Gadus morhua (Atlantic cod): 115535826
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Entry
115535826 CDS
T10832
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115535826
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115535826
PBAF complex
115535826
GBAF(ncBAF) complex
115535826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115535826
NCBI-ProteinID:
XP_030203212
Ensembl:
ENSGMOG00000017055
LinkDB
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Position
22:complement(22195671..22205652)
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AA seq
926 aa
AA seq
DB search
MATMSGGSNLVMAGTSQSGTGANANRKKEGIISARFWESPDTLIQLDNVRQWIGKHYKKY
VLVDAPSCQSLSAVTLQLLQFHEETFGRHATSPALTKLPAQCFLDLRPGGGLCHILGCAY
KFKAEQGWRRFDLQNSSRTERNVEMFSTMERALVQNNCLARPVVYLDTALDQELASRLSN
VIIKHQGSVTEDRALASHHLYPSTPSSTDEGEWMRPIMKRDTHILVHWGMNPDSYDSWLP
LGEVEKEVEEQPQSEKPWRVSTRWVLDTDVYNEWMNEEDYHVNERHAPIIFRQRLHLREE
QDQKLTPLKKRRRSPSPSSSEGRKKGKKGRRHGPQEEVPEEDLTKDMEDPTPVPNMEEVV
LPKNVNFKKDSENTPVKGGTMADLDELDDDFPGREDEDGRADVSHLSDVEDNIPEQTHHI
IIPSYTSWFNYNSVHQIEKRALPEFFNGKNKSKSPEIYLAYRNFMTDTYRLNPQEYLSST
SCRRSLTGDVCGVMRVHSLLEQWGLINYQVDAESRPLPMGPPPTPHFNVLSDTPSGLAPL
QHKPLQVSASQHMLFFPERIRDKPTDSQNFGLRNDIYARKHPKSKGASAGREWAEQETLL
LLEALEVYRDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSASLGPLAFQPVPFNQ
SENPVMSTVAFLASVVDPRVASAAARAALEEFSRVQEESVEKAAIQLDKTEPLDGEKKDI
RPSALQAPGGLDGLKGEPSGGPAEDSRVKTENANSILPEERDDRGDDEDRGGEGLQQSGG
MELELVESSVATAAAAALSSAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEE
LETIMDREKEALEQQRQQLLSERQTFHAEQLKHAELRVRQQRETPAQPGFTMQHSGLSVP
GRMMPGGGNSQPTGPRQPGAPNGMCG
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggctacaatgtctggaggatctaacttggtgatggcggggacgagtcagtccggcaca
ggagcgaatgcaaaccgaaaaaaagaagggattatatctgctaggttctgggaaagcccg
gacactttgatccaattggacaacgtaagacagtggatcgggaagcattacaaaaagtac
gtgctggtggatgctccgtcctgtcagtctctgtctgcagtgaccttacaacttctccag
ttccacgaggagacctttggaaggcatgctacaagccctgctctaacaaagctgcccgca
caatgctttcttgacctccgaccagggggcgggctctgtcacatacttggttgtgcctac
aaatttaaggctgagcagggctggcggcgctttgacctgcagaattcgtcacggacagag
cgcaacgtggagatgttcagcaccatggagagggcattggttcagaacaactgcctggca
cggcctgtggtttacctggacaccgcgttggaccaggagctggccagcaggctgagtaac
gtcatcatcaagcatcagggctcagtaaccgaggaccgagctcttgccagtcatcacctt
tacccatcaacaccatcatcaacagacgaaggtgaatggatgcgtccgatcatgaagaga
gacacacatatcctggtgcactggggaatgaaccctgatagctatgacagctggctgccc
ctgggtgaggtggagaaggaggtcgaagagcagccgcagtccgagaaaccatggagggtc
agtacacgctgggttttggacacagatgtttacaacgagtggatgaacgaggaggactac
catgtgaacgagagacacgcccccatcatcttccgacagaggctccacctccgggaggag
caggatcagaagttaacccccctcaagaagagacgtcgctccccctctccttcctcctct
gaaggaaggaagaaaggaaagaagggacggcggcatgggccgcaggaggaggtgccagag
gaagatctgaccaaagacatggaggaccccactcctgtgcccaacatggaggaggtggtc
ctgcccaagaacgtaaacttcaagaaagacagtgagaacacgcctgtgaaaggagggaca
atggccgacctggatgagctggacgatgacttccctggacgggaggacgaggatggtcga
gcagacgtgtcccacctttcggacgttgaagacaacatccctgagcagacgcaccacatc
atcatcccgagctacacctcctggttcaactacaacagtgtccaccagatcgagaaacga
gctctcccagagttcttcaacggcaagaacaagtccaagtcccctgagatctacctggcc
taccgcaacttcatgacggacacctaccgcctgaacccccaggagtacctcagctccacc
tcctgcagacgcagcctcactggggacgtctgtggcgtcatgagggtccactccctgttg
gaacagtggggcttgatcaactaccaggtggacgccgagagcagacccctccccatgggg
cccccgcccaccccccacttcaacgtgctgtcggacacgccctccggcctggccccgctg
cagcacaagcccctgcaggtctcagcctcccagcatatgctcttcttcccagagaggatc
agagataagcccaccgacagccagaactttggcctccgcaacgacatctacgcccggaag
caccctaagagtaaaggagcgagcgcaggaagggaatgggccgagcaagagaccctcttg
ttactagaggccctggaggtgtaccgggacgactggaacaaggtgtcggagcacgtgggc
tccaggacccaggacgagtgcatcctgcacttcctgcggctgcccatcgaggacccctac
ctggaggactcctccgcctcgctggggcccctggccttccagcctgtgcccttcaaccaa
tcggagaaccccgtcatgagcacggtggccttcctggcgtccgtggtggacccccgcgtg
gcgtcggctgcagcccgggccgctctagaggagttctccagagtgcaggaagagtccgtg
gagaaagccgccatccagctcgacaagacagaacctctggacggtgagaagaaggatatc
cgccccagcgcccttcaggcaccaggcggactggacgggctgaagggcgagcccagcggg
gggcccgccgaggacagccgtgtgaagaccgagaatgccaacagcatactcccggaggag
agagatgacaggggggatgatgaagacaggggtggggagggcctccagcagagtggaggg
atggagctggagctggtggagagcagcgttgccacggcagcagcggccgccctatcgtct
gcagccaccaaggccaagcacctggcggcggtggaggagcgtaagatcaagtccctggtg
gcgctgctggtggagacgcagatgaagaagctggagatcaagctgaggcactttgaggag
ctggagaccatcatggaccgcgagaaggaggcgttggagcagcagcggcagcagctgctg
tcggagaggcagacgttccacgccgagcagctgaagcacgcagagctgagggtccgccag
cagagggagacaccggcgcagcccgggttcaccatgcagcactcgggcttgtctgtgccc
ggtaggatgatgccaggcggggggaacagccaaccaacaggtccccggcagccaggggcc
cccaacggcatgtgtggttag
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