Gadus morhua (Atlantic cod): 115536265
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Entry
115536265 CDS
T10832
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
gmh00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
gmh01100
Metabolic pathways
Module
gmh_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
Enzymes [BR:
gmh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
115536265
Glycosyltransferases [BR:
gmh01003
]
O-Glycan biosynthesis
Glycosaminoglycan
115536265
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115536265
NCBI-ProteinID:
XP_030203898
Ensembl:
ENSGMOG00000004836
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Position
2:24692606..24731965
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AA seq
958 aa
AA seq
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MVGNPCARKLARRSKSALIAALSVLLIQTLIVWNFSTLDSSEDGGKGADRSREKRDHRVG
GGGVNKAYSEYPRSGLLKRGSPQLQPGGKAAVARHNKVRVDDFPPRPDSNNNENSVPKDF
DTVDSNSNLGAGSKPQHAAAAAAAAAAGPNAKPRKVERKGAHLGRSANEVLKHPVAMAAA
AAQPVGGARRGLNHTGALRPATAVPGAGSVRDAADAGRHRKSSARSSVAAAAAAAGAEPQ
LQQQKKKKEAPQCEISGKEVISALSRAKSRECRQQIVDVYCRHKEGTLMPLQVPRYCPLE
AKTSVSVQWDEDLGQAAPAVPARVAFVLVVHGRASRQFQRLFKAIYHTSHYYYIHVDLRS
NYLHREVIALAEQYPNVLVTPWRMSTIWGGASLLTMYLRTMSDLLKMADWSWDFFINLSA
ADYPIRANDQLVAFLSKYRNMNFIKSHGRDNARFIRKQGLDRLFYECDTHMWRLGDRKIP
EGIGVDGGSDWFLLNRQFVDYVVNSQDDLVTSMKRFYSYTLLPAESFFHTVLENSVHCES
MVDNNLRLTNWNRKLGCKCQYKHIVDWCGCSPNDFKPSDLPRFQQASRPTFFARKFEASV
SQEVVGQLDSFLFGAYPPGTPALHAYWENVYEQATDGPGAPRDAALSYYHAFARMGLARA
AGSLQGDPNDQSCRYASSGHPLAVHLYFLSDQLQGYLVRQQATNLATGQPETLETWVTPR
GHFSLATPPGPANRLQDIQVGTDWDPKERLFRNWGGLLGPQDEPAAAQRWSRGAANLTAT
VVWVDPTNVIAATYDLLVEAGAEYTHYRPPLSGPLRPGLWTLRVLHHWSLLGATRFLVLP
LEFSGRKPLLQDDALRLHGGPPRNSYMEQSFHGLNPVLRLPVSLGAVEEAEANAALTGEP
LRRWADGLLAGRWGAADVCSAGPSSCPVLQRCGHAPWSALSPDPKSRLGPPDAAGHIR
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcaacccgtgtgctcgcaagctggcccggcgatccaagtctgcgctgatcgca
gcactgagcgtgctgctcatccagacgctcatcgtgtggaacttcagcaccctggactcg
agcgaggacggcgggaagggcgccgacaggagccgcgagaagagggaccatcgagtcggc
ggagggggggtcaacaaagcctacagcgagtacccccgcagcgggctcctgaagcggggc
tcgccgcagctgcagcctggggggaaggcggccgtcgctcggcacaacaaggtccgggtg
gacgacttccctccgcgcccggacagcaacaacaacgagaactcggtgcccaaagacttc
gacacggtggacagcaacagcaacctgggtgcgggctccaagccccagcacgccgccgcc
gccgccgccgccgccgccgcgggacccaacgccaagccgcgcaaggtcgagaggaagggc
gcccacctggggaggtcggccaatgaggtgctcaagcaccccgtcgccatggccgccgcc
gccgcccagcccgtaggcggggcgaggcggggcctgaaccacaccggcgccctccggccc
gccaccgctgtcccgggggcgggctccgtccgggacgcggcggacgccggccgccacagg
aagtcctcggcgcggtcgagcgtggcggcggcggcggcggcggcgggggcggagccacag
ctacagcagcagaagaagaagaaggaggcgccgcagtgcgagatcagcgggaaggaggtg
atctcggcgctgtcgcgcgccaagagccgcgagtgccggcagcagatcgtggacgtgtac
tgcaggcacaaggagggcaccctgatgccgctgcaggtgccccgctactgcccgctggaa
gctaagaccagcgtcagcgtgcagtgggacgaggacctgggccaggcggcccccgcggtg
ccggcccgggtggccttcgtgctggtggtccacggccgggcgtcccggcagttccagcgg
ctcttcaaggccatctaccacacctcccactactactacatccacgtggacctgcgatcc
aactacctccatagggaggtcatcgcccttgccgagcagtacccaaacgtcctggtgact
ccctggcgcatgtcaaccatctggggaggggccagcttattgacgatgtacctgcgcacc
atgagcgacctcctcaagatggccgactggtcatgggatttcttcatcaatctcagcgcg
gctgactacccaatcagggccaatgatcaactggtggctttcctttccaagtaccgcaac
atgaacttcatcaagtcccacggaagagacaacgcacgcttcatccgtaagcagggcctg
gaccggctcttctacgagtgcgacacccacatgtggcggcttggcgatcgcaagatccca
gaaggcattggggtggacgggggctccgattggttcctcctcaacaggcagttcgtggac
tacgtggtcaactcccaggacgacctggtcaccagcatgaagcgcttctactcatacaca
ctgctgcccgcggagtccttcttccacacggtgctggagaacagcgtccactgtgagtcc
atggtggacaacaacctgcggctcaccaactggaaccgcaagctgggctgcaagtgccag
tacaagcacatcgtggactggtgcggctgctcgcccaacgacttcaagccctccgacctg
ccccgcttccagcaggcctccaggcccaccttcttcgcccgtaagttcgaggcgtcggtg
agccaggaggtcgtgggccagctggactccttcctgttcggggcgtaccccccggggacg
ccggcgctccacgcctactgggagaacgtgtacgagcaggccaccgacgggcccggggcg
ccgcgcgacgccgccctcagctactaccacgccttcgcccgcatggggctggcccgggcc
gccggctccctgcagggggaccccaacgaccagagctgcaggtacgcgtcctcgggccac
ccgctggcggtccacctgtacttcctgtcggaccagctgcagggctacctggtgcgccag
caggccaccaacctggcaaccggccagccggagaccctggagacctgggtcacgcccagg
ggccacttcagcctggccacgccccccggccccgccaaccggctgcaggacatccaggtg
ggcaccgactgggaccccaaggagaggctgttccgtaactggggcgggctgctggggccc
caggacgagccggccgccgcccagcgctggtcgcggggcgcggccaacctgacggccacc
gtggtgtgggtggaccccaccaacgtcatcgccgcgacctacgacctcctggtggaggcg
ggggccgagtacacgcactaccggcccccgctgagcgggcccctgaggcccggcctctgg
acgctgcgcgtgctgcaccactggagcctgctgggggccacgcgcttcctggtgctgccc
ctggagttcagcggccgcaagcccctgctgcaagacgatgcgctgcgactccacgggggt
ccgccccgcaactcgtacatggagcagagcttccacgggctgaaccccgtgctgcggctg
cccgtcagcctgggcgccgtggaggaggcggaggccaacgcggcgctgacgggcgagccg
ctgcgccgctgggccgacggcctgctggccggccggtggggcgcggccgacgtgtgctcg
gccggccccagcagctgccccgtcctgcagcgctgcggccacgccccctggagcgccctg
tcgcctgaccccaagtcgcggctcggaccgcccgacgcagccggacacatccggtag
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