Gadus morhua (Atlantic cod): 115536287
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Entry
115536287 CDS
T10832
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115536287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115536287
03021 Transcription machinery [BR:
gmh03021
]
115536287
03036 Chromosome and associated proteins [BR:
gmh03036
]
115536287
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Helix-turn-helix
ARID
115536287
Transcription machinery [BR:
gmh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115536287
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115536287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
115536287
NCBI-ProteinID:
XP_030203939
Ensembl:
ENSGMOG00000023083
LinkDB
All DBs
Position
22:9725045..9771139
Genome browser
AA seq
2434 aa
AA seq
DB search
MAAQVASAATLNTSPPSELKKPDRDPQEESVPGEKQHENKEPGSDSGSPGQKELQDGSDA
GNSGGGGDSDMKNGNGNLPRVNNNSSNQNDTGGPEGNNHPGMGHHHSGPFPPPPYGYNQH
YSRAPFHQHGGQQSPGMAAASGPAVQPGSMMDSYPPNSHEHGYPNHYNNYSPFPNRTSYQ
GQGYGAMNSPRNNQPPAAGGQPGKQQPAGGTAAMAASYNNQRYNMGNQQPTSTPTLNQLL
TSPSSARSYQNYPQGDYNNQEGASKGPADMGSSQYGGGHPSWQQRSHHPPPMSPGNTGQP
LNRNQPPAAMDPAGKMRGQQYGGANPYSQQQQQQQQQQQQQQQQQGPPSGPGAQQGGPYP
GQGYGPAGPQRYPMGMQGRTPGAMAGMQYGQQMSAYGQQGPGAYGQQGQGYYGQHGPPSH
PGQQPGPYPSQAQGGSTGPYPQPGHPSQPPGQHGQPGAPYPQSQGPPQGPQPPYSQSQPG
QPPYTPPSQQQQPPAQPQQQQQQQQQPPTPQQQQQQGPGPQSQQGPQGQPGYPQREGPGQ
PPQQQQPQQQQQTPPQQQPQQQQQQGPSQQQREQQQQREQQQQQREQQQQREQQREQQQQ
REQQQQQQREQQREQQQQREQQQQPPQREQREPGGPSPQSQQPPGHSQQGQRSPYSQTPP
QQQQQSPFQRFPPPPQELSQDSFSSQSSAPPSNQPVASNKSSQEDSMQGRPSSLPDLSGS
IDDLPTGAESALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGLRGPSPSPVGSPAS
VTTSRTGPLSPAAVPGNQMPPRPPSVQSDGIMHSTMNQSAMGPERVYMRNPQMGPYGSPG
QPGSALSPRQSSGGQMHAGMGPYPQNNSMGNYGPQGAQYGPQGYPRQPGYSNMPNSNYPG
GPGIGGSMNPMPGQGGGAPYAGMPPGRMGPGQMGPRPYGPAGMGPNMGPGLPPQVASGMC
PPPGMNRKEGGPPMLHGPGNSIHTRPPGYPNMSQGMMGAGSPYGPGMNNMPGMMNQGGPG
PYPMGGNMVNNSPGMAPSPEFGMDKMNPGQKMNNKIDGPPKQETKKKSSSSTITNEKITR
LYELGPEPERKMWVDRFLAFAEEKAMGMNNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKN
KKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKVERGEDPPADFFNTDVKKNQAKVQ
PPSPAGSGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPIAGVRSSVNLQDPFAD
GGDPAFSRRNAMTPNSQGYQPGMGGPEMMGRMGPYEPNKDPFGGMRKAGEQFMTPGPGPN
SGMGEQYNRGPPGPLGNMQMGQRQQFAYGPGYDRRPEPGMGPESMGPGAPQPNLMPSGAD
AGMYSPSRPPQQQQRSVASPSPSTHEPYANQYPGQGAPPGGPYPNQQPGMYPQQQPNYKR
PVDGAYGPPAKRHEGEMYNVPYSGPQQPGPQPSGPQGQPDMYNQYGAYQGPGERRPPGPG
GQFPFGFGRERGPPSGGPNSQSPMPPQLMGSPMPSGPDGPQGPMWQGRNEMGYANYPNRQ
GAPVPGQGPGYHTMNRSEEMLPADQRMNHEGPWPGHVNQRQPPYGPGSSGPPMSRPLPSN
YQNSQNHIPQVSSPAPMPRMDIRTSPSKSPFMHSGTKMQKAGPPVPASHIGQAPVQSPLI
RRDVAFPPGSIEASQPHLKPRRRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILL
YDDNSISTFNLCQLPGFLELVVEYFRRCLIEIFGILKEYEVGDPGQRTLIDPAAAEDSCD
EDLPPTDTDNMDTDEEEEEEDEEDEEKEKPKEVEEEEEEKEKKSSSEVRVKQEVEEVCSQ
KDLQPSSEEEEEEVKEEKKDVEGMASTKDGGASVPETAAAAPETPALPSFDRPKQASKFD
KLPIKVVRKKNPLRGDRSARSGQRQSFDSGLIHWSIGGGDTTEHIQTHLESRVDLLHRPR
KRTPVAAQSRKTAVEEVTMTTVLTMDAAAPTATTTTTTETPQSKTASPRPSSEPPRDSEE
KFETMTTTTTTAAASPARPVVATIDDVLLARPASVPADQKDGGGKFLLGLQGRRHLKILE
DEPHSKDETPLSTLADWQDSLARRCVCVSNIVRSLSFIPGNDQEMSRHPGLLLLLGRLVL
LHHRHPERKQAPVTYEKEEEEDEGVSCERDEWWWDCLEALRENCLVTLANISGQLDLSLY
PESICLPLLDGLLHWAVCPSAEALDPFPTLGPHGSLSPQRLVLETLSKLSIQDNNVDLIL
ATPPFGRLERLYGALVRLVGERKVAVCREMAVVLLANLAQGDGLAARAIAVQKASVGNLL
GFLEDSLAATQYQQSQGPLHHMQGGGGGAAPFEPTSVDMMRRAARALHAMARVEENHAEF
TLYESRLLDISVSPLMNSLVSHVICDVLFLIGRL
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgccgccactctcaacactagcccgccatcggaactcaaa
aagccggatcgggacccgcaggaggagtcggtaccgggagagaaacaacatgaaaataag
gaaccgggatctgacagcggatcaccgggccagaaggagctgcaggacgggagcgatgct
ggaaattctgggggaggaggggattctgacatgaagaacgggaacgggaatttaccaagg
gtaaataataacagcagcaaccagaatgatacaggggggcccgaaggaaataaccatccc
gggatgggacaccaccactcgggcccctttcctccacctccttacggttacaaccagcac
tacagccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccggcagtgcaaccaggcagtatgatggactcttaccctcctaattcacacgag
cacggctacccaaaccattacaacaactacagcccattcccaaataggacttcttaccag
ggccaaggatacggggccatgaattccccgcgtaataaccagcctccggcggctgggggg
cagccaggcaagcaacagcccgcaggaggaaccgctgctatggctgcctcttacaataat
cagaggtataacatgggaaatcaacaacctacatctacaccaactttaaatcagctgctg
acctctccaagctctgcgaggagctatcaaaattaccctcaaggagactataacaatcag
gaaggggccagcaagggaccagcagatatgggaagcagtcagtatggtgggggccatccg
agttggcaacaaagaagccatcatcctcctcccatgagcccgggaaacactggacaacct
cttaaccgaaatcagcctccggctgccatggatccggcggggaagatgcggggccaacaa
tacggcggggccaatccctactcccaacaacaacagcagcaacaacaacagcagcagcag
caacagcagcagcaggggccaccgtcgggccccggggcccagcaaggtggcccctacccg
gggcagggttacgggccagcgggcccacagaggtaccccatggggatgcaggggcgcacc
cctggcgccatggctggcatgcagtacggacagcagatgtctgcctacggccagcagggt
cctggggcctacgggcagcagggccagggctactacggccagcacggccccccgtcgcac
ccgggccaacagcctggcccctaccccagccaggcccagggcggctccacgggcccctac
ccgcagccaggccacccctcgcagccgcctggtcagcacgggcagcctggagcgccctac
cctcagtcccagggcccgcctcagggtccccagcccccgtacagccaatcccagccgggc
cagccgccgtacacccctccatctcagcaacagcagcctccggcgcagcctcaacaacaa
caacaacaacaacaacaaccgccgaccccccaacaacaacagcagcagggtccaggtccc
cagagccagcaggggcctcagggccagcctggctacccccagagggaaggacccgggcag
cccccacaacaacaacaaccacaacagcagcaacaaacaccgccacaacaacagccacag
cagcaacaacaacaagggccttcgcagcaacagcgcgagcagcagcaacagcgcgagcag
cagcagcaacagcgtgaacagcagcaacagcgtgagcagcagcgcgaacaacaacaacag
cgggaacaacaacaacaacaacagcgggaacaacaacgtgaacaacaacaacagcgtgaa
caacaacaacaacctccgcagcgggagcagcgggagcctgggggtccgtctccccagtcc
cagcagcccccgggccactcgcagcagggccagcgctcgccctactcccagacgcccccc
cagcagcagcagcagtcccccttccagaggttcccgcctccaccacaggagctctcccag
gattcctttagctcgcagtccagtgcccccccctccaaccagcccgtggcctccaacaag
agcagccaggaggacagcatgcaagggcggccttccagtctgccggacctgtcgggctcc
atcgacgacctgcccacgggcgccgagagcgccctgagcccgggggtcagcacctcgggg
gtgtccagcagccagggagagcagagcaacccggcccagtcgcccttctccccgcacacc
tccccccacctgccgggcctccgggggccctcgccctcccccgtgggctcccccgccagc
gtcaccacctccaggaccgggcccctctcgccggccgccgtgccaggtaaccagatgccc
ccgcggccgcccagcgtgcagtcggacggcatcatgcactctaccatgaaccagtcggcc
atgggcccggagagggtgtacatgagaaacccccagatgggcccctacgggtcccccggt
cagcccggctccgccttatctccccgccagtcctccgggggccagatgcacgccggcatg
ggcccctatccccagaacaactccatgggcaactacggaccccagggggcccagtacggc
cctcaaggctacccgaggcagcccggctacagcaacatgcccaactccaactacccggga
ggccccggcatcggcggctccatgaaccccatgccgggccagggcggcggggcgccctac
gccggcatgccccccggccgcatgggccccgggcagatgggcccgcggccgtacggcccc
gccggcatgggccccaacatggggcccggcttgcccccccaggtggcctccgggatgtgt
ccgcccccgggcatgaacaggaaggagggcggcccccccatgctccacggccccggcaac
tccatacacaccaggccgcccggttaccccaacatgtcccagggcatgatgggcgcgggc
tccccgtatggcccgggcatgaacaacatgcccggcatgatgaaccaaggcggtccaggc
ccgtaccccatggggggcaacatggtcaacaactcccccggcatggcccccagtccagag
tttggcatggacaagatgaaccccggccagaagatgaacaacaaaattgacggccccccc
aagcaagaaactaaaaagaagtcgagctcgtccaccatcaccaacgagaagatcacccgc
ctgtacgagctgggccccgagccggagaggaagatgtgggtggaccgcttcctggccttc
gccgaggagaaggccatgggcatgaacaacctgcccgccgtgggccgcaagcccctggac
ctcttccgcctctacgtgtccgtcaaggagatcggggggctcacccaggtgaacaagaac
aagaagtggcgggagctggccaccaacctgaacgtgggcacgtcgagcagcgcggccagc
tcgctgaagaagcagtacatccagtgtctgtacgccttcgagtgcaaggtggagcgcgga
gaggacccgcccgccgacttcttcaacacggacgtcaagaagaaccaggccaaggtccag
ccccccagcccagccggctccgggtccctccaggggccccagaccccccagtccaccagt
agctccatggctgaggggggcgacctgaagcctcccaccccggcctccaccccccacagc
cagatgcctcccatcgcgggcgtcaggagcagcgtcaacctccaggaccccttcgccgac
ggcggtgacccggccttctcccggaggaacgccatgacccccaactcccagggctaccag
cccggcatgggcggccccgagatgatgggccgcatgggcccctacgagcccaacaaggac
cccttcggcggcatgaggaaagcgggagagcagttcatgacacccggcccggggcccaac
agcggcatgggggagcagtacaaccgcggccccccggggcccttgggcaacatgcagatg
ggccagaggcagcagtttgcctacggaccgggatacgaccgcaggccggagcccggcatg
ggccccgagagcatgggccccggagcgccccagcccaacctcatgccctcgggggccgac
gcaggcatgtactcgcccagccggcccccccagcagcagcagcggtcagtagcgtccccc
tcaccatcgacgcatgagccctatgctaaccagtaccccggccaaggagctccccctggt
ggcccctaccccaaccagcagccaggaatgtacccccagcagcagccgaactacaagcgt
cctgtggacggagcctacggccccccagccaagcgccacgagggcgagatgtacaacgtc
ccctacagcggcccccagcagccggggccccagccgtcgggcccccagggccagccagac
atgtacaaccagtacggcgcctaccagggccccggtgagcgccggccgcccggccccggg
ggccagttccccttcgggttcggccgagagcggggcccgccctctgggggccccaactcc
cagtcccccatgccgccccagttgatgggcagccccatgccttcggggccagacggcccc
caggggcccatgtggcagggccgcaacgagatgggctacgccaactaccccaaccggcag
ggggccccggtccccggccaggggcccggctaccacaccatgaaccgctcggaggagatg
ctgccggcggaccagcgcatgaaccacgaggggccctggcccggccacgtcaaccagagg
cagccgccgtacggccccggctcctcggggccccccatgtccaggcccctgccgtccaac
taccagaactcccagaaccacattccgcaggtctccagcccggcgcccatgccccgcatg
gacatccgcacgtcccccagcaagtccccttttatgcactcgggcaccaagatgcagaaa
gccggccctccggtgcccgcttcccatatcggccaggcccctgtgcagtcgcccctgatc
aggagggacgttgccttcccccctggctccatcgaggccagccagccccacctgaaaccc
cggaggagactgaccatgaaggacatcggcacgcccgaggcttggagggtgatgatgtcg
ctcaagtcgggtttgctagccgagagcacctgggccctggacaccattaacattctgctg
tacgacgacaacagcatttctactttcaacctctgccagctgcctggcttcctggagctg
gtggtggagtacttccggcgctgcctgatcgagatcttcggcatcctgaaggagtacgag
gtgggcgacccgggccagcgcacgctgatcgaccccgctgccgccgaggacagctgcgac
gaggacctgccccccaccgacacggacaacatggacacagacgaagaggaggaggaagag
gacgaggaggacgaggagaaggagaagcccaaggaggtggaggaggaggaggaggagaag
gagaagaagagctcctcggaggtccgggtgaagcaggaggtggaggaggtgtgctcgcag
aaagaccttcagccttcatcggaggaggaagaagaggaggtgaaggaggagaagaaggac
gttgaagggatggcctcgaccaaagacggaggagcctctgtaccggaaacggccgccgcc
gccccagaaaccccggccctgccctcgttcgaccggcccaagcaggccagcaagtttgac
aagctgcccatcaaggtggtgcgcaagaagaaccccctgcggggcgaccgctcggcccgc
tcgggccagcggcagagcttcgacagcggcctcatacactggagcatcggcggcggagac
accaccgaacacatccagacccacctggagagccgggtggatctgcttcaccggccgcgc
aagcggacgcccgtcgcggcgcagagcaggaagacggccgtcgaggaggtgaccatgacg
acggtcctgacgatggacgccgccgccccgacggcaacgacgacgacgacgacggaaacc
ccccagagcaagacggcctcgccccggccctcctcggagcccccccgcgactcggaagag
aagttcgagacgatgacgacgacgacgacgacggcggcggcgtccccggcccgccccgtc
gtggccaccatcgacgacgtgctgttggcgcggccggcctccgtgccggcggaccagaag
gacggcggcggcaagttcctgctgggcctgcagggccggcgtcacctgaagatcctggag
gacgagccgcacagcaaggacgagacgccgctcagcacgctggcggactggcaggactcg
ctggcgcgccgctgcgtctgcgtgtccaacatcgtgcgcagcctctccttcatcccgggc
aacgaccaggagatgtcccggcacccgggcctgctgctgctgctgggccgcctggtgctg
ctgcaccaccggcaccccgagcgcaagcaggcgcccgtcacctacgagaaggaggaggag
gaggacgagggcgtgagctgcgagcgcgacgagtggtggtgggactgcctggaggcgctg
cgggagaactgcctggtgacgctggccaacatctcgggccagctggacctctcgctctac
cccgagagcatctgcctgcccctgctggacggcctgctccactgggccgtgtgcccctcg
gccgaggccctggaccccttccccacgctggggccccacggctcgctgtcgccgcagcgg
ctggtgctggagaccctcagcaagctgagcatccaggacaacaacgtggacctcatcctg
gccacgccgcccttcggccggctggagaggctgtacggcgccctggtgcggctggtgggc
gagcgcaaggtggcggtgtgccgggagatggcggtggtgctgctggccaacctggcgcag
ggcgacgggctggcggcgcgcgccatcgccgtgcagaaggccagcgtgggcaacctgctg
ggcttcctggaggacagcctggcggccacgcagtaccagcagagccagggcccgctgcac
cacatgcagggcggcggcggtggggcggcgcccttcgagcccaccagcgtggacatgatg
cggcgggcagcgcgcgcgctgcacgccatggcccgcgtggaggagaaccacgccgagttc
accctgtacgagtcgcggctgctcgacatctcggtgtcgccgctcatgaactcgctggtg
tcgcacgtgatctgcgacgtactctttctgatcggccgcttatga
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integrated database retrieval system
