Gadus morhua (Atlantic cod): 115535995
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Entry
115535995 CDS
T10832
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmh01009
]
115535995 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmh03021
]
115535995 (ctdp1)
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
115535995 (ctdp1)
Protein phosphatases and associated proteins [BR:
gmh01009
]
HAD phosphatases
Fcp/Scp phosphatases
115535995 (ctdp1)
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115535995 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
Biotin_lipoyl
BRCT
Motif
Other DBs
NCBI-GeneID:
115535995
NCBI-ProteinID:
XP_030203510
Ensembl:
ENSGMOG00000000742
UniProt:
A0A8C5ADZ3
LinkDB
All DBs
Position
22:20509945..20566036
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AA seq
1057 aa
AA seq
DB search
MEDPADSGGGSAAEGPVVQVADIRWPIGALPLRLLEWKVKPGSLVNVDSVLALCAPISSA
VESGLKPQKHVNRLPEKKVKSDRAGVIRELCCQLGQVIPPGGIIVRIEECSHPIVMKGLC
AECGQDLTQLQGTNGNLQVPFSTATVSMVHSVPELMVSSEQAEQLGREDHTRLHRNRKLV
LMVDLDQTLIHTTEQHCPRMSNKGIFHFQLGRGDPMLHTRLRPHCKEFLEKIAKLYELHV
FTFGSRPYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLSNLFPCGDSMVCIIDDR
EDVWKFAPNLITVKKYIYFQGTGDINAPPGSREAKKASRPAESPEPTGTSGAEEQNNGFK
RRGRENANANTNTNVNNGGKEEPNALSSTQETPAETQRTHAPGEGKDEQEQDPEPGQQGE
SRLTQAEGTGKGTGVGVQGGSTGTTGSAEGDGPEQPSPAEAPAGNNLDFDLSSDSDGESV
TEKPPSSTADSVAGGDPKTSPSGVRDQQEAGLTQNPECGDGPEGDGGKRREEGDAVKGKV
EVVATAAEEEEEGKEADAAGNSATPAAEPPPVGPPGTEDLGNGCSDKREPETESQNSELS
GVTAGEELLEQSMEEEEEEEEEADPDQDDHLIYLEEVLQRIHAEYYARYEVYQRKEAPEM
PDVRRIVPELKGKVLEGATIVFSGLYPTNYPMERTREYYHAKVLGAKIGRGLVLNAEDPC
RTTHLIAARAGTEKVRQALGCKHLHITSPDWLWCCLERWEKVEEQLYPLKEEPSKTPRSN
SPAMLPDPQGMFHHPVFHPAHLHQGPPPPAPEVRIYDPVTGKLIRRGQHGQQPPPYLQAP
GSMSQPDHRNTAPPRVGQTSAASDDEQPGPSRRKRGPSMSDSMPLYMLCKEDLDSMDKEV
DDILGEESDNESEGQGKERPGEEEVENDDDEEDEDQQQQQHHQQLGAGASTGGEHTAPSL
AVAKHTGLQTPGKEACLTSSVQRGHKRKLDEAQEEERGEDEEDSKDEQGGASSSPSKQED
QPVDQDADNEDDEEEEGSSSEADEMAAALDLELNDFM
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccccgcggattctggcggcggctccgcggcagagggccccgtggtgcaggtg
gcagacatccgctggcccatcggagctctgcctctgcgtctgctagagtggaaagtcaaa
cccgggtctctcgtcaacgtggactcggtgctggccttatgtgctccgatctcctcggcg
gtagagagcggtctgaagccccagaaacatgtcaacaggctcccggagaagaaggtgaag
tcggaccgcgccggagtgatcagggagctttgctgtcagctcgggcaggtcataccccct
gggggtatcatcgtccgaattgaagaatgcagccatcctatagtgatgaaaggactttgt
gctgaatgtggacaggatttgacacagctccagggcactaatgggaatctgcaagtgccc
ttctccacggcaacggtctccatggtgcacagcgtgcctgagttgatggtcagctcagag
caagcagagcagctgggccgagaggaccacacgaggctgcaccgcaacagaaagctggtg
ctcatggtggacctggatcagacgctgatacacaccacagagcagcactgcccacgcatg
tccaacaaggggatcttccacttccagctgggtcgaggcgaccccatgctccacacacgg
ctgcgtccgcactgcaaggagttcctggagaagatagccaagctgtacgagctgcatgtg
ttcacgttcggaagccgtccctatgcacataccattgcaggttttttggaccctgaaaag
aaactcttttcccaccgcatcctctccagggacgaatgcatcgatcctttctccaagacg
gggaatctaagcaacctcttcccgtgcggggactccatggtgtgcatcatcgacgaccgc
gaggacgtgtggaagtttgcacccaacctcatcactgtgaagaagtacatctacttccaa
ggcaccggcgacatcaacgctccccccggctcccgcgaggctaagaaggcgagccggcct
gctgagagccctgaacccacggggacatcgggggctgaggagcagaacaacggcttcaaa
aggagagggagggagaacgccaacgccaacaccaacaccaacgtcaacaacggaggcaag
gaggagcccaacgcactttcatccactcaggaaacgccagcggaaacgcaaaggacacac
gcccccggggaggggaaggacgaacaggagcaggacccagagccggggcaacagggggag
tccaggctgacacaggcggagggtacagggaaggggacgggtgtcggcgtccagggggga
agcaccgggacaacgggctcggcggagggggacggccccgagcagccttccccggcggag
gcccccgcaggcaacaacctggactttgacctgtccagcgacagtgacggcgagtccgtc
acggagaagccccccagctcgacggcggatagcgtagccggcggcgaccccaagacgagt
ccgtcgggggttcgcgatcagcaggaggccggcctcacgcagaaccccgagtgtggggac
gggccggagggagacgggggtaaacggagggaggaaggagatgccgttaaagggaaggtt
gaagtcgtcgccaccgccgcagaagaagaagaagaaggtaaagaggcggacgctgcgggg
aacagcgcgacacccgcggcggagcctcctccggtgggccccccgggcaccgaggacctg
ggcaacggctgctcggacaagagggagccggagacggagtcccagaacagcgagctctcc
ggggttactgccggcgaggagctgctggagcagagcatggaggaggaagaggaggaggag
gaggaggcggaccccgaccaggacgaccacctcatctacctggaggaggtgctgcagagg
atccacgcagagtactacgcccgctacgaggtctaccagaggaaggaggccccggagatg
cccgacgtccggcggatcgtgccggagctgaagggcaaggtgctggagggggccaccatc
gtgttcagcggcctgtaccccaccaactaccccatggagaggactcgcgagtactaccac
gccaaggtgctcggggccaagatcggccggggcctggtgctcaacgccgaggacccctgt
cggaccacgcacctcatcgcagccagagccggcactgagaaagtacgtcaggcactgggc
tgcaaacacctccacatcaccagtcccgattggctgtggtgttgtctggagcgctgggag
aaagtcgaggagcagctgtaccctttgaaggaggaaccctccaagaccccccggagcaac
agcccggccatgctgcccgacccccaggggatgttccatcaccccgtcttccaccccgcc
cacctccaccaaggacccccgcccccggcccccgaggtgcgcatctacgacccggtgacg
gggaagctgatccggcggggccagcacggccagcagccgcccccctacctccaggccccg
gggtccatgtcgcagccggaccaccggaacacggccccccccagggttggtcagacgtca
gcggcgtccgatgacgagcagcccggcccgtccagaaggaagcgcgggcccagcatgtct
gactcgatgccgctctacatgctctgcaaggaggacctggacagcatggacaaagaggtg
gatgacatcctaggggaggagagcgacaacgagagtgaggggcaaggcaaggagaggcca
ggggaggaagaggtggagaatgatgatgatgaagaggatgaggatcagcagcagcagcag
catcatcagcagctaggagcgggggcgagcacgggcggagagcacactgctccgtcactg
gccgtcgccaagcacacgggactccagaccccaggcaaggaggcctgtttgacgagtagt
gtacaaaggggtcacaagcgcaagctggacgaggcccaggaggaggagcggggtgaggat
gaggaggacagtaaggatgagcagggcggggccagcagctcgccctccaaacaggaagac
caacccgtcgaccaggacgccgataacgaagacgacgaggaagaggagggcagcagctca
gaagcggacgagatggccgcggccttggacctcgaactaaacgacttcatgtga
DBGET
integrated database retrieval system
