KEGG   Gadus morhua (Atlantic cod): 115537034
Entry
115537034         CDS       T10832                                 
Symbol
drosha
Name
(RefSeq) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    115537034 (drosha)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmh03019]
    115537034 (drosha)
   03009 Ribosome biogenesis [BR:gmh03009]
    115537034 (drosha)
   03036 Chromosome and associated proteins [BR:gmh03036]
    115537034 (drosha)
Enzymes [BR:gmh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     115537034 (drosha)
Messenger RNA biogenesis [BR:gmh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     115537034 (drosha)
Ribosome biogenesis [BR:gmh03009]
 Eukaryotic type
  90S particles
   RNase
    115537034 (drosha)
 Prokaryotic type
  rRNA processing factors
   115537034 (drosha)
Chromosome and associated proteins [BR:gmh03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     115537034 (drosha)
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 dsrm RM44_endonuclase
Other DBs
NCBI-GeneID: 115537034
NCBI-ProteinID: XP_030204487
Ensembl: ENSGMOG00000036656
LinkDB
Position
23:complement(23022651..23144487)
AA seq 1406 aa
MSYHQGRGGSRPGLPPGQHGSQPNYRPSNLRPLPPHTPPSSYHYSPQTHPNAGYQGNSGG
GFMPPPPPMPHSDFMSYPPPGTNMSPGALGPGSMRPPFPKPPVRQGGFPEPPPNFPPPPL
PSLANPSAGPGAQPSTHNPYAYMMPPGMPPPAPHPPMPPAMPAQPGGYQQAPYSVGYHQH
HHQQPPPFPPPTFSPGYSPGGGAGAGGPGPGPGWFKPDPGFRPGGQYKYEKPPDCTPHRH
DDQPNRQKSYGYGGGGGGGDRGKTEFSAERKERSPDRRGRPEAAGRYRSDYDRGRTPPRH
RSRERSRYSDSSSERHRHRDSRRSPSPDRQRKRQRSRSNSREKKRSRWEGEGGRREGEGG
RRSESSGPGRERSSFSSARSRDSEDSYAERDRERDRERERERDKERERERERERERESSQ
REKGEEVKDEEELLKPAWIRCTHAENYYSNDPMDQVGDSTVVGTSKLRALYERFEEELIQ
RQERAKAARPKWEPPQTKLDEEPGCPGDESSSDTECESDGEGSSCSSSSDSDVFDVIAEI
KRKKAHPDRLHEELWYNDPGQMNDGPLCKCSARARRTGIRHSIYPGEEPAKTCRLMNNNS
GKLYHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFSHTPLTSIPLCRVIRFNIDYT
IHFIEEMTPENYCVQGLELFASYLFQDVLELYDWNLTGPDWDNLDPGCQKFHFMPRFVRF
LPDGGKEVLSMHQVLLYLLRSSKPLVPEEEIADMLQWEETAWQKYAEECKGMIVTNPGMK
PSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSP
KVKQIDKQKLTQREEALQKIRQKNTMRREVTVELSSQGFWKTGVRSDVCQHAMMLPVLTH
HIRYHQCLMHLDKLIGYVFKERCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYG
DRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAVVEFLTSVHLYYLF
PCLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALI
GAVYLEGGLEEAKTLFGRLLFNGEDMREVWLNYPPHPLQVQEPQTDRQLIETSPVLQKLT
DFEGAIGVPFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPD
HHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAAL
YIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQ
TVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKY
RQELKEMRRERERQEKEGDDADESRK
NT seq 4221 nt   +upstreamnt  +downstreamnt
atgtcttaccaccagggccgtggcggttctcgtccgggcttacccccgggtcagcacggg
tcccaaccgaactaccgacccagcaacctccgacccctgcctccccacacccccccgtcg
tcttaccactacagccctcaaacccatcccaacgccggttaccaaggcaacagcggcgga
ggcttcatgccgccgccgccgccgatgccgcactccgacttcatgtcgtacccgccgccc
gggacgaacatgtctcccggcgccctgggtccgggctccatgcgcccgcccttccccaag
ccccccgtccggcagggggggttcccggagcctccgcccaacttcccgccgccgccgctg
ccgtctctcgccaacccctcggccggccccggggcccagccgtcgacccataacccctac
gcctacatgatgcccccgggcatgcccccgccggcgccccacccccccatgccgcccgcc
atgcccgcgcagcccggcggctaccagcaggcgccgtactcggtgggctaccaccagcac
caccaccagcaacccccgccgttcccgccgccgacgttcagccccgggtactcccctggc
ggtggggccggcgccggggggccgggcccgggccccggctggttcaaaccagaccccggc
ttcagaccagggggccagtacaagtacgagaagccgccggactgcaccccgcatcgccac
gacgaccagcccaaccggcagaagagctacgggtacggcggcggcggcggcggcggggac
cgaggcaagacggagttcagcgcggagcggaaggagaggagtcccgaccggcgggggagg
ccggaggccgccggtcgataccggtccgactacgaccgcggtcggaccccgcccagacac
cggagcagggaacgcagccgctactctgacagcagctcggaaaggcatcgacacagagac
agccgcaggtccccgtctcctgacagacagaggaaacggcagcgaagccgctccaacagc
agggagaagaagaggagtcggtgggagggggagggggggcggcgggagggggaggggggc
cggcggtccgagagctccgggcccggccgggagaggagcagcttctcctccgcccggagc
agggacagcgaggactcgtacgccgagcgcgaccgggagcgagaccgcgagagggagcgg
gagagagacaaggagcgggagagagagagggagagggagcgggagcgagagagcagtcag
agggagaagggggaggaggtgaaggacgaggaggagctgctgaaaccggcctggatccgc
tgcacccacgccgagaactactactccaacgaccccatggaccaagtgggggactccaca
gtggtcggcaccagcaagctgcgggctctgtacgagcgcttcgaggaggagctgatccag
aggcaggagagggccaaggcggcgcggcccaaatgggaacccccccagacgaaactggac
gaggagccggggtgtccaggagacgagagcagcagcgacacggagtgcgagtcggacggc
gagggcagcagctgctccagcagctcggactccgacgtgttcgacgtcatcgccgagatc
aagaggaagaaggcccaccccgaccggctgcacgaggagctgtggtacaacgaccccgga
cagatgaacgatgggcctctgtgtaagtgcagcgccagggccagacgcaccgggatccgc
cacagcatctaccccggggaggagcctgcgaagacatgtcggctaatgaacaacaattct
gggaagctgtaccactacaggatcactgtgtctccgcccaccaacttcctgaccgaccgg
cccactgtgatcgagtacgacgaccacgagtacctgtttgagggcttctccctcttctcc
cacacccctctgaccagcatcccattgtgtcgtgtgatccgcttcaacatagattacacc
attcacttcatagaagagatgacgccagagaactactgcgtccaggggctggagctcttc
gcctcctacctcttccaggatgtcctggagctgtacgactggaacctgacaggccccgac
tgggacaacctggatcctggctgccagaagttccacttcatgccccgcttcgtgcgcttc
ctcccggacggtgggaaggaggtgctgtccatgcaccaggtgctcctctacctgcttcgc
agcagcaagccgctggtgcctgaggaggagatcgccgacatgctgcagtgggaggagacg
gcctggcagaagtacgccgaggagtgcaagggcatgatcgtcaccaaccccggcatgaag
cccagctcggtgcgcattgaccagctggaccgggagcagttcaacccggacgtcatcacc
ttccctatcatcgtccactttggcatccgtccggcccagctcagctacgccggagacccc
cagtaccagaagctgtggaagagctatgtgaaactgcgccacctgctggccaacagcccc
aaggtcaagcagatcgacaagcagaagctgacgcagagagaggaagcgctccagaagatc
cggcagaagaacacgatgcgtagggaggtgacggtggagctgagtagccagggcttctgg
aagaccggcgtgcgctcagacgtctgccagcatgccatgatgctgcccgtcctcacccac
cacatccgataccaccagtgcctgatgcacctggacaagctcatcggctacgtcttcaag
gagcgctgtctgctgcagctggccatgacccaccccagccaccacctgaacttcgggatg
aacccggaccatgcccgcaactccctgtccaactgcggcatccgccagcccaaatacgga
gaccgcaaggtccaccacatgtacatgaggaagaagggcatcaacaccttgataaacatc
atgtcccgcctgggccaggacgacccctccccctccaggatcaaccataacgagcgcctg
gagttcctaggagacgccgtggtggagttcctcaccagcgtccacctgtactacctgttc
ccctgcctggaggagggcgggctggccacctacaggaccgccatcgtgcagaaccagcac
ctggccatgctggccaagaaactggagctggatcggttcatgctgtacgcccacggaccg
gacctgtgccgcgagtcggatctccgccacgccatggccaactgcttcgaagccctcatt
ggtgcggtgtatctggagggaggactggaggaggccaaaacactctttgggagactgctg
ttcaacggagaggatatgcgcgaggtctggctcaactacccaccccaccccttgcaggtc
caggagccgcagacagaccggcagctgatcgagacgtcgccggtgctgcagaagctaacc
gacttcgagggcgccatcggggtccccttcacccacgtgcgtctcctggcgcgggccttt
accctgcggaccgtgggcttcaaccacctcaccctgggtcacaaccagagaatggagttc
ctgggtgactccatcatgcagctggtggccacagagtacctcttcatccacttccctgat
caccatgaagggcacctgacgctgctgcgcagttcgctggtcaacaaccgcacacaggcc
aaggtggcggaggagctgggcatgcaggagttcgccatcaccaacgacaagaccaagagg
cccgtagcgctgcgcaccaagaccctggccgacctgctggaatcgttcattgcagccctc
tacatcgacaaggacctggagtacgtgcacaccttcatgaacgtctgcttcttcccccgg
ttgaaggagttcattctgaaccaagactggaacgatcccaaatcccagctgcagcagtgc
tgtttgaccctgaggacagagggcaaggagcctgacatccccctttacaagaccctgcag
accgtggggccgtcccacgcccggacctacaccgtggccgtctacttcaaaggggagcgc
atcggctgtggaaagggcccgagcatccaacaggcagaaatgggcgccgccatggacgca
ctggagaaatataacttcccgcagatggctcatcagaagcgcttcatcgagcggaagtac
aggcaggagctaaaggagatgagacgggagcgggaacgccaggagaaggagggcgacgac
gccgacgagagccggaagtga

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