Gadus morhua (Atlantic cod): 115536003
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Entry
115536003 CDS
T10832
Name
(RefSeq) uncharacterized protein LOC115536003
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04020
Calcium signaling pathway
gmh04080
Neuroactive ligand-receptor interaction
gmh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115536003
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115536003
04082 Neuroactive ligand signaling
115536003
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115536003
Ion channels [BR:
gmh04040
]
Ligand-gated channels
Glutamate (ionotropic)
115536003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
115536003
NCBI-ProteinID:
XP_030203520
LinkDB
All DBs
Position
22:280635..356224
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AA seq
1709 aa
AA seq
DB search
MVAPRPALSLLLAILACTGPARPSPPLLLRPRDRERDSGGVNIAVVHSGSSILPDTAVPG
GAGSGELGPGLGNGPGGGGAGRGVTGALTGGGVGGVAGVASASVALAALVGETVMTPSGQ
ANVIYLAVNESSPGSLLLQLCELLATTPLQGLVFEEERPPPPNRAPLAPLLEFVSAQTGV
PVVAVGGGASLGRESQESGSIYLQFTCSTSMQLDVIFEVLEEYDWTSFSVVTTRHHGYED
FLAMVEGLTDGSFIGWEKKSVVILNVTDDPGGARTKRLLKDNEAQVRLLYCSQEEAEQVF
RAAWAAGQAGPSHMWFAVGPALSGLGLEGLPKALFAIRPQGWRDEPRRRIAKGVSVLAHG
AMALRRDQGAGSRMHAGNCQTDGNQTHRVPDRISCPFLIFLILLISLAVFITQEHDDLFE
TSLSLSLSLSPVGSGGSKFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVI
FLASYTANLAAFMIQEEYIDTVSGLSDKKFQQPTEQYPPLRFGTVPNGSTEENIRSNYPN
MHQFMTRNNQKGVEEAIENLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTG
YGIALHKTSRWKRPLDLALLQLVGDDEIDMLERLWLSGICHNDKIEVMSSKLDIDNMAGV
FYMLLVAMGLSMLVFAWEHLVYWKLRHCMTRSGGMDFLLALSRGMYSCCRFEDETSPPGL
QGSLPLYHTVAPAGPQQHLVTATVTNTTAIAMVTQQQQPAQGQAYTLLPGSPPPPHSAVA
LGPSTSPLLEGPMPCSSFLPRHDRRLAVVDRWNRPKEKSGGGPGAPGGGVGIGGLAGGIT
ELQAPPPPLQHSLGPPWTLPGGGGGGPGVRAAAGDPGLDEYKRYYGPIDPEGLGPAAEPP
PGPGQQTPQANPRGGPKGLPRPPPPKAPPQPAPGHVISKPPPLLAASPQRRASSSSSFWR
RGSLGPPRRESSTGPLYENILPLGRRGGGRYPAREALGRRGQRPPPPLPLPVSLSSPTHT
PTTPSSPRRFSSSGSSASSSSSSSSSSSSSSSSRSRSRSSPSSCSSSYDSSLSFRYRAGD
RQADPAEDSDLLTEESGLLAAAAAAARRKARSRRTSSRSLPCSPPPPPPLPPRKPRPPRE
ELRGRADGQLAQLQEWWASWGERGRDRGPPPPPARQEKGRQKEREQERRRRRKGRKSKKR
EERERERERERKHRKAKRRKKKEARKRERKRAEQEAGQPEKREESYRKKSESSVRSYGWD
LPGEEPRGEEPRGEEGGDQGDGRSRERPYRRRDSKALPDASGKPTSSVKFWGAGTPALGA
PALGAPTLGAGPAAFLPPLPPLSKPRRSRGSDREGEEREGEKREGEKRALLGRGGRAGGG
EGGGGLHPKEGRSFQEWASEAEDDDSEDEGRRREERERDEVIGIYSDNEGSSGEFGKFER
YWEGHESRAVGGIGGGGWFFGTYPSRDKSGSVTSREDPSPRWGGGESGWVSGGGGGGGGD
GQGGGRPGEREDRSRGPGSHWPPPPLTPPPPRRYWSVDKLHPPAAPWVSSRSQEELFQHC
QSFGGAPRAQRLSSSSSRPERPQNPSRSGSRSDLAPRRVSRSGRGRRTSSPPPLLPDPPA
PLPALPAPPPSAAHAPPPSSSSVSSPSGVSFTPGAPQPASVASASAKLQYQRLRGGPPRR
PPSPRLPLEARSLCSRRGSAQFSSVESEV
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atggtggccccaaggcccgccctctcgctgctattggctatcctggcctgcaccgggccg
gcccggccctccccccccctgctactccgccctcgggaccgcgagagggattcgggcgga
gtcaacatcgccgtggtccactccggctcctccatcctcccggacacggcggtcccgggc
ggggccggctcaggggagctgggccccgggctgggtaacgggcccgggggggggggggcg
gggcggggggtcacgggggcgctgactggagggggcgtcggcggcgtggcgggcgtggcc
tcggccagcgtggcactggcggccctggtgggggagacggtgatgacaccgtcgggccag
gccaacgtcatctacctggcggtcaatgagagcagcccggggagcctgctgctgcagctg
tgtgagctgctggccaccacgcccctacagggattggtgttcgaggaggagaggccgccg
cccccaaaccgcgcccccctggcccccctgctggagtttgtctccgcccagacgggtgtt
cccgtggtagcggtggggggcggggccagcctggggagggagtcccaggagagcggttcc
atatatctgcagttcacctgctccacctccatgcagctggatgtgatcttcgaggtgctg
gaggagtacgactggacctccttctcggtggtcaccacgcgtcaccacggttacgaggac
ttcctggccatggtggaggggctgacggacggctccttcatcggctgggagaagaagagc
gtggtcatcctcaacgtgacggacgacccgggcggggcgcgcaccaagaggctgctgaag
gacaacgaggcccaggtgcgtctcctgtactgttcccaggaggaggccgagcaggtgttc
cgtgcagcctgggcagcgggtcaggcggggcccagccacatgtggttcgcggtgggccca
gccctgtccggcctgggcctggagggcctgcccaaggccctgttcgccatccggccgcag
ggttggagggacgagccccgcaggaggatcgctaagggcgtgtcggtgctggcccacggt
gccatggcgctccgtagggaccaaggcgccggcagccggatgcacgccggcaactgccag
acggacggcaaccagacgcacagggtccccgaccgcatcagctgccccttcctcatcttc
ctcatccttctcatctcactcgcagtcttcatcacccaagagcatgatgacctgtttgag
acctctctctctctctctctctctctctctcctgtagggtctggggggtcaaagttcacc
atcggtaagtccatctggctgctctgggcgctggtgttcaacaactcggttcctgtggag
aacccgcgaggaaccaccagcaagatcatggtgctggtttgggcgttcttcgctgtcatc
ttcctggcctcctacacggccaacctggcagccttcatgatccaggaggagtacatcgac
accgtgtccggactcagcgacaagaagttccagcagcccactgagcagtacccccccctg
aggttcggcacggtgcccaatggcagcacagaggagaacatccggtccaactaccccaac
atgcaccagttcatgacccgcaacaaccagaagggggtggaggaggccatcgagaacctc
aagaccgggaagctggatgccttcatctacgatgcggccgtgctcaactacatggcccgc
aaggacgagggctgcaaggtgatgaccatcggctcagggaaggtgttcgccacgacgggc
tacggcatcgcgctgcacaagacgtcccgctggaagagacccctagacctggccctgctg
cagctagtgggggacgatgagatcgacatgttggagcgactctggctgtcggggatctgc
cacaatgacaagatcgaggtgatgagcagtaagctggacatcgacaacatggcgggggtc
ttctacatgctgctggtggccatgggcctcagcatgctggtgttcgcctgggagcacctg
gtctactggaagctacggcactgcatgacccgctccggcggaatggacttcctcctggcg
ctgagccgggggatgtacagctgctgccgcttcgaggacgagacgtccccgcccgggctc
cagggctcgctgccactgtaccacaccgtggcccccgctggcccccagcagcacctcgtc
accgccaccgtcaccaacaccaccgccatcgccatggtgacgcagcagcagcagccggcg
cagggccaggcctataccctgctgccgggctccccgccccccccccactcggccgtggcc
ctggggccctccaccagccccctgctggagggccccatgccctgctcctccttcctgccc
cgccacgaccggcgcctggccgtggtggaccgctggaaccggcccaaggagaagagcggg
gggggccccggggcccccggggggggcgtcgggatcgggggcctcgccgggggcatcaca
gagcttcaggctccgcccccgccgctccaacacagcctgggcccgccctggaccctgcct
ggagggggagggggggggcccggggtccgggctgcagcgggggaccccgggctggacgag
tacaagcggtactacgggccaatcgaccccgagggcctggggcccgctgcggagcccccg
ccggggcccggccagcagaccccccaggccaacccgcgggggggccccaagggcctgccc
cgaccgccccctcccaaggcccccccgcaacccgcgccgggacatgtgatctccaagccc
ccccccctgctggcggcctccccccagcgcagggcctcctcctcctcctccttctggagg
aggggcagcctggggcccccccgcagggagagctccacggggccgctgtacgagaacatc
ctgcccctggggaggcgcgggggggggcgctaccccgccagggaggccctggggagacgg
ggccagagacccccgcctcctctcccgctgcccgtctccctctcctcccccacgcacacc
cccaccacgccctcctccccgcgccgcttctcctcctccggctccagcgcctcctcctcc
tcttcgtcctcctcttcgtcctcctcctcgtcctcgtcccgctcccgctcccgctcctcc
ccgtcctcctgctcctcctcctacgactcctccctgagcttccggtaccgcgccggggac
cgccaggccgacccggccgaggactcggacctcctcacggaggagtccggcctgctggcc
gccgccgccgccgccgcgcgcaggaaggcgcgctcccgccgcacctcgtcacgctcgctg
ccctgcagcccgccgccgccgccgccgctgccgccgcgcaagccccgccccccgagggag
gagctgagggggcgggccgacggccagctggcccagctgcaggagtggtgggccagctgg
ggggagcgggggcgggacaggggcccgccgccgccgccggcccgccaggagaagggccgg
cagaaggagcgcgagcaggagcgccggaggaggaggaaggggaggaagagcaagaagagg
gaggagcgggagcgggagagggagagggagcgcaagcaccgcaaggccaagaggaggaag
aagaaggaggccaggaagagggagaggaagagggcggagcaggaggcgggccagccggag
aagagggaggagtcctaccgcaagaagagcgagagctcggtccggagctacggctgggac
ctcccgggggaggagcccaggggggaggagcccaggggggaggaggggggagaccagggg
gacgggaggagcagggagcggccgtaccgccggagggacagcaaggccctccccgacgcc
agcggcaaacccacctcctccgtcaagttctggggcgccgggacccccgcgctgggggcc
cccgcgctgggggcccccacgctgggggccggcccggcggccttcctccccccgctgcct
cccctttccaagccccgcaggagtagaggctcggacagggagggggaggagagggagggg
gagaagagggagggggagaagagggctctgctcgggaggggcgggagagcaggagggggg
gaggggggaggggggctccatcccaaggaggggcggtccttccaggagtgggcgtcggag
gcggaggacgacgactctgaggacgaggggaggaggagggaggagagggagcgcgacgag
gtgatcgggatctactcggacaacgagggctcctcgggggagttcgggaagttcgagagg
tactgggagggccacgagagccgggcggtgggcggcatcgggggcgggggctggttcttc
ggcacgtacccctccagggacaagtccgggagcgtcacctccagggaggacccctccccg
cgctgggggggcggggagagcggctgggtgtcagggggaggagggggaggagggggagac
ggccaggggggaggccggcccggagaaagagaagatagaagtcggggtccaggatcgcac
tggcccccgccccccctcacgccgccgcccccccgccgctactggtccgtggacaagctc
caccccccggcggcgccctgggtctcctcccggagccaggaggagctgttccagcactgc
cagagcttcggcggcgcccccagggcccagcgcctctcctcctcttcctcccggcccgag
cgcccgcagaacccgtcccggtccggcagccggtccgacctggcgccccgccgggtgtcc
cggtcggggcgcggccggcggacctcctccccgccgccgctgctccccgacccgccggcc
cctctccccgcgctgccggcgccccctccctccgccgcccacgcccccccgccgtcgtcc
tcctcggtgtcctccccctcgggggtctccttcacccccggggccccccagcccgcctcc
gtggcctcagcgagtgccaagctgcagtaccagaggctgcgcggcgggcccccccggcgc
cccccgtcgccccgccttccgctggaggcccgcagcctgtgctcccggaggggctcggcc
cagttctccagcgtggagagcgaggtgtga
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