Gadus morhua (Atlantic cod): 115537034
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Entry
115537034 CDS
T10832
Symbol
drosha
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115537034 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmh03019
]
115537034 (drosha)
03009 Ribosome biogenesis [BR:
gmh03009
]
115537034 (drosha)
03036 Chromosome and associated proteins [BR:
gmh03036
]
115537034 (drosha)
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
115537034 (drosha)
Messenger RNA biogenesis [BR:
gmh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
115537034 (drosha)
Ribosome biogenesis [BR:
gmh03009
]
Eukaryotic type
90S particles
RNase
115537034 (drosha)
Prokaryotic type
rRNA processing factors
115537034 (drosha)
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
115537034 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
115537034
NCBI-ProteinID:
XP_030204487
Ensembl:
ENSGMOG00000036656
LinkDB
All DBs
Position
23:complement(23022651..23144487)
Genome browser
AA seq
1406 aa
AA seq
DB search
MSYHQGRGGSRPGLPPGQHGSQPNYRPSNLRPLPPHTPPSSYHYSPQTHPNAGYQGNSGG
GFMPPPPPMPHSDFMSYPPPGTNMSPGALGPGSMRPPFPKPPVRQGGFPEPPPNFPPPPL
PSLANPSAGPGAQPSTHNPYAYMMPPGMPPPAPHPPMPPAMPAQPGGYQQAPYSVGYHQH
HHQQPPPFPPPTFSPGYSPGGGAGAGGPGPGPGWFKPDPGFRPGGQYKYEKPPDCTPHRH
DDQPNRQKSYGYGGGGGGGDRGKTEFSAERKERSPDRRGRPEAAGRYRSDYDRGRTPPRH
RSRERSRYSDSSSERHRHRDSRRSPSPDRQRKRQRSRSNSREKKRSRWEGEGGRREGEGG
RRSESSGPGRERSSFSSARSRDSEDSYAERDRERDRERERERDKERERERERERERESSQ
REKGEEVKDEEELLKPAWIRCTHAENYYSNDPMDQVGDSTVVGTSKLRALYERFEEELIQ
RQERAKAARPKWEPPQTKLDEEPGCPGDESSSDTECESDGEGSSCSSSSDSDVFDVIAEI
KRKKAHPDRLHEELWYNDPGQMNDGPLCKCSARARRTGIRHSIYPGEEPAKTCRLMNNNS
GKLYHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFSHTPLTSIPLCRVIRFNIDYT
IHFIEEMTPENYCVQGLELFASYLFQDVLELYDWNLTGPDWDNLDPGCQKFHFMPRFVRF
LPDGGKEVLSMHQVLLYLLRSSKPLVPEEEIADMLQWEETAWQKYAEECKGMIVTNPGMK
PSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSP
KVKQIDKQKLTQREEALQKIRQKNTMRREVTVELSSQGFWKTGVRSDVCQHAMMLPVLTH
HIRYHQCLMHLDKLIGYVFKERCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYG
DRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAVVEFLTSVHLYYLF
PCLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALI
GAVYLEGGLEEAKTLFGRLLFNGEDMREVWLNYPPHPLQVQEPQTDRQLIETSPVLQKLT
DFEGAIGVPFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPD
HHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAAL
YIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQ
TVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKY
RQELKEMRRERERQEKEGDDADESRK
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccaccagggccgtggcggttctcgtccgggcttacccccgggtcagcacggg
tcccaaccgaactaccgacccagcaacctccgacccctgcctccccacacccccccgtcg
tcttaccactacagccctcaaacccatcccaacgccggttaccaaggcaacagcggcgga
ggcttcatgccgccgccgccgccgatgccgcactccgacttcatgtcgtacccgccgccc
gggacgaacatgtctcccggcgccctgggtccgggctccatgcgcccgcccttccccaag
ccccccgtccggcagggggggttcccggagcctccgcccaacttcccgccgccgccgctg
ccgtctctcgccaacccctcggccggccccggggcccagccgtcgacccataacccctac
gcctacatgatgcccccgggcatgcccccgccggcgccccacccccccatgccgcccgcc
atgcccgcgcagcccggcggctaccagcaggcgccgtactcggtgggctaccaccagcac
caccaccagcaacccccgccgttcccgccgccgacgttcagccccgggtactcccctggc
ggtggggccggcgccggggggccgggcccgggccccggctggttcaaaccagaccccggc
ttcagaccagggggccagtacaagtacgagaagccgccggactgcaccccgcatcgccac
gacgaccagcccaaccggcagaagagctacgggtacggcggcggcggcggcggcggggac
cgaggcaagacggagttcagcgcggagcggaaggagaggagtcccgaccggcgggggagg
ccggaggccgccggtcgataccggtccgactacgaccgcggtcggaccccgcccagacac
cggagcagggaacgcagccgctactctgacagcagctcggaaaggcatcgacacagagac
agccgcaggtccccgtctcctgacagacagaggaaacggcagcgaagccgctccaacagc
agggagaagaagaggagtcggtgggagggggagggggggcggcgggagggggaggggggc
cggcggtccgagagctccgggcccggccgggagaggagcagcttctcctccgcccggagc
agggacagcgaggactcgtacgccgagcgcgaccgggagcgagaccgcgagagggagcgg
gagagagacaaggagcgggagagagagagggagagggagcgggagcgagagagcagtcag
agggagaagggggaggaggtgaaggacgaggaggagctgctgaaaccggcctggatccgc
tgcacccacgccgagaactactactccaacgaccccatggaccaagtgggggactccaca
gtggtcggcaccagcaagctgcgggctctgtacgagcgcttcgaggaggagctgatccag
aggcaggagagggccaaggcggcgcggcccaaatgggaacccccccagacgaaactggac
gaggagccggggtgtccaggagacgagagcagcagcgacacggagtgcgagtcggacggc
gagggcagcagctgctccagcagctcggactccgacgtgttcgacgtcatcgccgagatc
aagaggaagaaggcccaccccgaccggctgcacgaggagctgtggtacaacgaccccgga
cagatgaacgatgggcctctgtgtaagtgcagcgccagggccagacgcaccgggatccgc
cacagcatctaccccggggaggagcctgcgaagacatgtcggctaatgaacaacaattct
gggaagctgtaccactacaggatcactgtgtctccgcccaccaacttcctgaccgaccgg
cccactgtgatcgagtacgacgaccacgagtacctgtttgagggcttctccctcttctcc
cacacccctctgaccagcatcccattgtgtcgtgtgatccgcttcaacatagattacacc
attcacttcatagaagagatgacgccagagaactactgcgtccaggggctggagctcttc
gcctcctacctcttccaggatgtcctggagctgtacgactggaacctgacaggccccgac
tgggacaacctggatcctggctgccagaagttccacttcatgccccgcttcgtgcgcttc
ctcccggacggtgggaaggaggtgctgtccatgcaccaggtgctcctctacctgcttcgc
agcagcaagccgctggtgcctgaggaggagatcgccgacatgctgcagtgggaggagacg
gcctggcagaagtacgccgaggagtgcaagggcatgatcgtcaccaaccccggcatgaag
cccagctcggtgcgcattgaccagctggaccgggagcagttcaacccggacgtcatcacc
ttccctatcatcgtccactttggcatccgtccggcccagctcagctacgccggagacccc
cagtaccagaagctgtggaagagctatgtgaaactgcgccacctgctggccaacagcccc
aaggtcaagcagatcgacaagcagaagctgacgcagagagaggaagcgctccagaagatc
cggcagaagaacacgatgcgtagggaggtgacggtggagctgagtagccagggcttctgg
aagaccggcgtgcgctcagacgtctgccagcatgccatgatgctgcccgtcctcacccac
cacatccgataccaccagtgcctgatgcacctggacaagctcatcggctacgtcttcaag
gagcgctgtctgctgcagctggccatgacccaccccagccaccacctgaacttcgggatg
aacccggaccatgcccgcaactccctgtccaactgcggcatccgccagcccaaatacgga
gaccgcaaggtccaccacatgtacatgaggaagaagggcatcaacaccttgataaacatc
atgtcccgcctgggccaggacgacccctccccctccaggatcaaccataacgagcgcctg
gagttcctaggagacgccgtggtggagttcctcaccagcgtccacctgtactacctgttc
ccctgcctggaggagggcgggctggccacctacaggaccgccatcgtgcagaaccagcac
ctggccatgctggccaagaaactggagctggatcggttcatgctgtacgcccacggaccg
gacctgtgccgcgagtcggatctccgccacgccatggccaactgcttcgaagccctcatt
ggtgcggtgtatctggagggaggactggaggaggccaaaacactctttgggagactgctg
ttcaacggagaggatatgcgcgaggtctggctcaactacccaccccaccccttgcaggtc
caggagccgcagacagaccggcagctgatcgagacgtcgccggtgctgcagaagctaacc
gacttcgagggcgccatcggggtccccttcacccacgtgcgtctcctggcgcgggccttt
accctgcggaccgtgggcttcaaccacctcaccctgggtcacaaccagagaatggagttc
ctgggtgactccatcatgcagctggtggccacagagtacctcttcatccacttccctgat
caccatgaagggcacctgacgctgctgcgcagttcgctggtcaacaaccgcacacaggcc
aaggtggcggaggagctgggcatgcaggagttcgccatcaccaacgacaagaccaagagg
cccgtagcgctgcgcaccaagaccctggccgacctgctggaatcgttcattgcagccctc
tacatcgacaaggacctggagtacgtgcacaccttcatgaacgtctgcttcttcccccgg
ttgaaggagttcattctgaaccaagactggaacgatcccaaatcccagctgcagcagtgc
tgtttgaccctgaggacagagggcaaggagcctgacatccccctttacaagaccctgcag
accgtggggccgtcccacgcccggacctacaccgtggccgtctacttcaaaggggagcgc
atcggctgtggaaagggcccgagcatccaacaggcagaaatgggcgccgccatggacgca
ctggagaaatataacttcccgcagatggctcatcagaagcgcttcatcgagcggaagtac
aggcaggagctaaaggagatgagacgggagcgggaacgccaggagaaggagggcgacgac
gccgacgagagccggaagtga
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integrated database retrieval system