Gadus morhua (Atlantic cod): 115536371
Help
Entry
115536371 CDS
T10832
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04146
Peroxisome
Brite
Membrane trafficking [BR:
gmh04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
115536371 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115536371
NCBI-ProteinID:
XP_030204046
Ensembl:
ENSGMOG00000006887
LinkDB
All DBs
Position
22:21458351..21473881
Genome browser
AA seq
1265 aa
AA seq
DB search
MFVNQGIQPVTVVFNNAKNCFLHLPPNVISHLSLHENQALELSWGHGSPVFLSWTRSRRS
SKPEEHIVELCRQLGERLGLKEGEQGFLRPCQQVSSVHQVFVEPLSSDDWEILELHSAAL
EQQLLDQIRVVFKDAVFPVWVDQRTAVYIRIASLEPAVPHGRLERSSELVVSPKTRPGTG
SFLRTPPGSGQDPPPYRHPTSEPPPSSPQPPSPAQNQQWGGIGNLTGLMRYLFTGAVGPA
KETMPSVPELPALFSASLLRVCHQPPNALCTINPGAAAVVHLFPWNETVDTGCSILSQSA
VTYGLLSKIPTPKEARDGAKRATEPKKNAGALKVGEELAKEQQEEVEEGKELAVVRVVCH
HVEELQDDQNRGEIHSGRVWITQHLATSMKIDPHSTVRIQPVESTVTVASGVRLQPLEPL
PEESDDAIQTAFLDWLHSQSHEPLACLTARSSIILLHGPNAKLELALTVLQPEAESELPD
QLFLLAPAVLQKAGVQVDRGPPTADTTTKAVADAPYTELPLLGTLGGTEQLSKAGFQFMS
HSLLGSPLSRELGALGQGLHGGALLITGAKGSGKSAVSRALCRKAGEELDTYVEVVDCKK
LKGKRAETVRHSLEETFQVARWRQPSVVLLDDLDHVTGAATTAEHEHGPEALLRQHIAQS
LIDIVDDLVVRSSLVCLVVTSQTEHSLHPSLTDVQGSHFFQGFLHIQPPDQAQRAEILRR
LVLQKPCLSAHTADTLDLGAVAMETDGYLARDLALLLERAVHASAVREERSDQAGDGLCL
RWSHFEQAMKGFTPPSLWGVRLETPPGVGLDRVGGLKEVRQELMDTVLLPAKYPVLFSRL
PIRHRSGLLLYGAPGTGKTLLAGAAARDSGMNFISIKGPELLSKYIGASEQGVRDVFQRA
QAASPCILFFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVLAASSRPDMI
DPALLRPGRLDKSLYCPPPDVEDRVEILQALSGALALGPDVDLRQLAEATELFTGADLKA
LLYNAQLEALHAGPPPSPALQEPPACGSDSDGSLSSMIFLNNSSASEDSLGEAEPALSLD
QSMVFLEHSMLPAADPAQGSNAWRLYFGSSYESELGHASPSPPNSLCASGPGSTTQESSA
GALAREAAGSLPPACMPTLRGGFQELGPEELQRLLLDVGVVKGSYRRTDVSGRREECVRS
RSVSGGAGLMLSQAHLTSALAQTRPSLGSQDWQRFSRLYEAFGDPGARGARSPALFKPGQ
RVTLA
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcaatcaaggcattcagccagtcacagtggttttcaataatgcaaaaaactgc
ttccttcaccttcccccaaacgtgatatcccatctttccttgcatgagaaccaggctttg
gagttgtcctggggccatggatctccagtatttctcagctggaccaggagtaggcgctcc
tcaaagcctgaggagcatatcgtggagctgtgtcgccagttgggagagaggctgggcctg
aaagagggagagcagggcttcctgaggccctgtcagcaggtctcgtctgttcatcaggtt
tttgtggagcctctgtcgtccgatgactgggagattttggagctccacagcgcagccctg
gagcagcagctgttggaccagattagagtggtgttcaaggacgctgtgtttccagtgtgg
gttgaccagcgcaccgccgtctacatcagaatcgcgtcccttgaaccagcggtgcctcac
ggccgcctggagcggtcctctgagctagtcgtctccccgaagaccaggcccgggaccggc
agcttcctccgcactccgcccggatccggccaggacccgcctccctaccgccaccccacc
tctgaacccccgccctcctcaccgcagcccccgtcccccgctcagaaccagcagtggggc
ggcatcggcaacctgacgggcctcatgcgctacctcttcacgggcgccgtgggccccgct
aaggagacgatgccctctgttccggagctccccgcgctgttcagtgcctcgctcctccgg
gtgtgccatcagccccccaacgctctctgcactattaaccccggcgccgccgccgttgtc
catctgtttccctggaacgagaccgtggacaccggctgctccatcttatcccagtcggcc
gtcacctacggcctgctgtccaagatccccacccccaaggaggccagggacggcgccaag
agggccacggagcccaagaagaacgcaggtgcactgaaggttggagaggagttggcgaag
gagcagcaggaggaggtggaggaagggaaggagctggcggtggtgcgcgtggtgtgccac
catgtggaggagctgcaggatgaccagaaccgtggagagatccattctggacgggtctgg
attacgcagcacttggcaacgagcatgaaaatcgatccccactcaacggtgcgaattcag
ccagtggaatctacggttacggtagcctcgggcgtccgcctgcagcctctagaaccactg
cctgaggagagcgatgatgccatccagactgccttcctcgattggctgcattctcagagc
cacgagcccctcgcctgtctcaccgcccgctccagcatcatcctacttcatgggcccaat
gctaaactggagctggccttgactgtgctgcagccggaggcagagagtgagctccccgac
cagctcttcctgctggccccagctgtcctccagaaggccggagtacaggtcgaccgaggg
ccgccaacggcagacacgaccacgaaggcggtggctgacgccccgtacacggagctcccc
ctcctgggcactctcggtgggacagagcagctgagcaaggcgggcttccagttcatgtcc
cacagcctgctgggaagccccctctcccgggagctgggggccctcggacagggactgcac
ggcggggccctgctcatcaccggggccaaggggagtgggaagagcgctgtgtccagagct
ctgtgcaggaaggctggtgaggagctggacacgtacgtggaggtggtggactgcaagaag
ctgaaagggaaaagggccgaaacggtgcgacactccctggaggaaacattccaagtggcc
cggtggaggcagccctcggtggtcctgctggacgacctcgatcatgtgacgggggccgcg
accacggcggaacatgagcacggcccggaggccctcctacgacagcacatcgctcagagt
ctgatagacatagtggatgacttggtggtacgatccagcctggtgtgtctcgtggtcacc
agccagacggagcactctctccacccctccctcactgacgtgcagggctcacacttcttc
cagggattcctgcacatccaaccccccgaccaggcccagcgagcggagatcctgcggcgc
ctcgtcctccagaagccctgcctatcggcgcacacggcggacacgctggacctgggggcc
gtcgccatggagacggacggctacctggcccgcgacctggcgctgctgctagagcgggcc
gtgcacgccagcgctgtgcgggaggagcgcagcgaccaggcaggcgatggtctgtgcctg
agatggagtcactttgagcaggccatgaagggcttcaccccgccgtccctgtggggggtg
aggctggagaccccccccggggtggggctggaccgggtggggggcctgaaggaggtgcgg
caggagctcatggacaccgtcctgcttcctgctaagtaccccgtcctgttctccagactc
cccatccgccaccgctcagggctcctgctgtacggggcccccggcacggggaagaccctg
ctggccggcgccgcggcccgggacagcggcatgaacttcatcagcatcaaggggccagag
ctgctcagcaagtatattggagccagtgagcagggggtccgcgacgtcttccagagggcc
caggccgcctcgccctgcatcctgttcttcgatgagtttgactcactggccccccggcgg
ggccacgacagcacgggggtgactgaccgcgtggtcaaccagctcctgacccagctggac
ggggtggaggggctgcagggagtctatgtgcttgcggccagcagtcgcccagacatgatt
gaccctgccctgctcagaccagggcgtctggacaagtccctgtactgccctccgcctgac
gtggaggaccgcgtggagatcctgcaggcgctgagcggggccctggcgctgggccccgac
gtggacctgcggcagctggccgaggccaccgagctcttcaccggggccgacctcaaggcc
ctgctgtacaacgcccagctggaggccctgcacgccgggccccccccgtcccccgccctg
caggagccgccggcctgcggctcggacagcgacggcagcctgtcctccatgatcttcctg
aacaacagcagtgcctcggaggactctctgggcgaggcggagccggcgctgtccctggac
cagtccatggtgtttctggagcacagcatgctgccggccgccgaccccgcgcagggcagc
aacgcctggaggctgtacttcggcagctcctacgagtccgagttgggacacgcctctccc
tcgccgccgaactccctgtgcgcatcgggccccgggtccaccacccaggagtcgagcgcg
ggggccttggcccgcgaggcggccggcagcctccccccagcctgcatgcccaccctgcgg
gggggcttccaggagctgggcccggaggagctgcagcgcctcctgctggacgtcggcgtg
gtgaagggcagctacaggaggaccgacgtgagcggacgacgggaggagtgcgtccgcagc
cgctcggtgtccgggggggccggcctgatgctgagccaggcccacctgacctccgccctg
gcccagaccagaccctccctgggctcccaggactggcagcgcttcagccgactgtacgag
gcgttcggtgacccaggggcccgcggggcccggagcccggccctgttcaaacccggacag
cgggtcacactggcctga
DBGET
integrated database retrieval system
