Gadus morhua (Atlantic cod): 115535609 Help Entry 115535609         CDS       T10832                                  Symbol col1a2 Name (RefSeq) collagen alpha-2(I) chain   KO K06236   collagen type I alpha Organism gmh  Gadus morhua (Atlantic cod) Pathway gmh04510   Focal adhesion gmh04512   ECM-receptor interaction gmh04820   Cytoskeleton in muscle cells Brite Glycosaminoglycan binding proteins [BR:gmh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115535609 (col1a2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  115535609 NCBI-ProteinID:  XP_030202823 Ensembl:  ENSGMOG00000013455 LinkDB All DBs Position 22:complement(16244870..16266481) Genome browser AA seq 1350 aa AA seqDB search MLSFVDTRILLLLAVTSYLATCQSSGPKGPRGERGPQGPDGRDGRPGNPGPAGPPGPPGL GGNFAAQYDHNKGADTGPGPMGMMGMKGPPGPPGPPGSQGHTGHAGEPGEPGQTGPVGSR GPPGPSGKGGDDGNNGRPGKPGDRGTAGPQGARGFPGTPGLPGMKGHRGYTGIDGRKGES GASGIKGESGAHGSSGSPGMAGARGTIGERGRAGPAGPAGARGADGNVGPAGPAGPLGSS GAPGFPGSPGPKGEVGPAGSSGPSGPQGSRGEAGTNGAGGPVGPPGNPGNNGLNGAKGAS GAAGVSGAPGFLGARGGPGPQGPQGAAGARGLSGDPGTSGVKGDSGPKGEPGHHGPQGAP GPNGEEGKRGPSGEAGASGPAGPRGARGAGGSRGIPGSEGRSGPIGMPGARGATGAGGAR GAPGDAGRAGETGLTGARGLPGSPGSSGPPGKEGASGPAGQDGRTGPPGPTGPRGQPGSI GFLGPKGPSGEAGKPGDKGPAGASGLRGAPGPEGNNGAAGALGPVGGAGEKGEQGPAGAP GFQGLPGTAGPAGEAGKHGDRGVPGDQGLAGPAGIKGERGTPGVAGTSGPQGSIGARGPA GLPGTDGGKGEPGSVGAAGNAGHQGSGGMPGERGGAGTPGGKGEKGEGGHRGPDGNVGRD GSRGAPGPGGPPGPNGANGDKGESGSFGPSGPSGVRGPSGERGEVGPAGSAGFAGPPGAD GPSGVRGERGPAGGKGDLGPAGPAGPAGQSGPSGASGPAGPPGGRGDNGPSGLTGFPGVG GRVGAAGPSGIVGPPGSSGAAGKDGPRGLRGDSGPAGPPGEQGMLGPAGLAGDKGPSGDS GPAGAPGTSGPSGQLGGQGYVGLPGPRGDRGVPGGAGGLGESGRVGPTGSAGPRGPSGNI GMPGMTGPQGEAGREGNTGNDGPPGRPGIAGIKGDRGEPGSNGPMGMAGAPGPSGQTGQA GRGGNRGESGPGGPTGPSGMAGARGAAGPAGPRGEKGVGGEKGERGMKGLRGHGGLQGMP GPAGQSGDSGSAGPAGPSGPRGPAGPHGPPGKDGRSGSHGTIGAPGARGPPGYLGPAGPN GSPGLPGPPGPAGDGYDVSGGYDEYRADQPNLRAKDYEVDATIKSLNTQIENLLSPEGSR KNPARTCRDIKLGHPEWTTGFYWIDPNQGCTNDAIKVFCDFSTRETCIFAHPASIAQKNW FRSTETKKHVWFGETINGGTEFTYNDETLSPQSMATQLAFMRLLSNQASQNVTYHCKNSV AYMDAESGNLKKAVLLQGSNDVELRAEGNSRFTFNVLEDGCTSHTGEWSKTVIEYRTNKP SRLPILDIAPLDIGGADQEFGLDIGPVCFK NT seq 4053 nt NT seq  +upstreamnt  +downstreamnt atgctcagctttgtggatacccggattctgttgctgcttgcagtaacctcatacctagca acatgtcaaagctcgggcccgaaaggaccaagaggtgaaaggggaccccagggccctgac gggagggacggcagacctggcaaccccggccctgctgggcccccaggaccccctggcctc ggcggaaactttgctgctcagtacgatcacaacaaaggcgctgatactggtcccggcccc atgggaatgatgggaatgaaaggcccacctggacctcccggcccccctggctcccaggga cacaccggacacgctggtgagcccggagagcccggacagaccggccccgttggttcccgt ggaccccctggaccatctggcaaaggtggagatgacggtaacaacggcagaccaggcaag cccggagacagagggaccgctggaccccagggtgcacgtggattccccggaacccctgga ctccccggcatgaagggacacagaggttacactggtattgatggtcgcaagggagagtcc ggtgcatccggaatcaagggagagagtggtgcccatggatcttccggaagcccaggaatg gctggagctcgtggtacgattggagagagaggccgtgctggacctgctggacccgctggt gctcgtggtgctgacggcaacgttgggcccgccggtcccgctggacctctcggttcatct ggtgctcccggtttccccggctcccctggccccaagggagaggttggacccgctggatca tccggaccctccggacctcagggatcgagaggtgaggccggtaccaatggtgctggtgga cccgtcggaccccctggcaaccctggtaacaacggcctgaacggagccaagggagcttcc ggtgccgctggtgtttctggagcccctggcttcctcggagcccgtggtggccccggcccc cagggacctcagggcgctgctggagccagaggtctttctggtgatcccggtacctcaggc gtcaagggagactctggccccaagggagagcctggtcaccacggaccccagggtgccccc ggacccaacggagaggagggaaagagaggacccagcggcgaggccggagccagcggcccc gcgggaccccgtggagccagaggtgcaggcggcagccgtggaatccccggatcagaggga agatctggccccattggcatgcccggtgcccgtggtgctaccggtgcaggtggagcgcgt ggagcccctggtgatgctggccgcgctggagagaccggtctgaccggagccagaggtctg ccaggtagccctggaagctctggacccccaggcaaagagggagcatctggtcccgctgga caagatggccgcactggtccccccggacctactggaccccgcggtcagcccggtagcatc ggcttccttggccccaagggtccttctggtgaggctggcaagcccggagacaagggaccc gccggcgcctctggtctgagaggagcccctggccctgaaggcaacaatggtgcagctggc gcccttggacccgttggaggtgctggtgagaagggagagcagggacccgctggagctcct ggtttccagggactccctggaaccgctggacctgccggagaggctggcaagcatggagat agaggtgtccccggagatcagggccttgctggacccgctggaattaagggagagcgcggt acccccggagtcgccggaacctctggacctcagggatccatcggagcccgtggacccgct ggtctccccggtaccgatggtggcaagggagagcctggctccgtcggagctgctggtaac gccggacaccagggaagcggtggcatgcccggagagcgtggaggtgccggtacccccggt ggcaagggagagaagggagagggtggccacagaggtcccgacggaaatgttggcagagat ggatcccgtggtgcccccggacccggcggacccccaggacctaacggtgctaacggagac aagggtgagagcggttccttcggaccttccggcccctcaggagtccgtggaccctctggt gagcgtggagaggttggacccgccggatccgctggattcgctggaccccctggtgctgat ggaccctcaggagtccgtggagagcgtggacccgccggaggcaagggagaccttggaccc gctggccctgccggacccgccggacagtccggaccctctggtgcttctggacccgctgga ccccccggtggtcgtggtgacaacggacccagtggtctgactggtttccctggtgttggt ggtagagttggcgctgccggtccctctggcatcgttggcccccctggctcctccggcgcc gccggtaaggacggcccccgcggtctccgtggagactctggccccgctggcccccctggt gagcagggtatgcttggccccgctggtctggctggagacaagggaccctctggagactcc ggtcccgctggtgcccccggaacctcaggaccctctggtcagcttggaggacagggatac gttggtctgcccggaccaaggggagatcgtggtgtccccggtggagctggaggcctggga gagtctggtagagttggccccactgggtctgctggaccccgtggaccctctggaaacatc ggcatgcccggtatgaccggaccccagggagaggctggccgcgagggtaatactggaaac gatggaccccctggccgtcccggtatcgccggaatcaagggagaccgtggagagcctgga tccaacggacccatgggcatggctggagctcccggaccctctggccagaccggccaggct ggccgaggtggaaaccgcggagagtctggacccggaggccccaccggcccctcagggatg gctggagctagaggcgcagctggacccgcaggaccccgtggtgagaagggtgttggtgga gagaagggagagagaggcatgaagggactgcgtggacatggtggactccagggaatgccc ggacccgccggccaatctggtgattctggctctgctggacctgctggaccctctggaccc agaggccccgctggaccccacggaccccctggcaaggatggtagatctggtagccatgga accattggtgctcccggtgcccgtggaccccctggatacctcggacccgctggtcccaac ggatctcccggtcttcccggaccccctggccccgccggcgacggatacgacgtgtccgga ggatacgatgagtacagagccgaccagccaaacctgagggccaaggactacgaggttgat gccaccatcaagtccctgaacacccagatcgagaacctgctcagccccgagggctccagg aagaaccccgcccgcacctgccgcgacatcaagctcggacaccccgaatggaccaccggc ttctactggatcgaccccaaccagggatgcaccaacgacgccatcaaggtgttctgcgac ttctccacccgcgagacctgcatcttcgcccaccccgccagcatcgcccagaagaactgg ttcagaagcaccgagaccaagaagcacgtctggttcggagagaccatcaacggaggcacc gagttcacctacaacgacgagaccctcagcccacagagcatggccactcagctggccttc atgcgcctgctgtccaaccaggccagccagaacgtcacctaccactgcaagaacagcgtg gcctacatggacgctgagagcggcaacctgaagaaggccgtgctgctgcagggctccaac gacgtggagctccgcgccgagggcaacagccgcttcaccttcaacgtgctggaagacgga tgcacttcacacactggcgaatggagcaagacagtcatcgagtacagaacaaataagcca tctcgcctgcccatcctcgacattgcacctttggacattggtggagccgatcaggagttt ggcttggacattggcccagtctgtttcaaataa

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