KEGG   Gadus morhua (Atlantic cod): 115537051
Entry
115537051         CDS       T10832                                 
Symbol
itgb1
Name
(RefSeq) integrin beta-1 isoform X1
  KO
K05719  integrin beta 1
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03271  Virion - Rotavirus
gmh04145  Phagosome
gmh04510  Focal adhesion
gmh04512  ECM-receptor interaction
gmh04514  Cell adhesion molecules
gmh04530  Tight junction
gmh04810  Regulation of actin cytoskeleton
gmh04820  Cytoskeleton in muscle cells
gmh05100  Bacterial invasion of epithelial cells
Brite
Membrane trafficking [BR:gmh04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    115537051 (itgb1)
Exosome [BR:gmh04147]
 Exosomal proteins
  Proteins found in most exosomes
   115537051 (itgb1)
Cell adhesion molecules [BR:gmh04515]
 Integrins
  Integrin beta subunits
   115537051 (itgb1)
CD molecules [BR:gmh04090]
 Proteins
  115537051 (itgb1)
SSDB
Other DBs
NCBI-GeneID: 115537051
NCBI-ProteinID: XP_030204517
Ensembl: ENSGMOG00000002809
LinkDB
Position
23:complement(13386689..13417434)
AA seq 806 aa
MMELKLLLIATLLGVFCCSISRAQKEGNECINANAKYCGECIQAGAKCGWCRHPDFLKQG
EAVSSRCDELQSLLIRGCSLADIENPRGGQRVLLDRPVTNRLKGADKLRLENITQIQPQK
LAITLRAGEPQSFNLKFKRAEDYPIDMYYLMDLSYSMKDDLENVKNLGTSLMQEMTKITS
DFRIGFGSFVEKTVMPYISTTPAKLLNPCTGGLNCTSPFSYKNVLKLTSDGKRFNTLVGK
QQISGNLDSPEGGFDAIMQVAVCGDQIGWRTDVTRLLVFSTDAGFHFAGDGKLGGIVLPN
DGKCHLENNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAV
GTLSANSSNVINLIIDAYNSLSSEVILENSKLPEGLTIAYTSLCKNGIVSEGENGRKCSN
ISIGDEVMFTIDVTATGCPKMGKPETIKIKPLGFNEEVEITLNFICECDCSSGGIADSDN
CTLGNGTLECGACKCNPGRVGRNCECSSNEVATEDMDRTCRRDNSTDLCSNNGECVCGAC
ECKKRDNADERYSGPFCECDNFNCDRSNSLLCGGNGLCICRECICKPNWKGSACDCSLDH
STCMASNKQICNGRGTCECGACKCTDPKFQGLTCETCPTCPGVCIEHKDCVQCRTFGTGE
KAERCQEDCSEFSLVKVKDRGELPQPNDAAYPVMHCKERDANDCWFYYTYAVNNNTKEVH
VVDKLECPTGPDIIPIVLGVVVGIVLIGLALLLIWKLLMVIHDRREFAKFEKEKLNAKWD
TQENPIYKSPINKFQNPNYGRKAPVL
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgatggagctcaagctgcttttgatagccaccctgctgggtgtgttttgttgcagtatc
agtcgtgctcagaaagaggggaatgagtgcatcaatgccaatgctaagtactgcggggaa
tgcatccaggctggagccaaatgtggatggtgccgacacccagacttcctgaaacaaggg
gaggcggtgtccagccgctgcgacgagctgcagtcccttctgatccgcggctgcagcctc
gccgacatcgagaacccccgcggcggccagcgtgtcctcctggacaggccagtgaccaac
cgcctcaagggggcggacaagctgaggctggagaacatcacccagatccagccccagaag
ctcgccatcaccctcagggccggggagccccagtcgttcaacctgaagttcaagcgggcc
gaggactaccccatcgacatgtactacctcatggacctgtcctactccatgaaggacgac
ctggagaacgtcaagaacctgggcaccagcctgatgcaggagatgaccaagatcacctcc
gacttcaggataggctttggctccttcgtggagaagacggtcatgccttacatcagcacc
acgccggccaaactcctcaacccgtgcaccggcggcctcaactgcaccagccccttcagc
tacaagaacgtgctgaagctcaccagcgacggcaaaaggttcaacacgctggtgggcaag
cagcagatctctgggaacctggactcccccgaggggggcttcgacgccatcatgcaggtg
gcggtgtgcggggaccagatcggctggaggaccgacgtgacccgcctactggtgttctcc
accgacgccggcttccatttcgccggcgacggcaagctgggaggcatcgtgctgcccaac
gacgggaagtgtcacctggagaacaacatgtacacgatgagccactactacgactatcca
tccatcgctcatctggttcagaagctgagcgacaacaatatccagaccatcttcgccgtc
acggaggaattccagccggtgtataaagagctgaaaaacctgatacccaagtctgcagtc
ggaactttgtctgccaactccagcaatgtgataaacctgattatcgatgcctacaattcg
ctctcctccgaggtcattctggagaacagcaagctgccggaaggactgaccatagcctac
acgtctctctgcaagaacggcatcgtcagcgagggggagaatggacgcaagtgctccaac
atctccatcggcgatgaggtgatgttcaccatcgacgtgacggccacgggctgtcccaag
atgggcaagccggagaccattaagatcaagccgctgggcttcaacgaggaggtggagatc
acgttgaacttcatctgcgagtgcgactgcagcagcggcggcatcgccgacagcgacaac
tgcaccttaggcaacggcaccctagagtgcggagcctgcaagtgcaacccaggccgcgtg
ggccggaactgcgagtgcagcagcaacgaggtggccacggaggacatggaccggacctgc
cgcagagacaacagcaccgacctgtgcagcaacaacggggagtgcgtgtgcggggcgtgc
gagtgcaagaagcgggacaacgcggacgagcgctacagcgggcccttctgcgagtgcgac
aacttcaactgcgaccgctccaacagcctgctgtgtggaggcaacggcctatgcatatgc
agagagtgcatctgcaaacccaactggaagggcagcgcctgtgactgctctctggaccac
agcacatgcatggccagcaacaagcagatctgcaacgggcgggggacctgtgagtgtggc
gcctgcaagtgcacagaccccaagttccagggactcacctgtgagacctgccctacctgc
cctggagtgtgcatcgaacacaaggactgcgtgcagtgccggacgttcggcaccggggag
aaggcggagcgctgccaggaggactgcagcgagttctcgctggtcaaggtgaaggaccgc
ggcgagctgccccagcccaacgacgcagcctaccccgtcatgcactgcaaggagcgcgac
gccaacgactgctggttctactacacctacgccgtcaacaacaacaccaaggaggtgcac
gtggttgacaagctcgagtgccccaccggtcccgacatcattcccatcgtgctgggcgtg
gtcgttggcatcgtactgataggcttagccctgctgttgatctggaagttgctgatggtc
atccacgaccggagggagttcgccaagtttgagaaggagaagttgaatgcaaagtgggac
acgcaagagaaccccatttacaagagtcctatcaataagttccagaatccaaactatggc
cgtaaagctcctgtcctttaa

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