Gadus morhua (Atlantic cod): 115534871
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Entry
115534871 CDS
T10832
Name
(RefSeq) syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115534871
Membrane trafficking [BR:
gmh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115534871
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
115534871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
ANAPC4_WD40
Lgl_C
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
EIF3I
Synaptobrevin
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EML
CFAP43_N
Beta-prop_Vps41
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
115534871
NCBI-ProteinID:
XP_030202012
LinkDB
All DBs
Position
21:14299841..14344391
Genome browser
AA seq
1011 aa
AA seq
DB search
MTHVHTCRSCSTGKGRRMALYADHAAASAMCDSSGSVWSTAGLRMPQYSFEDLPLLLSSK
AHPGPVVHISDNPMDEGKLVIGYESGILVMWDLKSKKADYRYTYDEAIHSVAWHHEGKQF
ICSHSDGTLTIWNVRGQGKPIQTITPHGKQPKDGKKPEPCKPILKVEYKTTRAGEPFMIL
SGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQDPYAVVVLLEKD
LVVIDLAQNGYPIFENPYPLTIHESPVTCCEYFADCPVDLIPALYSVGSRQKRQGYSKKE
WPISGGNWGQGTQSYPEIIITGHADGTVKFWDASAIMLQVLYKLKTAKVFERSRSKEDKG
SMESDEDPYALQILAWCPESRVLCMSGVSATVLIYRFSKLEVTTETVQLLEVRMQYDVND
MDSPEMGGGDQTPALATPGASPQTSGPPSHPSTSSNNSDGGNMPCLKVRSAPLKQSPGYQ
VDLVVQLVWVSGEPPQQITSLALNSSYGLVVFGNSNGLAVVDYVQRSVLLNLGTVELYGS
NDPYQRQLRSPRKARQPSGGLCDINEGSATSEDRCKSPTSVLMSNSNLQQFYNGGGRGAK
MSRKLSLPTELKPDLVLLSVCPPRGANPLDHRDNSFSRSRSSSVTSIDKESRESISSFHF
CDTYVRKGDCALTPCLYVGTSLGTVLAVALTLPPAGEQRQLQPVIASPSGMLERVKGSIM
RMAFLDSTGMLLPPPHEPWFEPNLTASDGEEKGRKRRPVSVSPSASQDLNESQYAVVCSE
KQAKVLSLPSQNCVHKHSITEASFILRADVVQMSNSVCLAVFCANGHIMTLSLPGLRPLL
DVNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITYSQDTCENLQEMLGELFTPVETP
EAPNRGFFKGLFGGGAQSLDREELFGEISSGKASRSLAQHIPGPGGLEGMKGAASGIVGD
LARARIALDERGQKLGELEERTALMMNSADGFSKHAHEMMLKCKDKKWYQI
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgtgcacacgtgccgaagctgctccactggaaagggccggcgcatggcgctc
tacgcggaccacgctgcagccagcgctatgtgcgactcgtctggatcagtgtggtccacc
gcaggcctgcgcatgccgcagtactcctttgaagaccttccgttgctgttatcgtccaag
gcccacccgggaccggtggtgcacatcagcgacaacccaatggacgagggaaagctcgta
attggatatgagtcggggatcttggtcatgtgggatctgaaatcaaagaaggctgactac
cgctacacctatgacgaggcgatccactcggttgcctggcaccacgagggcaagcagttc
atctgcagtcactcagacggaactctgaccatatggaacgtccggggtcaggggaagccc
atccagaccatcacaccgcacgggaaacagcctaaggacgggaagaagccagagccctgt
aagcccatcctcaaagtggagtacaagaccaccagagctggggagcccttcatgatcctg
tccgggggtctgtcctacgacacggtgggccggcggccctgtctcacagtgatgcacggg
aagagtaccgccgtgctggagatggactaccccatcgtcgacttcctcacactctgtgag
accccctaccccaatgattttcaggacccctacgccgtagtcgtgcttctggaaaaggat
ttagtggtgatcgaccttgcacaaaatggttacccgatctttgagaacccctaccccctg
accatccacgagtcccccgtcacctgctgtgaatactttgccgactgccccgtggatctc
attcctgcactttattcagtcggctcgcggcagaaacgacagggctacagcaaaaaggag
tggcctattagtggtggaaactggggtcagggcacacagagctacccagagatcatcatc
acggggcatgccgacggaacagtgaagttctgggatgcttctgcaataatgctccaggtg
ctgtacaagctgaagacggccaaggtgttcgagaggagccggtccaaggaggacaagggc
agcatggagtcggacgaggacccctatgccctccagatcctggcctggtgtcctgagagc
cgggtgctgtgcatgtcgggcgtgtccgccaccgtgctcatctaccgcttcagcaagctg
gaggtcaccacggagacggtgcagctactggaggtgcgcatgcagtacgacgtgaacgac
atggactccccagagatggggggcggggaccagacgccggccctggccaccccgggggcc
tccccccagaccagcggacccccgtcacacccctccactagcagcaacaactctgacgga
ggcaacatgccctgccttaaggtgcgcagtgctcctctgaagcagtctcctgggtaccag
gtggacctggtggtccagctggtctgggtgagcggagagcccccccagcagatcaccagt
ctggccctcaactcctcctatggccttgtggtgtttggcaacagcaacgggctggcggtg
gtggactacgtgcagaggtcggtgctgctgaacctgggcaccgtggagctgtacggctcc
aacgacccctaccagaggcagctgcgctcgccccgcaaggcgcgccagccctccggaggt
ctgtgcgacatcaacgagggatcggcaacgtcagaagaccgctgcaagtctccaacctca
gtgttgatgtcaaacagcaatctacagcagttctacaatggcggtggtagaggagcaaag
atgtcacggaaattaagcttgccaactgagctaaagccagacttggtcctcctgtccgta
tgtccgccgcggggcgccaaccctctagaccaccgggacaactccttcagccgctcgcgc
tcctccagcgtcaccagcatcgacaaggagtcgcgcgagtccatctcctccttccacttc
tgcgacacctacgtccgcaagggcgactgcgccttgacgccctgcctgtacgtgggcacc
tccctcggcaccgtgctggccgtggcgctcacgctgccccccgctggcgaacagaggcaa
ctgcagcccgtcatcgcctcgcccagcgggatgctggagcgcgtgaagggcagcatcatg
cgcatggcgttccttgactcgacgggcatgctattgcccccgccccatgagccctggttc
gagcccaacttgacggcgtcagacggcgaggagaagggccgcaagcggcgtccggtgtcg
gtgtcgccgtcggcctcgcaggacctgaacgagagccagtacgccgtggtgtgctcggag
aagcaggccaaggtgctgtcgctgccgtcgcagaactgcgtgcacaagcacagcatcact
gaggcctccttcatcctgcgcgccgatgtggtgcagatgagcaacagcgtgtgcctggcg
gtcttctgcgccaacggacacatcatgaccctcagtctgcccggcctgaggcccctgctg
gacgtcaactacctgcccctgaccgacatgcgcatcgctaggaccttctgcttcaccaac
ctgggccaggccatgtacctcacctcccccaccgagatccagaggatcacctacagccag
gacacctgcgagaacctgcaggagatgttaggtgagctcttcacacccgtggagacacca
gaggcccccaacagaggcttctttaaagggctctttggaggcggcgcacagtctctggac
cgggaggaactattcggagagatttcgtccgggaaggcctccaggagcctggcccagcac
atcccggggcccgggggcctggagggcatgaagggcgcggcctcgggcatcgtgggcgac
ctggcccgggccaggatagccctggacgagcgaggacagaagctgggcgagctagaggag
aggacggcgctcatgatgaacagcgccgacggcttctccaaacacgcccacgagatgatg
ctgaagtgcaaagacaagaagtggtaccagatctga
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