Gadus morhua (Atlantic cod): 115535972
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Entry
115535972 CDS
T10832
Symbol
jarid2
Name
(RefSeq) protein Jumonji
KO
K11478
protein Jumonji
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115535972 (jarid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmh03036
]
115535972 (jarid2)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
115535972 (jarid2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
115535972 (jarid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
115535972
NCBI-ProteinID:
XP_030203459
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All DBs
Position
22:complement(7532493..7639931)
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AA seq
1552 aa
AA seq
DB search
MMSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKSAQKRQMDGDGTTNPDGS
LTNGQLNGSGSKGGHKEERSKSLDGSNKYSEDGPAKKRPRLQAQRKFAQSQPNSPSTTPV
KVATEGGSAPASLPLAPPPSSSSSSSLSSLSSLCLSSCASASASTAVSSAPASAPASAST
STSTASAAASIQELTRRKPKTEDFLTFLCLRGSPALPSHMAYFGSSQDEEDLEDNCGETR
EEPVRKSHYHGNGPYASYTSSSSCQSTPRKGKTPGRQPLNGHVFNGHGKAGTRESPRGPK
AGSVRREPIRPPPPPPPPPLLRERSERAEAREQTREQHAREQQALASARSANGLLARGRA
AEELRKQASRVNGLTRGSTAGAKKGRDFRLPARTVKKYTATVSKGHVTYTKAKQRDLGKK
TKQLSSSKHSNGSGAAAHNHSHNQHSQPAAGPPPAHSGRAAPAAAAAASTAPAHHSNAKT
RKQVLMSNGGLLHKVAAGTRLNGRLNGQRHNYQAQAQAQADSQGREGREGREGREGLRHS
KRRLESSGGGGGGGGGEAKRSGAVAATTATTAALAEAKKAKLQAPPLETRSNSSTGRKAG
LQEKAAAPLAPVTNGHAPEPTAATAPSAPVALPSTPPPRQSPPPSSPAASTEPINTRPKR
ASAGKLMLIRQAQQQQQSRSHARSASSSSSSSSSSSSSSSSSSSSSSSPAPGHNPGRAGT
TSDPQHPAAAASPSLSTSSPSSSRTGLHAGPPGPGDREREWEREKELSRQQEGEPDRERR
RSRPEGWPSLSAAPVLRPGSQEFQDPLVYLAAVRERAEGAGLCRVVPPHDWRPECKLSEE
MRFVTQVQRVHKLGRRWGPNVQRLACIRKHLKAQGIRMDETPVIGGCEVDLARFFQLIND
MGGMQQVMDLKKWNKLADLLRIPRSAQDRLAKLQEAYLQYLLSYDSLGAPERLRLHAQVL
REKRKLEARRGPLEAHADPLLAGPGGGLVLLPRYEPKNGLACGLVAGAAGAGHRRGGGGA
AAAACRRLQELEAQVKAGRRRLFTQEQQSGREEEEEEEEALCGEEEEEEDEEEEEEEEEE
DAGVLSDQHKCIYKGKSMSLTNFFRIARNTMTMCFNKDPGEAEVEQEYWRIVEQRDCHVA
VHHGKVDTSTHGSGFPTGKSEPFSKHGWNLTVLPNNSGSILRHLGAVPGVTIPWLNIGMV
FTTSCWSRDQNRLPYIDYLHTGADCIWYSVPAEDKANLDKVVHTLLQANGTPGLDMLEKN
IMISPEVLCREGIKVYRTVQRCGEFVVCFPGAFVSKVCCGYNVSETVHFATPHWMDLGYQ
AAKDLKCRRIAKPFSMEKLLYQIASAESKRDNGLLLNTIAALLKDLRNMEMRQREELFQA
GLLSSARYGTHDGSLGPTESRKKPRGKWLPLESSERRCQTCLHLCYLSMVVQETDNVVFC
LECALRYVDKHKSCRGLKMMYRYDEEQINSLVNQVCGKALGKSSGGVGVGGAGGGGGGGG
GLLVVGGDLRHSPSQGVKASPAKRGPRKRATVEVSLSRLSSAHMPKAAAAVS
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaaagaacgacctaagaggaacatcattcaaaagaaatacgatgacagtgat
ggaatcccgtggtcagaggagcgggtggtgcgcaaggtgctgtacctctccctcaaggag
ttcaagagcgcgcagaagcggcagatggatggggacggaaccacaaaccccgacggttcc
ttgacaaatggacagctgaacggctcggggtcaaagggcggccacaaggaagagcgctcc
aagagcctggatgggagcaacaagtactcagaggacggccccgcgaagaagaggcctcgg
ctccaggctcagaggaagttcgcccagtcccagcccaactcccccagcaccacgcccgtc
aaggtggccaccgaggggggctcggcgccggccagcctgccgctcgccccgcccccttcc
tcctcctcctcatcctccctctcctccctgtcctcgctctgcctctcctcctgcgcctcg
gcctcggcctccaccgccgtctcctccgcccccgcctcggccccggcctccgcctccacc
tccacctccacggcctccgccgccgcctccatccaggagctgacccggcgcaagcccaag
acggaggacttcctcacgttcctctgcctgagaggctccccggccctgcccagccacatg
gcctacttcggcagctctcaggacgaggaggacctggaggacaactgcggggagacgcgg
gaggagcccgtcaggaagagccattaccacggcaacggcccctacgcctcctacacctcc
tcctcctcctgccagtccaccccgcgcaagggcaagaccccgggcagacagcccctcaac
ggacacgtgttcaacgggcacgggaaggcgggcaccagggagagcccgcgggggcccaag
gccgggtccgtccgccgcgagccgatacgcccgcccccccctccgccgccgccccccctg
ctgagggagcgcagcgagcgggccgaggcgcgggagcagacccgggagcagcacgcccgg
gagcagcaggccctggccagcgcccggagtgccaacgggctgttggcccgggggcgggcc
gccgaggagctccgcaagcaggcctccagagtgaacgggctgacgcgaggctccacggcg
ggcgccaagaaggggcgggacttccggctgccagcccgaactgtgaagaagtacacggcc
accgtgtccaagggccacgtcacctacaccaaagccaagcagagggacctgggcaagaaa
accaaacagctcagcagcagcaaacacagcaacggcagtggggccgctgcccacaatcac
agccacaatcagcacagccagccagcagccggccccccgccggcccactcagggagagcc
gcaccggcggcggcggcggcggcgtccacagcgccggcccaccacagcaatgcaaaaacc
cgcaaacaggtgctaatgtccaacggggggctgctgcacaaggtggccgcgggcacccgc
cttaacggccgcctcaacgggcagcgccacaactaccaggcccaggctcaggcgcaggcc
gacagccagggccgggagggccgcgagggacgcgagggccgggagggcctgcgccactcc
aagaggcggctggagtcgtcgggcggcggcggcggcggcggcggcggcgaggccaagagg
tccggcgcagtcgccgcgacgaccgccaccaccgccgccctcgccgaggccaagaaggcc
aagctccaggcccctcccctggagacgcgtagcaacagcagcacgggccggaaggcgggc
ctgcaggagaaggccgccgccccgttggcgccggtgaccaacggacacgcccccgagccc
accgccgccacggcgccctccgccccggtcgccctgccctccacgccccctccccgacag
agcccgcccccctcctcaccagcagccagcacggagccaatcaacacgcggcccaagcgg
gcgtcggcgggcaagctgatgttgatccgacaagcacagcagcagcagcagagcaggtct
cacgctcgcagcgcctcctcctcctcctcctcctcgtcctcctcctcttcctcgtcgtcc
tcgtcctcgtcctcttcctcctcccccgccccgggccacaacccggggcgcgccggcact
acctcagacccccagcacccggcggcggccgcctccccctccctctccacctcctccccc
tcctcctcccggacgggcctgcacgccggcccccccggcccgggggaccgcgagcgggag
tgggagcgggagaaggagctctcccggcagcaggagggcgagccggaccgggagcgccgg
cggagccgccccgagggctggccgtcgctgagcgcggcgcccgtcctccggccgggctcg
caggagttccaggaccccctggtgtacctggcggcggtgcgggagcgggcggagggcgcg
gggctgtgccgcgtggtgcccccccacgactggcggcccgagtgcaagctgagcgaggag
atgcgcttcgtgacgcaggtgcagcgcgtccacaagctgggccggcgctgggggcccaac
gtgcagcgcctggcctgcatccgcaagcacctcaaggcccagggcatccgcatggacgag
acccccgtcatcggcggctgcgaggtggacctggcccgcttcttccagctgatcaacgac
atgggtggcatgcagcaggtcatggacctgaagaagtggaacaagctggccgacctgctg
cgcatcccgcgctcggcccaggaccggctggccaagctgcaggaggcctacctgcagtac
ctgctctcctacgactcgctgggcgcgcccgagcgcctgcggctgcacgcgcaggtgctg
cgcgagaagcgcaagctggaggcgcgccggggccccctggaggcccacgccgaccccctg
ctggcggggcccggcgggggcctggtgctgctgccgcgctacgagcccaagaacgggctg
gcgtgcgggctggtggcaggcgcggccggggcggggcaccggcgcggcggcggcggggcg
gcggcggcggcctgtcgtcgactgcaggagctggaggcgcaggtgaaggcgggacggcgc
cggctcttcactcaggaacagcagagcgggcgggaggaggaggaggaagaggaggaggcc
ctgtgtggggaagaggaggaggaggaggatgaagaggaggaggaggaggaggaggaagag
gatgcaggtgttctcagcgaccagcacaagtgtatttacaaggggaaatctatgtctctg
accaacttcttcaggatagctcggaacaccatgaccatgtgctttaacaaggaccccggg
gaggccgaggtggagcaagagtactggaggatcgtggagcagagggactgccacgtggca
gtgcatcatgggaaggtggacaccagtactcacgggagtggattcccaacggggaaatca
gagccattttcaaaacacgggtggaacctcaccgtccttcctaacaactctggatccatt
ctgaggcatctgggtgctgtacccggggtgaccattccctggctgaacattggcatggtc
tttactacctcatgctggtctcgagaccaaaaccgccttccatacatagattacctacac
actggtgctgactgcatttggtattctgtccctgcggaggacaaggccaacctggacaag
gtggtccacacgctgctccaggccaacggcacgcccgggctggacatgctcgagaagaac
atcatgatctccccggaggttctgtgtcgtgagggcatcaaggtgtaccgcacggtgcag
cgctgcggggagttcgtggtctgcttccccggggccttcgtgtccaaggtgtgctgcggc
tacaacgtgtcggagacggtgcacttcgccacgccgcactggatggacctgggctaccag
gccgccaaggacctgaaatgccgtcgcatcgcgaagcccttctccatggagaagctgctg
taccagatcgcctcggcagagtccaagagggacaacggcctcctgctcaacaccatcgct
gccctactcaaagacctcaggaacatggagatgcgccagcgggaggagctgttccaggcg
ggcctgctgtcgtcggcgcgctacgggacccacgacggcagcctggggcccaccgagagc
cgcaagaagccgcgcgggaagtggctaccactggagtcctccgagagacgctgtcagacc
tgcctgcacctctgctacctgtccatggtggtccaggagacggacaacgtggtcttctgt
ctggagtgtgccctgcgctacgtggacaagcacaagtcctgcagaggcctcaagatgatg
taccgatacgacgaggagcaaatcaacagcttggtgaaccaggtgtgcggcaaggccctg
gggaagagcagtggaggcgtgggggtcggtggagcaggcgggggtggaggaggaggaggc
gggctgttggtggtggggggagacctccgccacagccccagccagggggtcaaagcctct
ccggccaagcgggggcctcgcaagcgtgccacggtggaggtgtccctctctcgcctcagc
tctgcccacatgcccaaggcggcggcggccgtgtcctga
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