Gadus morhua (Atlantic cod): 115535240
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Entry
115535240 CDS
T10832
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
KO
K10740
replication factor A3
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03030
DNA replication
gmh03420
Nucleotide excision repair
gmh03430
Mismatch repair
gmh03440
Homologous recombination
gmh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115535240 (rpa3)
03420 Nucleotide excision repair
115535240 (rpa3)
03430 Mismatch repair
115535240 (rpa3)
03440 Homologous recombination
115535240 (rpa3)
03460 Fanconi anemia pathway
115535240 (rpa3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmh03032
]
115535240 (rpa3)
03400 DNA repair and recombination proteins [BR:
gmh03400
]
115535240 (rpa3)
DNA replication proteins [BR:
gmh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
115535240 (rpa3)
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
115535240 (rpa3)
MMR (mismatch excision repair)
115535240 (rpa3)
DSBR (double strand breaks repair)
HR (homologous recombination)
115535240 (rpa3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_3
NMD3
Motif
Other DBs
NCBI-GeneID:
115535240
NCBI-ProteinID:
XP_030202147
Ensembl:
ENSGMOG00000027837
UniProt:
A0A8C5CQK0
LinkDB
All DBs
Position
22:18810818..18812306
Genome browser
AA seq
122 aa
AA seq
DB search
MSAIYEAPRARINTSMLSQYVSRPVCFVGRVEKVHPSGKSFTMCDGEGKVVSVELNEPLD
EELSGVVEVVGMVTNKGALMGSAYTIFQEEKGVAFDLELYNEALKVIHDFSQYYPFKVET
SG
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctatctatgaagccccgagagccagaataaacacgtccatgttgtcccagtat
gtgagccgccccgtctgcttcgtgggacgcgtggagaaggtccatccctcagggaagtcc
ttcaccatgtgtgatggagaagggaaggtggtgtcagtggagctgaacgaaccccttgac
gaggagctgagtggcgtggtggaggtcgttggcatggtgaccaacaagggagctctcatg
ggctctgcctacaccatattccaggaagagaagggcgtcgcttttgatctggaactttac
aacgaagctctcaaagtgatccatgacttctctcagtactacccctttaaagtggaaaca
agtggatga
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