Gadus morhua (Atlantic cod): 115536197
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Entry
115536197 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115536197
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
115536197
NCBI-ProteinID:
XP_030203802
Ensembl:
ENSGMOG00000029028
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Position
22:7265058..7352726
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AA seq
835 aa
AA seq
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MKSNQERSNECLPPKKRELPASTLASEDRPLAAPPASDTQRSENLAWLASVAGGHESRHR
TPSESNGPQYKPLSMSDSSPSYSSSSYASPSPSPSSSSSSSSSLRLVSSLPALYTSPSVH
YAPMPHNLQFIASPNPSPYASYVTSQLLPPPSSSSSSSSSRGSLSHADAAPGSSQASKLS
EHQRASAACASMPPPSSDYHPVYGSSSSSSSSLRSAPPPSHHLAHLPPPPPPPPLHPHHK
LGHAISQLVVQYADAPTRREEGASARGSRELHNGEQERGGRRAASSLAKPGHKARGGAPA
CTSSPPSSSSSSSSPYEAHQLVLPTDYTTHDASVLRTSFMLMPNSHPDHXTPPPPPTHHH
HHHHAPQTPGPPERGGIGLGKPAHRAPSSSSSSSSSSANSSPASSFSFAPPPPPPPPDAL
KASVSALSPHTVIQTTHGPPELLSLGLPAPGLYSQPPIIGYIAGGGQQQQQQLLQQQLQQ
QQQQQHHHHHQQPISYHHASLQQHLLIPGSQPVIIPVSGGGVTTMESAASHATSAAAAAA
AASLSFAGALPPQTYLAAPKREPPELPEAPLFHQARLLPPPPPPPPTAAAAAASPSPAPS
PPSLPPYFVKGSIIQLADGDLKRVEELKTEDFIQSAEISSELKIDSSTVERIDQSPASRH
LAVVQFSVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPDRTTAALELPCARLSVGDVCISL
TLKNLRNGALKKSSSNTTSATTAAAASAAASTPSSGGGHGHLKPPRPAPDPPRCGGGGSK
RGERENGVRQQQTLIGGGGGGGAIVKTENGVEPRCGGEDGGSAAAGGGLEADQGP
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaggagcgcagcaacgaatgtctgccccccaagaagagggagctcccc
gccagcacgctggcctcggaggaccgccccctggccgcgcccccggccagcgacacccag
cgcagcgagaacctggcctggctggccagcgtggcgggggggcacgagagccggcaccgg
accccctccgagtccaacgggccccagtacaaaccgctctccatgtctgactcctccccc
tcctactcctcctcgtcctacgcctccccctccccctccccctcctcctcctcctcgtcc
tcttcgtcgctgaggctggtgtcgtcgctgcccgccctctacacctccccctcggtgcac
tacgcccccatgccccacaacctgcagttcatcgcctcgcctaacccctccccctacgcc
agctacgtcacctcccagctgctgcccccgccctcctcctcctcctcctcctcctcctcc
cggggctcgctctcccacgccgacgcggcccccggctcctctcaggcctccaaactctcg
gagcaccagcgggcctcggcggcgtgcgcctccatgccccccccctcctccgactaccac
ccggtgtacggctcctcctcctcctcctcctcctccctgcggtcggccccgcccccctcc
caccacctcgcccacctccccccgccgccgccgccgccgccgctgcacccgcaccacaag
ctgggccacgccatctcccagctggtggtgcagtacgccgacgcccccacccgccgggag
gagggggcgtcggcacgggggtcccgggagctccacaacggggagcaggagcgggggggg
cggcgggcggcgtccagcctggccaagccgggccacaaagcgcgggggggcgcgccggcg
tgcacgtcctcgccgccgtcgtcctcgtcgtcctcgtcctcgccctacgaggcgcaccag
ctggtcctgcccacggactacactacccacgatgcctctgtgctgcgcacctccttcatg
ctgatgcccaacagccacccggaccacnccacaccaccaccaccacccacacaccaccac
caccaccaccacgcgccgcagacccccggccccccggagcggggcggcatcgggctgggg
aagccggcgcaccgggcgccctcctcgtcctcgtcctcgtcctcgtcctcggccaactcc
tccccggcctcctccttctccttcgcgccgccgccgccgccgccgccgccggacgccctg
aaggcctccgtcagcgcgctgtcgccccacaccgtcatccagaccacgcacggccccccg
gagctgctgtccctggggctccccgccccggggctctactcccagcccccaatcatcggc
tacatcgcagggggggggcaacaacaacaacaacaactactgcaacaacaactacagcag
cagcagcagcagcagcaccatcaccatcatcagcagccaatcagctaccaccacgccagc
ctccagcagcacctgctgatccccggcagccaaccggtgatcatccccgtcagcgggggc
ggagtcaccaccatggagtcggcggcgtcgcacgccacctccgccgccgccgccgccgcc
gccgcctcgctgagcttcgccggcgcgctccccccgcagacgtacctggcggcccccaag
agggagcccccggagctgcccgaggcgccgctcttccaccaggcgcgcctcctcccgccg
ccgccgcccccgccccccacggcggcggcggcggcggcctccccctcgccggccccgtcg
ccgcccagcctgccgccctacttcgtgaagggctccatcatccagctggcggacggggac
ctgaagcgggtggaggagctgaagacggaggacttcatccagagcgccgagatcagcagc
gagctgaagatcgactcgtccaccgtggagcgcatcgaccagagccccgcctcgcgccac
ctggccgtggtgcagttctccgtgggcgagcaccgggcacaggtgagcgtggaggtgctg
gtggaataccccttcttcgtgttcggccagggctggtcgtcctgctgccccgaccgcacc
accgccgcgctggagctgccctgcgcccggctgtcggtgggcgacgtctgcatctccctc
accctcaagaacctgaggaacggggcgctgaagaagagctcctccaacaccacctccgcc
accaccgccgccgccgccagcgctgcagcctccaccccctcctccggcggcggccacgga
catctcaagcccccccggccggccccggaccccccgaggtgcggcggcggaggctccaag
cggggggagagggagaacggggtgaggcagcagcagaccctcataggaggaggaggagga
ggaggagccatcgttaaaaccgagaacggggtggagccccggtgcgggggggaggacggg
gggtccgcggcggccggggggggtcttgaagccgaccaggggccgtaa
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