Gadus morhua (Atlantic cod): 115535512
Help
Entry
115535512 CDS
T10832
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115535512 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115535512 (nup85)
03036 Chromosome and associated proteins [BR:
gmh03036
]
115535512 (nup85)
Messenger RNA biogenesis [BR:
gmh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115535512 (nup85)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115535512 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
115535512
NCBI-ProteinID:
XP_030202632
Ensembl:
ENSGMOG00000004717
LinkDB
All DBs
Position
2:13855779..13863573
Genome browser
AA seq
649 aa
AA seq
DB search
MEELDVEPTTTNIPASEGNHLGFVWGPGDILVYDTIYKSSGSVGTCSSFIHEVRKDEDIY
SPILRKLFNESHHIFVGLQTIREDLPNKNKKTQFVSISKNYRSVIRACMEELQQVAVLTQ
DTELATQYGNQVSILLAIELIWNLCEVLFIDAAPGGSLLLHLLDWVRLHKADVDEKAQEV
LQSESPTEHHGYWDVVLSYLMQGRMDEARQMLVKWGVLKPAARSMYKQMDNLLSKMPVYN
PGGSQTLTEFDVKWRHWHDMVDHSLQDNSFASDPNLELICKILMGDEDAILEQKDLLSTW
YHFLVTRLLFSHPTVKPTELHYYAQSCLAMFDSRSAPEPLDSILLAAFEFDIHQVIKDCS
IALNNWWFVAHLTDLLDHCNLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVDYFD
HCPEFGRVYLEQQIEHVPLDTERKALKVLRICEQRQMSEQVRSICKIMAKRALRNNRLGS
ALSWSIRAKDAAFATLISERFLQDYCARGTFSDLDLIDNLGPAMLLSDRLTFLGKYREFH
KLYGENRFSDAATLLLSLMTAQIAPRSFWMTLLTDALPLLEQKEAIFSADQTHELIFCLE
DLTSSLKIPTGLDAPMQDEDVEVTKVELLRLALARNLAMAIVKEGTVAV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttagacgttgagccgacaacaactaacatcccggccagtgaaggaaatcat
ttggggtttgtttggggtcctggagacatattggtgtatgacactatctacaaatcatca
ggctctgtgggtacatgctcctccttcatccatgaggttaggaaagatgaggacatctac
tctcctattttacgcaaactctttaatgaatcccaccacatcttcgtcggactgcagacc
attagagaggacctgcctaacaaaaacaagaaaacacagttcgtcagcatcagtaaaaac
tacagatcagttattcgagcgtgcatggaagagctacagcaagttgcagttttaacacaa
gatacagaattggccacacagtatggaaatcaggtgtcaattctcttggctatcgagctg
atctggaatctttgtgaagtgcttttcattgatgctgctccaggggggtctcttctgctg
cacctgctggactgggtgaggctgcacaaggctgatgtggatgagaaggcccaggaggtc
cttcagagtgagagccccactgagcaccatggctactgggatgtggtgctgagctatctg
atgcagggcagaatggacgaggccagacagatgctggtgaagtggggcgtgttgaagccg
gctgccagaagcatgtataagcagatggacaacctgctcagcaagatgcctgtctacaac
cctggcggaagccagacactgacagagttcgacgtcaaatggagacactggcacgacatg
gtggaccacagcctgcaagacaactccttcgccagtgatcccaacctggagctcatctgc
aagatcttgatgggggatgaggatgccatactggagcagaaggacctgctcagcacctgg
tatcacttcctggtcacccgcctgctcttctcccaccccacggtcaagcccacagagctg
cattactatgcacagtcatgcctggccatgtttgactcgcgaagcgccccagaacctctg
gacagcatcttattggctgcctttgagtttgacatccaccaggtcatcaaggactgcagc
attgccctcaacaactggtggtttgttgcccatctgacggacctactggatcactgcaac
ctccttcagtcccacaacctacattttggctcgaacctgagggagtttctgctgctggag
tatgcctcgggtctgttcacccatcacagtctgtggcagctggcggtggactactttgac
cactgtcccgagtttggccgcgtatacctggagcagcagattgagcatgttcccctggac
acggagcgcaaggctctcaaggtcctcaggatctgtgaacaaaggcagatgtccgagcaa
gtgcgaagcatctgtaagataatggccaagcgggcactgaggaacaaccggcttgggtct
gctctctcctggagcatcagggccaaagacgccgccttcgccacactcatatcagagaga
ttcctgcaagactactgcgccaggggtaccttctctgatctagacctgatcgacaacctt
gggccggccatgttgcttagcgacaggctcaccttcctaggaaagtaccgcgagttccac
aagctgtacggggaaaatcgcttctcggacgccgccacgctcctcctgtccctcatgacg
gcacagatcgccccgcgcagcttctggatgaccctgctgacggacgcgctgcccctgctg
gagcagaaggaggctatcttctcagcggaccaaacccatgagctcatcttctgtctggag
gacctcacttcctcactgaagatccccacgggcctggatgcacccatgcaggatgaagac
gtggaggtaaccaaggtggaactgctgagactggccctggctaggaaccttgccatggcc
atcgtcaaagaagggaccgtggcagtctga
DBGET
integrated database retrieval system
