KEGG   Gadus morhua (Atlantic cod): 115537017
Entry
115537017         CDS       T10832                                 
Name
(RefSeq) coronin-1A-like
  KO
K13882  coronin-1A
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04145  Phagosome
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115537017
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmh04131]
    115537017
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gmh04812]
    115537017
   04147 Exosome [BR:gmh04147]
    115537017
Membrane trafficking [BR:gmh04131]
 Endocytosis
  Phagocytosis
   Coronins
    115537017
Cytoskeleton proteins [BR:gmh04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     115537017
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115537017
SSDB
Motif
Pfam: DUF1899 WD40 WD40_4 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_EIPR1 Beta-prop_EML ANAPC4_WD40 WDCP Beta-prop_IFT140_1st WDR90_beta-prop_4th WD40_RFWD3 NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 DUF6779
Other DBs
NCBI-GeneID: 115537017
NCBI-ProteinID: XP_030204462
Ensembl: ENSGMOG00000013567
LinkDB
Position
2:complement(1967707..1977025)
AA seq 457 aa
MSRKVVRSSKFRHVFGQGLKADQCYDDIRISQMTWDSNFCTVNPKFVAMIVDASGGGSFI
VLPLSKTGRIDMSYPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPEGGLTSPL
SEPVVKLEGHSKRVGILSWHPTAHNVLMTAGCDNVLILWNVARGQEMVRMDTVHTDLIYS
ACWNRDGSQILTACKDKTLRVLDPRKGTVITEKEKPHEGSRPVRALFVSDNKILSTGFSR
MSERQVALWDPNRFGEPLTLQELDTSSGVLLPFFDPDTGIVFLCGKGDTSIRYFEITDEA
PFVHYLSMYSGKESQKGMGYMPKRGLEVNKCEIARFYKLHDRKCEPVVMTVPRKSDLFQE
DLYPNTIGPEPSVEADDWFDGKDGQPIMISLKDGIAAPTKSSEFKLNKTLLKSTTVCVGD
QGNRGGEIESLRNEVKQLREALEALTKTVNDLQPKQQ
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgtcccggaaggtggtgaggtccagtaagttccgccatgtcttcggccagggcctgaag
gccgaccagtgctacgatgacatccgcatctcccagatgacgtgggacagcaacttctgc
accgtcaaccccaagttcgtggccatgatcgtggacgccagtggtggagggtccttcatc
gtgctgcccctgagcaagacgggacgtattgatatgtcctaccccacagtgtgcggccac
actggtcccgttctggacatcgagttctgcccccacaacgacaacatcatagccagcggg
tccgaggactgcagtgtgatgatctgggagatcccagagggaggtctgacctcgcccctg
agcgaaccggtggtgaagctggagggccactctaagagggtgggcatcctgagctggcac
cccaccgcccacaacgtgctcatgaccgcaggctgcgacaacgtactgatcctgtggaac
gtggcccgcggacaggagatggtgcggatggacaccgtgcacaccgacctcatctacagc
gcctgctggaaccgggacggctcccagatcctgaccgcctgcaaggacaagaccctgcgt
gtcctggacccccgcaagggcaccgtgatcacggagaaggagaagccccacgagggctcc
cggcccgtcagggccctgttcgtgtccgacaacaagatcctcagcacgggcttcagccgc
atgagcgagaggcaggtggccctctgggacccgaaccgtttcggggagcccctcacactt
caggagctggacaccagcagcggcgttctgctgccgttcttcgacccagacaccggcatc
gtcttcctgtgtggcaagggggacaccagtatccgctacttcgagatcaccgacgaggcg
ccgttcgtccactacctctccatgtacagcggcaaggagagccagaagggcatgggctac
atgcccaagagaggcctggaggtcaacaaatgtgaaatagcaagattctataagctccac
gacaggaagtgtgaaccagttgtcatgaccgtgccccgcaagtctgacctcttccaggag
gacctgtaccctaacacgattggtccagagccgtcggtggaggcagacgattggtttgac
ggcaaagacggccagcccataatgatttccctgaaagacggcattgctgccccgaccaaa
tccagcgagttcaaattgaacaagactctcctgaagagcacgaccgtctgcgtcggagac
cagggaaacagaggaggggagattgaaagcttacggaacgaagtgaagcagttgagagag
gctttggaggcgctgaccaagacggtgaatgatctccagcccaagcagcagtag

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