Gadus morhua (Atlantic cod): 115536862
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Entry
115536862 CDS
T10832
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115536862 (scrib)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
PDZ_6
LRR_14
LRR_4
PDZ_2
LRR_13
LRR_LRWD1
LRR_9
AbLIM_anchor
Motif
Other DBs
NCBI-GeneID:
115536862
NCBI-ProteinID:
XP_030204146
Ensembl:
ENSGMOG00000006464
LinkDB
All DBs
Position
23:complement(9900937..9975609)
Genome browser
AA seq
2056 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLQTVPDEIFRYSRSLEELLLDSNQLKELPKPFFRLLN
LRKLGLSDNAIQKLPPEVANFMQLVELDISRNDIPEIPESIKFCKALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNKLEELPDTLGALPNLRELWLDRNQLSSLPVELGNLRRLVCLDVSENRLEELPAELS
GLLALTDLLLTHNLLDAVPDSIGCLRQLSILKVDQNRLTELTDSIGECENLTELVLTENL
LQALPRSLGKLKKLTNLNVDRNRLGSVPSELGLCSSLNVLALRDNRLSRLPAELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTEDDEQTGEKVLTCYLLPQQP
SPSLENLLQNSVEDTWTDSNLNRVSVIQFQEETKGEEEEDDEAAAERRGLHRRATPHPSE
LKVMKKVIEERRNEAYSSRPDGEPDSPDHQGKRLSDLSNQSQESQASNSTVSANSHEERR
GLTTQGEELADGHAYQEDLDEMEVEYIEPTVHFAEEPITCGGGERDDDDDEEEEEGDRSD
EEGERRPAAAEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFTPESLLPPPPRPHQE
SRPQEEEEEEPEEGEGEGEGGPVTPEREKHHRPQEAQLEDSRLQVNTSQAKGVSFDQVNN
LLIEPARIEEEEHTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGV
KVGDKLLEVNAVDLQGAEHHTAVEALRSSGAAVSMSILREHMVEPENAITTTPLRPEGDH
FPRERRSSGLPFLVEPVPAPPRTRLSACLVRNDKGLGFSIAGGRGSTPYRTADTGIYISR
IAEGGAASRDSTLRVGDRVLSINGVDMTEARHDQAVALLTGTSPTIALVVERDQTAPGGS
PGLSRGRAHSPPPPEPSDSPDNEDPTEDGLSPQGNHLNRLEDEYPIEEVILVKSGGPLGL
SIVGGSDHASHPFGINEPGVFISKVIPEGLACQSGLRVGDRILEVNTMDMRHATHQEAVR
ALLANKQEIRLLVRRDPSPPGMEEIVIQKQPGEKLGITIRGGAKGHAGNPFDATDEGIFI
SKVNSSGAAARDGRLQVGMRILEVSNHSLLGMTHTEAVRVLRAVGDTLVMLVCDGFDPQT
VAGVEASPGIIANPFVTGIVRKNSLESISSIDRDLSPEEIDIMEKESEMVRETSQWEREE
MEKVERMRLEREEATRLLEEETENVGAGPLKLDYKTLAALPTTSLQKVNRFSPPLSRSDP
MEAVVQAQCLPSLEPLGFGLGHPSETLYPTDPQDTPLYPSDPHAASLCPTDPQALPGMTQ
ENSLLHASPPSPDVTSFSQSDATISLASTGTSLNGEEDEDECLVETQSICFSENPFLVAN
RRGKGRPPAERILSGPPVGYGRGGKLQPWMYTKTSSSDLPRTASPVRDGSYSPSIQPANV
HYSSPGPTARDSSPSSTRPGAIQPAGRVWSTPSPATPDASSPNPFQHGPSPINSQTSPRG
PSPVSHGDFPMNIKQAYKAFAAVPHAPATLEPPQDLYGGRNHVQQASSPESARFSEVFED
AVDGGEGGGGARSPCPPDHRDYQSMAAVPRFSRPSMVPQTPSPGGPDTPEQRSFRDRQKY
FEIDVKQTTPDKPKPRVSLVGADDLKKMREEEERRFEQRAREYLMDDEDDDDDDDLAHMK
ATGKVLLDGVEYRVEPLATTTRLPSTPGYNATSPGYASTPPGYASTPPGYASTPPGYAST
PPGYTSTSPGYTSTPPGYYSGSGASSVDGKGESQRNSLEDGFRLDQRPTSMTGLVPAYTA
EPAVAPVRTAKAERRHQERLRLQSPELAAAAPDQDLSPAEKRALEAEKRAMWRAARMKSL
EQDALKAQMVIAKSKEGKKRGTLDQLTESPSPAPTPSPTPMEELIPRGVTSPGRLSVSSK
KFDYRQFAAIPSSKPVYDIQSPDLVDEPCFIDDGTSSPVAAVNPEEADAGPEEVSLYSNK
RKLRQGRHSLEAAVPT
NT seq
6171 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccctttgtggcggtgtaaccgccacgtcgagtcggtggacaagcgg
cattgtagcctgcagactgtccccgacgagatattccgttacagccgcagcctagaagag
cttctcctcgattcaaaccaactaaaagaactacccaagccgttcttccggctgctgaac
ctccggaagcttggcctgagcgacaatgccatccagaagcttcctccagaggtggccaac
ttcatgcagctggtggagctggacatctccagaaacgacattcctgaaatcccagagagc
atcaagttctgtaaggccttggagattgctgacttcagtgggaatcccctttccagatta
ccagatggattcacacagctgcgagcgctggctcacctggcactcaacgacgtttcgtta
cagacgctgcccaacgacatcggaaatctggccaacctggtgacgctggagctcagggag
aacctactgaagtcccttcccacgtctttgtccttcctggtgaaacttgagcaactggac
ctgggatctaataagcttgaagagctgccggacaccctgggagctctgccaaacctgagg
gagctgtggctggacaggaaccaactgtcttccctccccgtggagctgggtaacctccgg
cggctggtgtgtctggacgtgtcggagaaccgtctggaggagctccctgctgagctgagc
ggtctgctggccctgacggacctgctgctcacacacaacctgctggacgcggtgcccgac
tccatcggctgcctgcggcagctgtccatcctgaaagtggaccaaaaccgcctgacggag
ctcactgactccatcggagaatgcgagaacctgacagaactggtgctgacggagaacctc
ctgcaggcactgcctcggtcgctgggcaagctgaagaaactgaccaacctgaatgtggac
cgcaaccggctgggcagcgtccccagcgagctgggcctgtgctccagcctcaacgtgctg
gccctcagggacaaccggctcagccggctgcccgcagagctggccgacgccacagagctc
cacgtgctggacgtggcagggaacaggttacagaacctgcccttcgcgctgaccaacctg
aacctgaaggccatgtggctggcggagaaccagtcccagcccatgctcaagttccagacg
gaggacgacgagcagaccggggagaaggtgctcacctgctacctgctgccccagcagccc
tcccccagcctggagaacctgctccagaacagcgtggaggacacgtggacggacagcaac
ctgaaccgggtgtcggtcatccagttccaggaggagaccaagggagaggaggaggaggac
gacgaagcggccgcagagagaaggggtctccatcgccgagctacgccccaccccagtgag
ctgaaagtgatgaagaaggtgatcgaggagcgaaggaacgaggcctactcctccaggcct
gacggggagccagactctcctgatcaccaggggaagcggctaagcgacctgtccaatcag
agccaggaatcccaggcttccaacagcacagtctcggctaactcccatgaggaaaggcgg
ggattaaccacccagggggaggagctagccgacggccacgcctaccaggaggatctggat
gagatggaggtggagtacatcgagcccaccgtccacttcgccgaggagccaatcacctgc
ggcggcggcgagcgcgatgacgacgacgacgaagaggaggaggagggcgaccgtagcgac
gaggagggcgagcggcggcccgcggcggccgagaagcagcggctgatccgcaaggacacg
ccgcactacaagaagcacttcaagatcaccaagctgcccaagcccgaggcggtggccgcg
ctgctgcagggcttcaccccggagagcctcctcccgccgccgccacggccccaccaggag
tcccgcccccaggaggaggaggaggaggagccggaggagggggagggggagggggagggg
ggtcccgttacgccagagcgagagaagcaccacaggccacaggaggcccagctcgaggac
agtcggctccaggtcaacaccagccaagctaagggggtgtcctttgatcaagtcaataat
ctgctgattgaacctgctcgaattgaggaggaagagcacactctgaccatcctacggcag
actgggggtctggggatcagcatcgcaggagggaagggctccacgccctacaagggggac
gatgagggaatcttcatctcgcgggtgtcagaggagggccctgcagccagagcgggggtc
aaagtgggagacaaactacttgaggtgaacgccgtggacctccagggcgccgagcaccac
acggcggtcgaggcgctgcgcagctcgggcgccgccgtctccatgtccatcctgcgggag
cacatggtggagccggagaacgccatcaccaccacgccgctgcggcccgagggcgaccac
ttcccccgggagcggcggagcagcgggctgcccttcctggtggagcccgtccccgccccg
ccccggacgcggctcagcgcctgcctcgtgcgcaacgacaagggcctgggcttcagcatc
gcagggggcaggggctccacgccctaccgcaccgccgacacggggatctacatctcccgt
atcgcagagggaggggccgccagccgggacagcacgctacgcgtcggagacagagtttta
tccatcaatggtgtagacatgacagaggccagacatgaccaggcagtagctcttcttact
ggcacctcccccaccatcgccctcgtggtggagcgggaccagaccgcccctggggggtcc
ccgggtctgtcccggggccgcgcccactccccgcctcccccagagccctccgactccccc
gacaacgaggaccccacggaggacggcctgtcgccgcagggcaaccacctgaaccgcctg
gaggatgagtatcccatagaggaagtgattctggtgaagtcaggcggtcctctgggactc
agcatcgtggggggtagcgaccatgccagccaccccttcggcatcaacgaacccggggtc
ttcatctcaaaggtgatccccgagggcctggcgtgtcagagcgggctgcgtgtgggcgac
cgcatcctggaggtgaacaccatggacatgcgccacgccacccaccaggaggcggtccga
gccctgctcgccaacaagcaggagatccgcctgctggtccgccgggacccctccccgccc
ggcatggaggagatagtgatccagaagcagcccggggagaagctgggcatcacaatccgg
ggaggggccaagggccacgcggggaaccccttcgatgccactgatgagggcatcttcatc
tccaaggtgaactccagcggcgcagcagccagggacggccggctgcaggtgggcatgcgc
atcctggaggtcagcaaccacagcctgctgggcatgacccacacggaggcggtgcgcgtg
ctgcgggccgtgggcgacaccctggtcatgctggtgtgtgacggctttgacccgcaaacg
gtggcaggcgtggaggcctcccctggaatcatcgccaacccctttgtgacgggcatcgtc
cgtaagaacagcttggagagcatctcgtccatagaccgggacctcagcccggaggagata
gacatcatggagaaggagtcagagatggtgcgagagacctcccagtgggagagagaagag
atggagaaagtggagcgcatgcgtttggagcgcgaggaggcaactcgcctgttggaggag
gagacggagaacgtcggggcgggacctttgaagctggactacaagacgctcgccgctctg
ccgacaaccagtctccagaaggtcaacaggttttcccctccgctcagccgttctgatccc
atggaggccgtcgtgcaggcccagtgccttccctcactagagcccctgggctttggcctg
ggtcacccctccgaaaccctctaccccacggacccccaagacacccccctctaccccagc
gacccccacgccgcctccctctgccccacggacccccaggccctccccggtatgacccag
gagaacagcctgctccacgcctcccccccgtcccccgacgtgacctccttcagccagagc
gacgccaccatctccctggcctccacaggcacctccctgaacggcgaggaggacgaggac
gagtgcctggtggagacgcagtccatctgcttcagcgagaaccccttcctggtggccaat
cgcagggggaagggccgcccccccgccgagcgcatcctatcgggtccccctgtcgggtac
ggcagggggggcaagctacagccctggatgtacaccaagacatctagctccgatctgcca
cgcactgccagcccggtgagggacggctcctactcccccagcatccagccggccaacgtt
cactacagctccccgggccccaccgcccgggacagcagcccctcatctacccgcccgggg
gcgatccagccggcgggccgggtttggtccaccccgtccccggccacgcccgacgccagc
agccccaaccccttccagcatggcccctcccccatcaactctcagacctctcctcgcggc
ccctcccccgtctcccacggcgacttccccatgaatatcaagcaggcgtacaaggcgttt
gccgccgtgcctcacgcgccggccacgctggagccaccacaggacctgtacggcgggagg
aaccacgtccagcaggcgtcttctcctgagtcggcgcggttcagcgaggtatttgaggac
gccgtagacgggggggaggggggcgggggggcgaggtccccgtgccccccggaccaccgg
gactaccagagcatggcggccgtgccccgcttctccaggccctccatggtgccccagacg
ccctccccggggggtccggacaccccggagcagcgctccttccgggaccgccagaagtac
tttgagatcgacgtgaagcagacgacgccggacaaacccaagccccgcgtgtcgctggtc
ggagccgacgacctgaagaagatgagggaggaggaagagcggcggtttgagcagcgggcg
cgggagtacctgatggacgacgaggacgacgatgacgatgatgacctggcccacatgaag
gccaccgggaaggtgctcctggacggggtggagtaccgcgtggagcccctcgccaccacc
acccgcctcccctccaccccggggtacaacgccacttcccccggctacgcctccacgccc
cccggctacgcctccacgccccccggttacgcctccacgccccccggttacgcctcgacc
ccacctggctacacctccacttccccgggctacacctccacgccccccggctactacagc
ggctcaggagcgtcctcagtggacgggaagggagaatcccagaggaactccctggaggac
gggttcaggttggaccagcggcccacctccatgaccgggctcgtccctgcctacaccgct
gagccggccgtggcgccggtccgcacggcgaaggccgagcggcgccaccaggagcgtctg
aggctgcagagcccggagctggcggcggcggccccggaccaggacctctcccccgccgag
aaacgggctctggaggccgagaagagggccatgtggcgggcagcgcggatgaagtctctg
gagcaggacgccctgaaggcccagatggtcatcgccaagtccaaggagggcaagaagcgc
ggcacgctggaccaactgacggagtcgccgtcccccgcccccaccccctcccccaccccc
atggaagaactcatccctcgaggagtcacctcccccggcagactgtccgtgtcgtctaag
aagtttgactaccgacagttcgcagccattccttcttccaaacctgtttacgacatccag
tcacctgacctggtggatgagccctgcttcatagacgacggcaccagcagcccggtagca
gctgtgaacccagaggaggcggatgcgggcccggaggaggtgtcgctgtacagcaacaaa
cgcaagctgagacagggccgccacagcctggaagccgccgtccccacatag
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