KEGG   Gadus morhua (Atlantic cod): 115535972
Entry
115535972         CDS       T10832                                 
Symbol
jarid2
Name
(RefSeq) protein Jumonji
  KO
K11478  protein Jumonji
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    115535972 (jarid2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gmh03036]
    115535972 (jarid2)
Chromosome and associated proteins [BR:gmh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115535972 (jarid2)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.2
     115535972 (jarid2)
SSDB
Motif
Pfam: JmjC ARID JmjN zf-C5HC2
Other DBs
NCBI-GeneID: 115535972
NCBI-ProteinID: XP_030203459
LinkDB
Position
22:complement(7532493..7639931)
AA seq 1552 aa
MMSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKSAQKRQMDGDGTTNPDGS
LTNGQLNGSGSKGGHKEERSKSLDGSNKYSEDGPAKKRPRLQAQRKFAQSQPNSPSTTPV
KVATEGGSAPASLPLAPPPSSSSSSSLSSLSSLCLSSCASASASTAVSSAPASAPASAST
STSTASAAASIQELTRRKPKTEDFLTFLCLRGSPALPSHMAYFGSSQDEEDLEDNCGETR
EEPVRKSHYHGNGPYASYTSSSSCQSTPRKGKTPGRQPLNGHVFNGHGKAGTRESPRGPK
AGSVRREPIRPPPPPPPPPLLRERSERAEAREQTREQHAREQQALASARSANGLLARGRA
AEELRKQASRVNGLTRGSTAGAKKGRDFRLPARTVKKYTATVSKGHVTYTKAKQRDLGKK
TKQLSSSKHSNGSGAAAHNHSHNQHSQPAAGPPPAHSGRAAPAAAAAASTAPAHHSNAKT
RKQVLMSNGGLLHKVAAGTRLNGRLNGQRHNYQAQAQAQADSQGREGREGREGREGLRHS
KRRLESSGGGGGGGGGEAKRSGAVAATTATTAALAEAKKAKLQAPPLETRSNSSTGRKAG
LQEKAAAPLAPVTNGHAPEPTAATAPSAPVALPSTPPPRQSPPPSSPAASTEPINTRPKR
ASAGKLMLIRQAQQQQQSRSHARSASSSSSSSSSSSSSSSSSSSSSSSPAPGHNPGRAGT
TSDPQHPAAAASPSLSTSSPSSSRTGLHAGPPGPGDREREWEREKELSRQQEGEPDRERR
RSRPEGWPSLSAAPVLRPGSQEFQDPLVYLAAVRERAEGAGLCRVVPPHDWRPECKLSEE
MRFVTQVQRVHKLGRRWGPNVQRLACIRKHLKAQGIRMDETPVIGGCEVDLARFFQLIND
MGGMQQVMDLKKWNKLADLLRIPRSAQDRLAKLQEAYLQYLLSYDSLGAPERLRLHAQVL
REKRKLEARRGPLEAHADPLLAGPGGGLVLLPRYEPKNGLACGLVAGAAGAGHRRGGGGA
AAAACRRLQELEAQVKAGRRRLFTQEQQSGREEEEEEEEALCGEEEEEEDEEEEEEEEEE
DAGVLSDQHKCIYKGKSMSLTNFFRIARNTMTMCFNKDPGEAEVEQEYWRIVEQRDCHVA
VHHGKVDTSTHGSGFPTGKSEPFSKHGWNLTVLPNNSGSILRHLGAVPGVTIPWLNIGMV
FTTSCWSRDQNRLPYIDYLHTGADCIWYSVPAEDKANLDKVVHTLLQANGTPGLDMLEKN
IMISPEVLCREGIKVYRTVQRCGEFVVCFPGAFVSKVCCGYNVSETVHFATPHWMDLGYQ
AAKDLKCRRIAKPFSMEKLLYQIASAESKRDNGLLLNTIAALLKDLRNMEMRQREELFQA
GLLSSARYGTHDGSLGPTESRKKPRGKWLPLESSERRCQTCLHLCYLSMVVQETDNVVFC
LECALRYVDKHKSCRGLKMMYRYDEEQINSLVNQVCGKALGKSSGGVGVGGAGGGGGGGG
GLLVVGGDLRHSPSQGVKASPAKRGPRKRATVEVSLSRLSSAHMPKAAAAVS
NT seq 4659 nt   +upstreamnt  +downstreamnt
atgatgagcaaagaacgacctaagaggaacatcattcaaaagaaatacgatgacagtgat
ggaatcccgtggtcagaggagcgggtggtgcgcaaggtgctgtacctctccctcaaggag
ttcaagagcgcgcagaagcggcagatggatggggacggaaccacaaaccccgacggttcc
ttgacaaatggacagctgaacggctcggggtcaaagggcggccacaaggaagagcgctcc
aagagcctggatgggagcaacaagtactcagaggacggccccgcgaagaagaggcctcgg
ctccaggctcagaggaagttcgcccagtcccagcccaactcccccagcaccacgcccgtc
aaggtggccaccgaggggggctcggcgccggccagcctgccgctcgccccgcccccttcc
tcctcctcctcatcctccctctcctccctgtcctcgctctgcctctcctcctgcgcctcg
gcctcggcctccaccgccgtctcctccgcccccgcctcggccccggcctccgcctccacc
tccacctccacggcctccgccgccgcctccatccaggagctgacccggcgcaagcccaag
acggaggacttcctcacgttcctctgcctgagaggctccccggccctgcccagccacatg
gcctacttcggcagctctcaggacgaggaggacctggaggacaactgcggggagacgcgg
gaggagcccgtcaggaagagccattaccacggcaacggcccctacgcctcctacacctcc
tcctcctcctgccagtccaccccgcgcaagggcaagaccccgggcagacagcccctcaac
ggacacgtgttcaacgggcacgggaaggcgggcaccagggagagcccgcgggggcccaag
gccgggtccgtccgccgcgagccgatacgcccgcccccccctccgccgccgccccccctg
ctgagggagcgcagcgagcgggccgaggcgcgggagcagacccgggagcagcacgcccgg
gagcagcaggccctggccagcgcccggagtgccaacgggctgttggcccgggggcgggcc
gccgaggagctccgcaagcaggcctccagagtgaacgggctgacgcgaggctccacggcg
ggcgccaagaaggggcgggacttccggctgccagcccgaactgtgaagaagtacacggcc
accgtgtccaagggccacgtcacctacaccaaagccaagcagagggacctgggcaagaaa
accaaacagctcagcagcagcaaacacagcaacggcagtggggccgctgcccacaatcac
agccacaatcagcacagccagccagcagccggccccccgccggcccactcagggagagcc
gcaccggcggcggcggcggcggcgtccacagcgccggcccaccacagcaatgcaaaaacc
cgcaaacaggtgctaatgtccaacggggggctgctgcacaaggtggccgcgggcacccgc
cttaacggccgcctcaacgggcagcgccacaactaccaggcccaggctcaggcgcaggcc
gacagccagggccgggagggccgcgagggacgcgagggccgggagggcctgcgccactcc
aagaggcggctggagtcgtcgggcggcggcggcggcggcggcggcggcgaggccaagagg
tccggcgcagtcgccgcgacgaccgccaccaccgccgccctcgccgaggccaagaaggcc
aagctccaggcccctcccctggagacgcgtagcaacagcagcacgggccggaaggcgggc
ctgcaggagaaggccgccgccccgttggcgccggtgaccaacggacacgcccccgagccc
accgccgccacggcgccctccgccccggtcgccctgccctccacgccccctccccgacag
agcccgcccccctcctcaccagcagccagcacggagccaatcaacacgcggcccaagcgg
gcgtcggcgggcaagctgatgttgatccgacaagcacagcagcagcagcagagcaggtct
cacgctcgcagcgcctcctcctcctcctcctcctcgtcctcctcctcttcctcgtcgtcc
tcgtcctcgtcctcttcctcctcccccgccccgggccacaacccggggcgcgccggcact
acctcagacccccagcacccggcggcggccgcctccccctccctctccacctcctccccc
tcctcctcccggacgggcctgcacgccggcccccccggcccgggggaccgcgagcgggag
tgggagcgggagaaggagctctcccggcagcaggagggcgagccggaccgggagcgccgg
cggagccgccccgagggctggccgtcgctgagcgcggcgcccgtcctccggccgggctcg
caggagttccaggaccccctggtgtacctggcggcggtgcgggagcgggcggagggcgcg
gggctgtgccgcgtggtgcccccccacgactggcggcccgagtgcaagctgagcgaggag
atgcgcttcgtgacgcaggtgcagcgcgtccacaagctgggccggcgctgggggcccaac
gtgcagcgcctggcctgcatccgcaagcacctcaaggcccagggcatccgcatggacgag
acccccgtcatcggcggctgcgaggtggacctggcccgcttcttccagctgatcaacgac
atgggtggcatgcagcaggtcatggacctgaagaagtggaacaagctggccgacctgctg
cgcatcccgcgctcggcccaggaccggctggccaagctgcaggaggcctacctgcagtac
ctgctctcctacgactcgctgggcgcgcccgagcgcctgcggctgcacgcgcaggtgctg
cgcgagaagcgcaagctggaggcgcgccggggccccctggaggcccacgccgaccccctg
ctggcggggcccggcgggggcctggtgctgctgccgcgctacgagcccaagaacgggctg
gcgtgcgggctggtggcaggcgcggccggggcggggcaccggcgcggcggcggcggggcg
gcggcggcggcctgtcgtcgactgcaggagctggaggcgcaggtgaaggcgggacggcgc
cggctcttcactcaggaacagcagagcgggcgggaggaggaggaggaagaggaggaggcc
ctgtgtggggaagaggaggaggaggaggatgaagaggaggaggaggaggaggaggaagag
gatgcaggtgttctcagcgaccagcacaagtgtatttacaaggggaaatctatgtctctg
accaacttcttcaggatagctcggaacaccatgaccatgtgctttaacaaggaccccggg
gaggccgaggtggagcaagagtactggaggatcgtggagcagagggactgccacgtggca
gtgcatcatgggaaggtggacaccagtactcacgggagtggattcccaacggggaaatca
gagccattttcaaaacacgggtggaacctcaccgtccttcctaacaactctggatccatt
ctgaggcatctgggtgctgtacccggggtgaccattccctggctgaacattggcatggtc
tttactacctcatgctggtctcgagaccaaaaccgccttccatacatagattacctacac
actggtgctgactgcatttggtattctgtccctgcggaggacaaggccaacctggacaag
gtggtccacacgctgctccaggccaacggcacgcccgggctggacatgctcgagaagaac
atcatgatctccccggaggttctgtgtcgtgagggcatcaaggtgtaccgcacggtgcag
cgctgcggggagttcgtggtctgcttccccggggccttcgtgtccaaggtgtgctgcggc
tacaacgtgtcggagacggtgcacttcgccacgccgcactggatggacctgggctaccag
gccgccaaggacctgaaatgccgtcgcatcgcgaagcccttctccatggagaagctgctg
taccagatcgcctcggcagagtccaagagggacaacggcctcctgctcaacaccatcgct
gccctactcaaagacctcaggaacatggagatgcgccagcgggaggagctgttccaggcg
ggcctgctgtcgtcggcgcgctacgggacccacgacggcagcctggggcccaccgagagc
cgcaagaagccgcgcgggaagtggctaccactggagtcctccgagagacgctgtcagacc
tgcctgcacctctgctacctgtccatggtggtccaggagacggacaacgtggtcttctgt
ctggagtgtgccctgcgctacgtggacaagcacaagtcctgcagaggcctcaagatgatg
taccgatacgacgaggagcaaatcaacagcttggtgaaccaggtgtgcggcaaggccctg
gggaagagcagtggaggcgtgggggtcggtggagcaggcgggggtggaggaggaggaggc
gggctgttggtggtggggggagacctccgccacagccccagccagggggtcaaagcctct
ccggccaagcgggggcctcgcaagcgtgccacggtggaggtgtccctctctcgcctcagc
tctgcccacatgcccaaggcggcggcggccgtgtcctga

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