Gadus morhua (Atlantic cod): 115535412
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Entry
115535412 CDS
T10832
Symbol
vps45
Name
(RefSeq) vacuolar protein sorting-associated protein 45 isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115535412 (vps45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115535412 (vps45)
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115535412 (vps45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
115535412
NCBI-ProteinID:
XP_030202456
Ensembl:
ENSGMOG00000001629
LinkDB
All DBs
Position
22:2525505..2536437
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AA seq
615 aa
AA seq
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MNVTLAVKQYVTRMIEDSGPGMKVLLMDKDTTSIVSMVYTQSEILQKEVYLLERIDSQNR
DNMKHLKAICYLRPTKENVESLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EIQEFYGDFIAVNPHLFSLNLQGVARGRSWDPTMLARSTQGLTSVLLALKKCPVIRYQLS
SDMAKRLAESVKLIITKEYELFDFRKTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKDLREVVLSADNDDFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
GQQRLESISDMKAFVDSYPQFKKMSGAVSKHVTVVGELSRLVAERQLMEVSEVEQELACQ
NDHSSAQQKVRRLLRLPGVCELDAVRLVMLYALRYERHSNSALPAMMEELAKRGVSEKYR
KMVHSVVEYGGKRVRGSDLVTATDAVAITKQFLKGLKGVENVYTQHQPLLQDTLDQLVKG
KLRDAQFPYLGASSLRDRYTPGGPHLGASSLRDRYTPGGPHLGASSLRDRYTPGGPHLGA
SSLRDRPQDVLVFVVGGATYEEALCVYNLNRSVPGVRIVLGGTTVHSTKSFLEEVTMTTG
NISDRAGAGRNLSRR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgacgctggcagtgaagcagtacgtcaccaggatgatcgaggacagcgggccg
ggcatgaaggtcctgctgatggacaaggacacgaccagtatcgtcagcatggtgtacacc
cagtcagagatcctacagaaggaggtgtatctcctggagagaatcgactctcagaaccgg
gacaacatgaagcacctgaaagcgatctgttacctgcgtcctaccaaggagaatgtggag
agtctgatccaggagctgagaagacccaagtacagtgtctacttcatctacttcagtaac
gtcataagtaagagtgagatcaaagcactggcggaggccgacgaacaggaagtggtggcc
gagatccaggagttttatggggacttcattgctgtgaatcctcatctcttctcccttaac
ctgcagggcgttgccagggggcggagctgggaccccaccatgctggcccgctccactcag
ggcctgacatcggtcctgctggcgctcaagaagtgtccggtcatcagataccagctgtcc
tccgacatggccaagagactggccgagagcgtcaagctcatcatcactaaggagtacgag
ttgtttgacttcaggaagactgaagttcctccactgctgctgatcctcgaccgcagcgac
gacgccatcacccccctcctcaaccagtggacgtaccaggcgatggtccacgagctgctg
ggtctgaacaacaaccgcatcgacctgtcccgcgtcccggggatcagcaaggacctccgc
gaggtggtgctgtcggccgacaacgacgacttctacgccaacaacctgtacctaaacttc
ggggagatcggcaccaacatcaagaacctgatggaagacttccagaagaagaaaccgaaa
ggacagcagaggctggagtccatctcagacatgaaggccttcgtggacagctacccccag
ttcaagaagatgtcgggggcggtgtcgaagcacgtgacggtggtgggggagctgtcccgc
ctggtggcggagcggcagctgatggaggtctcagaggtggagcaggagctggcctgtcag
aacgaccactccagcgcccagcagaaggtgcgtcggttgctccgcctcccgggggtgtgt
gagctggacgccgtccgcctggtgatgctctacgccctgcgctacgagcgccatagcaac
agcgcgctgcccgccatgatggaggagctcgccaagaggggcgtgtccgagaagtaccgc
aagatggtccacagtgtggtcgagtacggggggaagcgggtgagaggaagtgacctcgtc
acggcaacggacgccgtggcgataaccaaacagttcctcaaggggctcaagggcgtggag
aacgtgtacactcagcaccagccgctgctacaggacactctggaccagctggtgaagggg
aagctgagagacgcacagttcccctacctgggggccagcagcctcagagacaggtacaca
cctgggggccctcacctgggggccagcagcctcagagacaggtacacacctgggggccct
cacctgggggccagcagcctcagagacaggtacacacctgggggccctcacctgggggcc
agcagcctcagagacaggccccaggacgtgctggtgttcgtggtgggcggggccacctac
gaggaggcgctgtgcgtctacaacctgaaccgctcggtgccaggggtccgcattgtcctg
gggggcaccaccgtgcacagcaccaagagcttcctcgaggaggtaaccatgacgaccggc
aacatcagcgacagggccggagcggggcggaaccttagcagacgctga
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