatgctgcccagagcgtct
gaccgcggacgcgataagaatggcaagatgcgccccagagcgagggctttgagctgtaca
acacgggccgctcagaacggctcgccagagagcccgcaggccggctgggaggcgtacnca
gaacccaagaagatgagcggggaggagcggctgctcaagaaccgcgccgaccaccgctcc
agccccaatgtggctaatcaaggtcagagtccgagaagcaagggcgactaccctggtggg
ccagggacaagaatcacgtccgtctccaccggcaacctatgcgccgctgacgaggagcac
tctacccctgatccggaagagtaccccatcccaacgcagacgtaccccagggagtacttc
accatcccagcctccaagagccaggaccgggtggtggtggtccctgggcatggccagaac
cagcccccccccacccagcactggcagcccatggacgacagggagcgcttgccaggagtt
ctttccgaaggacttcagaacagcatgcagcgtgtggataagatgggccagtcccaggag
gagctgtaccctgctccggggggcttgaggcaggaggacctgctgcacctccagcagcag
cagcagcagcttcaccagcgggaggagcagcactaccgggagaatgagtaccagcgtgag
gcggactacgcccaccgtgacatggactatcagagaggactcccaggcgccgtggaccac
tggggtaaccaccaacaggtctcctcctcggtggagtcctccacctccagccaggagcac
ctcaacttctccaacgcctcctcctcctccaacagcaagacccaccctaaccacaagagt
ggccctgggcgctggaagacgcccaacgcaccacaacaccccccgtcacgctctgacctc
ccccctccacccccgccgcctccccccacccacctcccccacgacccctatgagcccccg
atggacctgcccctgcccccgccccctgtgctcaacgccgccgcggcgcagcaggcggcc
gaccgcaagaaacgggaggagcagcagcgctggtatgagaaggagaaggctcgcctggag
gaggagagggagaggaagcgaagggagcaggagaagaagctggggcagattcgttcaaac
cctgtcatggccgccccccctccgcaccaccagccgtccctagcccaaccgtacccccct
ccccagcatcagccaccggtcccatcccggcccgagaagctggccagtgtccctggccct
gtggggcccgccccagggcaggccgctggacctcaccctggacctcagcctggacctcag
cctggacctcaccctggatctcagcctggacctcaccctggacctaaccctgccatggac
acggtgatcagggagctgttaccacagcagcagccacgcaccatcgagcggcgggacctg
cagtacatcaccatcagcaaggaggagctgtcctccagtgacagcttgtccccggaccct
tggaagagggatgcccgcgaaaaggctgagaagcagcagcaactgcacatcgtggacctg
ctggacaaggagatccaggagctacaggccaagccggagcgcaccgcagaggagagcgac
cgcctccgcaagctcatgctggagtggcagttccagaaaaggctgcaggagtccaagcaa
agcgacgaagatgaggaggaagaggacgacgaggacgtggacacggccatgatcatgcag
aggctggaggctgagaagagggcccggcagcagacagctgtccctgctatctctgttcta
gacttgctgcaggacgaggagcgtcggcgcaagcagcagctggaggagatccgcaagcgg
gaggtggaggagcgggccaagcaggaggaggagaggagctggagggaggtggaggagcgg
gccaagcaggaggaggagaggagctggagggaggaggagagggcccggcgcgaggcagat
cagaagaggagacaggaggaggagtactacaatcgtctggaggcggggcgccgccggcag
cacgacgaggcagagaggaagctgctgacgcccgaggagcctggtggtctgtaccggccg
cccctcccccgggactaccagccccccgagccccccactaacacgcccccgcccccccca
cagagaaacacctcctacctcaaaacccaggtggtctcccccgacgcgctctacaccgcc
acattcgtgtcctacgcaggtgacgaggaagacgatgaggaaggagaggaggcctccagg
gccagcgccctatcaggtcagcccaagctgtcggcgacccggaagtcgtacggagacctc
ccggtctcggggcacgggaagcctcggccgccgccaactgcccgcaagccccgcccattg
tctgacggcatcttcctgtcgagctcgtttcagctgccagtcaacaactccaacagtaca
ggccacgcccctccccctcccaccaaaccaagcttcctgaaaggatttgattcgtacact
ggaaaccctgcaggacttgtaggaacgggagaggtcttcaaggacaagtggaccaaaggc
caggagcaggagaacgcggctccaggagctccagagagcatgaccttcaaggagcgacag
cggctgttctcccagggcaaggaggtgtccaacaaggtcaaggcatcgcgcaagctcatg
gagctggagaatgagctcaacactaaatag
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integrated database retrieval system
