Gadus morhua (Atlantic cod): 115535392
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Entry
115535392 CDS
T10832
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03082
ATP-dependent chromatin remodeling
gmh03083
Polycomb repressive complex
gmh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115535392 (rbbp4)
03083 Polycomb repressive complex
115535392 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
115535392 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmh03036
]
115535392 (rbbp4)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
115535392 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
115535392 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
115535392 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115535392 (rbbp4)
PRC2.2
115535392 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
115535392 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
115535392 (rbbp4)
Chromatin remodeling factors
NuRD complex
115535392 (rbbp4)
NuRF complex
115535392 (rbbp4)
NuRF complex (fruit fly)
115535392 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
AftA_C
Motif
Other DBs
NCBI-GeneID:
115535392
NCBI-ProteinID:
XP_030202411
Ensembl:
ENSGMOG00000006627
LinkDB
All DBs
Position
22:13601741..13607462
Genome browser
AA seq
431 aa
AA seq
DB search
MADKEGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDASGECRPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQLCDGLLQVQWSPHNETILASSGTDRRLNVWDLSKIGEE
QSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED
PESSADPEPTA
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggaaggtgcgtttgacgatgcggtcgaggaaagggttatcaacgaggag
tacaagatctggaagaaaaacactcccttcctttatgacctggtgatgacccacgctctg
gaatggcccagcctcaccgctcagtggcttcccgatgtctccagaccagagggcaaggat
tacagtgtccaccggctggtgttgggcactcatacgtcagacgagcagaaccatctggtc
atcgctagcgtccaattgcccaatgacgacgcccagtttgatgcctcacactatgacagc
gagaaaggagagttcggtggctttggctcagtcagtggtaagattgagattgagatcaag
atcaaccatgagggcgaggtgaaccgggcccgctacatgccccagaatccctgcatcatc
gccaccaagacccccacctcagacgtgctggtcttcgactacacaaagcacccctccaaa
cctgacgcgtcaggagagtgccgtccagacctgcgtctcagaggccatcagaaggagggt
tatgggctctcctggaaccccaacctgtccggctgcctgctcagtgcttcagatgatcac
acgatctgcctttgggacatcagcgcggtgcccaaagagggcaaggtggtggacgccaag
accatcttcacgggtcacaccgcagtggtggaggacgtctcctggcacctgctgcatgag
tctctctttggctccgtggccgacgaccagaagctcatgatctgggacacgcgctccaac
aacacctccaagcccagccacgctgtggacgcacacacagcagaggtcaattgcctgtcc
ttcaacccatacagcgagttcatcctggccaccggctcagcagacaagactgtggccctc
tgggacctgaggaacctgaaactcaaactgcactcctttgagtcacacaaagatgagatc
ttccagctctgcgatgggctgttacaggtccagtggtccccccataacgagaccatcctg
gcctccagtggaaccgaccgccggctcaacgtctgggacctcagtaaaatcggagaggag
cagtcgccagaagatgcagaagatggacccccagagctgctgttcatccacggaggtcac
acagccaagatctctgacttttcctggaaccccaatgagccatgggtcatctgctcggtg
tctgaagacaacatcatgcaagtctggcaaatggcggagaacatctacaacgacgaggac
cccgagagctcagcggaccccgaacccaccgcctaa
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