Gadus morhua (Atlantic cod): 115534736
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Entry
115534736 CDS
T10832
Symbol
esr1
Name
(RefSeq) estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
115534736 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115534736 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gmh03310
]
115534736 (esr1)
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
115534736 (esr1)
Nuclear receptors [BR:
gmh03310
]
3. Estrogen like
3A. Estrogen receptor
115534736 (esr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Oest_recep
zf-C17orf113
Motif
Other DBs
NCBI-GeneID:
115534736
NCBI-ProteinID:
XP_030201776
Ensembl:
ENSGMOG00000014898
LinkDB
All DBs
Position
21:3835844..3859713
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AA seq
669 aa
AA seq
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MLLRQSPAAHCRHPPGPPGPSPAPRASPDPASLETRSPPPSSSSPLSRPLPPLSAGMYPE
DSRGPGGIAAVDFLEAAYEYAAPSPPGPPGAPPPLYGHPAAAGYYTGSLDPHGGPPSDAS
LQSLGSGSTSPLVFVPSSPQLSPYLHPTGQPYYLEAPATPGYSMGSGPQHSLSREDLCDT
IEGLETYGVMGSLAASVSGSSRLVPGQGSGVAVGTVFELAKETRYCAVCSDYASGYHYGV
WSCEGCKAFFKRSIQGHNNYMCPATNQCTIDRNRRKSCQACRLRKCYEVGMMKGGMRKDR
GSRVLRRDKRRGVAGDRDKGPRQLENRTSPPQDGRRNCGGGGSRAGERTGADVGGAARGS
RIGIPPDQVLLVLQGAEPPILSSRQKMNRPYTEVSMMTLLTSMADKELVHMIAWAKKVPG
FLELSLHDQVQLLESSWLEVLMIGLIWRSIHYPGKLIFAQDLILDRTEGDCVEGMAEIFD
MLLATVSRFRMLQLNPEEFVCLKAIILLNSGAFSFCTSTMEALHDSLAVQGMLDTITDAL
IHHISQSGCSIQQQSRRQAQLLLLLSHIRHMSNKGMEHLYSMKCKNKVPLYDLLLEMLDA
HRLQRPVKAASHPRGGGPGDRETACTSGSSSCSELGTGHRGAGGLEGHGRAPGPGVLISG
GPLHECASV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcaggcagagcccggccgcacactgcaggcacccccccggcccccccggaccc
tccccggccccacgggccagcccggaccccgcctcgctggagacccgctcccccccgccg
agcagctcctcgccgctgtcgcgcccgctgccccccctctccgccggcatgtaccccgag
gacagccgcgggcccgggggcatcgccgcagtggacttcctggaggcggcctacgagtac
gcggcccccagcccgcccggccccccgggggcaccgccccccctctacggccacccggcc
gcggcgggctactacacgggctccctggacccccatggcgggcccccctcggacgccagc
ctgcagtccctgggcagtgggtccaccagccccctggtgtttgtgcccagcagcccccag
ctcagcccctacctgcaccccaccgggcagccctactacctggaggcccccgccacacct
gggtacagcatggggtccggcccgcagcactctctgtccagggaggacctctgcgacacc
atcgagggtctggagacctacggggtcatgggctccctggccgcctccgtgtccgggtcg
tctcggctggtgccgggtcaggggtcaggggtcgcggtgggcacggtgttcgagctggcc
aaggagacgcggtactgcgcggtgtgcagcgactacgcctcgggctaccactacggcgtg
tggtcctgtgaaggctgcaaggccttcttcaagaggagcatccaaggccacaacaactac
atgtgcccggccaccaaccagtgcaccatcgaccgcaaccgcagaaagagctgtcaggcc
tgtcgccttcggaagtgttatgaagtgggcatgatgaaaggaggtatgcgcaaggaccgt
gggagccgggtattgaggcgcgacaagcggcgtggcgtggccggcgaccgggacaagggt
cccaggcagctggagaacaggacgtcgcccccgcaggacgggaggaggaactgcggcggc
ggcggctccagagcgggcgagagaacgggggcggacgtcggaggagcggcgaggggttct
cggatcgggatccccccggaccaggtgctcctggtcctccagggggcggagcctcccatc
ctgtcctcccggcagaagatgaaccggccgtacaccgaggtcagcatgatgacgctgctc
accagcatggccgacaaggagcttgtccacatgatcgcatgggccaagaaggtcccaggc
ttccttgagctgtcccttcatgaccaggtgcagctcctggagagttcctggctggaagtc
ctgatgatcggcctcatctggaggtccatccactaccctgggaaactcatcttcgcacaa
gacctcatcctggacaggactgagggggactgcgtagagggcatggcggagatcttcgac
atgctgctggccaccgtctcacgctttcggatgctccagctgaaccctgaggagtttgtc
tgtctcaaggccatcatcctgctcaactctggggccttctcgttctgcaccagcaccatg
gaggcccttcacgacagcctggccgttcagggcatgctcgacaccatcacggacgccctc
atacaccacatcagccaatcaggatgctccatccagcagcagtcccggcggcaggcgcag
ctgctgcttctgctgtcccacatcagacacatgagtaacaaaggcatggagcacctgtac
agcatgaagtgcaagaacaaagtgccactgtacgacctgctgctggagatgctggacgcc
caccgtctccagcggcccgtcaaggcggcctcccacccccggggcgggggtccgggcgac
cgcgagacagcctgcaccagcggaagctccagctgctccgagttaggtaccgggcaccgc
ggggccggcgggctagagggccacggtcgggcccccggtcccggggtgctcatcagcggg
gggcccctccacgagtgtgcgtccgtctga
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